| Chain sequence(s) |
A: TIPAIRTPESNFDGLVGDPFEDNYIDDLPGFEGLRIHYWRVGPEDAEKTVLMLHGEPTSAYSWRTMIPVFADAGYTVYAPDFLGFGRSDRPVREEDYTYTFHLNQLLAFIDKLDLKNIILFVQDWGGFIGLNLPMYDPSRFVGLIITNACLLVPEELAPEFTAFRTEPADGFPLWKERIVTPENLDLAAFMKEEAPTLTDAEAANYQAPFPDPSYMAAVRKFPKMVENPDKETIEISTKAIDFWKNDWKGKVFMAVGEQDKLLGRHVMDPLRKIINGAPEPLYLEGAGHFVQEHGEEVAREALAWWEAHS
input PDB |
| Selected Chain(s) | A |
| Distance of aggregation | 10 Å |
| FoldX usage | Yes |
| Dynamic mode | No |
| Automated mutations | No |
| Downloads | Download all the data |
| Simulation log |
[INFO] Logger: Verbosity set to: 2 - [INFO] (00:00:00)
[WARNING] runJob: Working directory already exists (possibly overwriting previous results -ow
to prevent this behavior) (00:00:00)
[INFO] runJob: Starting aggrescan3d job on: input.pdb with A chain(s) selected (00:00:00)
[INFO] runJob: Creating pdb object from: input.pdb (00:00:00)
[INFO] FoldX: Starting FoldX energy minimalization (00:00:00)
[INFO] Analysis: Starting Aggrescan3D on folded.pdb (00:04:40)
[INFO] Main: Simulation completed successfully. (00:04:42)
|
The table below lists A3D score for protein residues. Residues with A3D score > 0.0000 are marked by yellow rows.
| residue index | residue name | chain | Aggrescan3D score | mutation |
|---|---|---|---|---|
| residue index | residue name | chain | Aggrescan3D score | |
| 1 | T | A | -0.2936 | |
| 2 | I | A | 0.2800 | |
| 3 | P | A | 0.2116 | |
| 4 | A | A | 0.1097 | |
| 5 | I | A | 0.1500 | |
| 6 | R | A | -1.1474 | |
| 7 | T | A | 0.0000 | |
| 8 | P | A | -1.6608 | |
| 9 | E | A | -2.6306 | |
| 10 | S | A | -1.9502 | |
| 11 | N | A | -1.7596 | |
| 12 | F | A | -1.5835 | |
| 13 | D | A | -2.3438 | |
| 14 | G | A | -1.1268 | |
| 15 | L | A | -0.3543 | |
| 16 | V | A | 0.2812 | |
| 17 | G | A | -0.2380 | |
| 18 | D | A | -0.8197 | |
| 19 | P | A | -0.7615 | |
| 20 | F | A | -1.3251 | |
| 21 | E | A | -2.4915 | |
| 22 | D | A | -2.0737 | |
| 23 | N | A | -0.9922 | |
| 24 | Y | A | -0.4139 | |
| 25 | I | A | 0.0000 | |
| 26 | D | A | -3.1629 | |
| 27 | D | A | -3.6649 | |
| 28 | L | A | 0.0000 | |
| 29 | P | A | -2.1742 | |
| 30 | G | A | -1.5384 | |
| 31 | F | A | 0.0000 | |
| 32 | E | A | -3.1996 | |
| 33 | G | A | -2.3069 | |
| 34 | L | A | 0.0000 | |
| 35 | R | A | 0.0000 | |
| 36 | I | A | 0.0000 | |
| 37 | H | A | 0.0000 | |
| 38 | Y | A | 0.0000 | |
| 39 | W | A | 0.0000 | |
| 40 | R | A | -1.4431 | |
| 41 | V | A | -1.2106 | |
| 42 | G | A | -1.5256 | |
| 43 | P | A | -2.1425 | |
| 44 | E | A | -3.1393 | |
| 45 | D | A | -3.5007 | |
| 46 | A | A | -2.9147 | |
| 47 | E | A | -3.2491 | |
| 48 | K | A | -2.3916 | |
| 49 | T | A | 0.0000 | |
| 50 | V | A | 0.0000 | |
| 51 | L | A | 0.0000 | |
| 52 | M | A | 0.0000 | |
| 53 | L | A | 0.0000 | |
| 54 | H | A | 0.0000 | |
| 55 | G | A | 0.0000 | |
| 56 | E | A | 0.0000 | |
| 57 | P | A | 0.0000 | |
| 58 | T | A | 0.0000 | |
| 59 | S | A | 0.0000 | |
| 60 | A | A | 0.0000 | |
| 61 | Y | A | 0.0000 | |
| 62 | S | A | 0.0000 | |
| 63 | W | A | 0.0000 | |
| 64 | R | A | 0.0000 | |
| 65 | T | A | -0.8377 | |
| 66 | M | A | 0.0000 | |
| 67 | I | A | 0.0000 | |
| 68 | P | A | -0.9974 | |
| 69 | V | A | 0.0000 | |
| 70 | F | A | 0.0000 | |
| 71 | A | A | -1.1248 | |
| 72 | D | A | -1.9256 | |
| 73 | A | A | -1.1715 | |
| 74 | G | A | -1.6225 | |
| 75 | Y | A | 0.0000 | |
| 76 | T | A | 0.0000 | |
| 77 | V | A | 0.0000 | |
| 78 | Y | A | -0.1368 | |
| 79 | A | A | 0.0000 | |
| 80 | P | A | 0.0000 | |
| 81 | D | A | 0.0000 | |
| 82 | F | A | 0.0000 | |
| 83 | L | A | 0.0000 | |
| 84 | G | A | 0.0000 | |
| 85 | F | A | 0.0000 | |
| 86 | G | A | 0.0000 | |
| 87 | R | A | -0.8162 | |
| 88 | S | A | 0.0000 | |
| 89 | D | A | 0.0000 | |
| 90 | R | A | 0.0000 | |
| 91 | P | A | 0.0000 | |
| 92 | V | A | -0.2268 | |
| 93 | R | A | -1.5648 | |
| 94 | E | A | -2.0553 | |
| 95 | E | A | -2.4656 | |
| 96 | D | A | -1.3899 | |
| 97 | Y | A | 0.0000 | |
| 98 | T | A | -0.8796 | |
| 99 | Y | A | 0.0000 | |
| 100 | T | A | -0.6635 | |
| 101 | F | A | -0.2583 | |
| 102 | H | A | 0.0000 | |
| 103 | L | A | 0.0000 | |
| 104 | N | A | -1.0241 | |
| 105 | Q | A | 0.0000 | |
| 106 | L | A | 0.0000 | |
| 107 | L | A | -0.7350 | |
| 108 | A | A | -1.4712 | |
| 109 | F | A | 0.0000 | |
| 110 | I | A | 0.0000 | |
| 111 | D | A | -3.2520 | |
| 112 | K | A | -2.8635 | |
| 113 | L | A | -1.9076 | |
| 114 | D | A | -3.0665 | |
| 115 | L | A | 0.0000 | |
| 116 | K | A | -3.2474 | |
| 117 | N | A | -2.0890 | |
| 118 | I | A | 0.0000 | |
| 119 | I | A | 0.0000 | |
| 120 | L | A | 0.0000 | |
| 121 | F | A | 0.0000 | |
| 122 | V | A | 0.0000 | |
| 123 | Q | A | 0.0000 | |
| 124 | D | A | 0.0000 | |
| 125 | W | A | 0.0000 | |
| 126 | G | A | 0.0000 | |
| 127 | G | A | 0.0000 | |
| 128 | F | A | 0.0000 | |
| 129 | I | A | 0.0000 | |
| 130 | G | A | 0.0000 | |
| 131 | L | A | 0.0000 | |
| 132 | N | A | 0.0000 | |
| 133 | L | A | 0.0000 | |
| 134 | P | A | 0.0000 | |
| 135 | M | A | -0.3954 | |
| 136 | Y | A | 0.5880 | |
| 137 | D | A | -0.5801 | |
| 138 | P | A | -1.0170 | |
| 139 | S | A | -0.8129 | |
| 140 | R | A | -1.6458 | |
| 141 | F | A | 0.0000 | |
| 142 | V | A | -0.6480 | |
| 143 | G | A | 0.0000 | |
| 144 | L | A | 0.0000 | |
| 145 | I | A | 0.0000 | |
| 146 | I | A | 0.0000 | |
| 147 | T | A | 0.0000 | |
| 148 | N | A | 0.0000 | |
| 149 | A | A | 0.0000 | |
| 150 | C | A | 0.0000 | |
| 151 | L | A | 0.0000 | |
| 152 | L | A | 0.0000 | |
| 153 | V | A | 0.0000 | |
| 154 | P | A | -1.3897 | |
| 155 | E | A | -2.6437 | |
| 156 | E | A | -2.4456 | |
| 157 | L | A | -0.7759 | |
| 158 | A | A | 0.0000 | |
| 159 | P | A | -1.4950 | |
| 160 | E | A | -1.4422 | |
| 161 | F | A | 0.0000 | |
| 162 | T | A | -1.3407 | |
| 163 | A | A | -1.2283 | |
| 164 | F | A | 0.0000 | |
| 165 | R | A | -1.2942 | |
| 166 | T | A | -1.4251 | |
| 167 | E | A | -2.5058 | |
| 168 | P | A | -2.0864 | |
| 169 | A | A | -1.6378 | |
| 170 | D | A | -2.5050 | |
| 171 | G | A | 0.0000 | |
| 172 | F | A | 0.0000 | |
| 173 | P | A | -1.4975 | |
| 174 | L | A | -1.2999 | |
| 175 | W | A | 0.0000 | |
| 176 | K | A | -1.7283 | |
| 177 | E | A | -2.1553 | |
| 178 | R | A | -1.3482 | |
| 179 | I | A | 0.0000 | |
| 180 | V | A | -1.2101 | |
| 181 | T | A | -1.3425 | |
| 182 | P | A | -1.9370 | |
| 183 | E | A | -2.7266 | |
| 184 | N | A | -2.7775 | |
| 185 | L | A | -2.0960 | |
| 186 | D | A | -2.4572 | |
| 187 | L | A | 0.0000 | |
| 188 | A | A | -1.5043 | |
| 189 | A | A | -1.6764 | |
| 190 | F | A | 0.0000 | |
| 191 | M | A | 0.0000 | |
| 192 | K | A | -2.4394 | |
| 193 | E | A | -2.5284 | |
| 194 | E | A | -1.7417 | |
| 195 | A | A | 0.0000 | |
| 196 | P | A | -1.3155 | |
| 197 | T | A | -0.9962 | |
| 198 | L | A | 0.0000 | |
| 199 | T | A | -1.1794 | |
| 200 | D | A | -2.0813 | |
| 201 | A | A | -0.8754 | |
| 202 | E | A | -0.9686 | |
| 203 | A | A | 0.0000 | |
| 204 | A | A | -0.8853 | |
| 205 | N | A | 0.0000 | |
| 206 | Y | A | 0.0000 | |
| 207 | Q | A | -0.9674 | |
| 208 | A | A | -0.9156 | |
| 209 | P | A | 0.0000 | |
| 210 | F | A | 0.0000 | |
| 211 | P | A | -0.8629 | |
| 212 | D | A | -1.8599 | |
| 213 | P | A | -1.5050 | |
| 214 | S | A | -0.5699 | |
| 215 | Y | A | -0.3191 | |
| 216 | M | A | 0.0000 | |
| 217 | A | A | 0.0000 | |
| 218 | A | A | 0.0000 | |
| 219 | V | A | 0.0000 | |
| 220 | R | A | -0.9458 | |
| 221 | K | A | -1.3716 | |
| 222 | F | A | 0.0000 | |
| 223 | P | A | 0.0000 | |
| 224 | K | A | -1.9150 | |
| 225 | M | A | 0.0000 | |
| 226 | V | A | 0.0000 | |
| 227 | E | A | -2.2620 | |
| 228 | N | A | -2.5649 | |
| 229 | P | A | -2.2079 | |
| 230 | D | A | -3.0097 | |
| 231 | K | A | -3.3906 | |
| 232 | E | A | -3.1305 | |
| 233 | T | A | 0.0000 | |
| 234 | I | A | -1.7938 | |
| 235 | E | A | -2.5144 | |
| 236 | I | A | -1.5182 | |
| 237 | S | A | 0.0000 | |
| 238 | T | A | -1.4616 | |
| 239 | K | A | -2.3536 | |
| 240 | A | A | 0.0000 | |
| 241 | I | A | 0.0000 | |
| 242 | D | A | -3.4858 | |
| 243 | F | A | 0.0000 | |
| 244 | W | A | 0.0000 | |
| 245 | K | A | -3.7475 | |
| 246 | N | A | -3.6883 | |
| 247 | D | A | -3.6568 | |
| 248 | W | A | 0.0000 | |
| 249 | K | A | -2.8341 | |
| 250 | G | A | -1.3934 | |
| 251 | K | A | -1.0893 | |
| 252 | V | A | 0.0000 | |
| 253 | F | A | 0.0000 | |
| 254 | M | A | 0.0000 | |
| 255 | A | A | 0.0000 | |
| 256 | V | A | 0.0000 | |
| 257 | G | A | 0.0000 | |
| 258 | E | A | -2.6552 | |
| 259 | Q | A | -2.6930 | |
| 260 | D | A | 0.0000 | |
| 261 | K | A | -2.8035 | |
| 262 | L | A | 0.0000 | |
| 263 | L | A | 0.0000 | |
| 264 | G | A | 0.0000 | |
| 265 | R | A | -2.2391 | |
| 266 | H | A | -2.0407 | |
| 267 | V | A | 0.0000 | |
| 268 | M | A | 0.0000 | |
| 269 | D | A | -1.9413 | |
| 270 | P | A | -1.4896 | |
| 271 | L | A | 0.0000 | |
| 272 | R | A | -2.3246 | |
| 273 | K | A | -2.4769 | |
| 274 | I | A | -1.9258 | |
| 275 | I | A | 0.0000 | |
| 276 | N | A | -2.9946 | |
| 277 | G | A | -1.9350 | |
| 278 | A | A | -1.4815 | |
| 279 | P | A | -1.4990 | |
| 280 | E | A | -1.9578 | |
| 281 | P | A | 0.0000 | |
| 282 | L | A | -0.3762 | |
| 283 | Y | A | -0.5958 | |
| 284 | L | A | -1.1945 | |
| 285 | E | A | -2.4030 | |
| 286 | G | A | -1.7648 | |
| 287 | A | A | 0.0000 | |
| 288 | G | A | -1.5864 | |
| 289 | H | A | 0.0000 | |
| 290 | F | A | 0.0000 | |
| 291 | V | A | 0.0000 | |
| 292 | Q | A | 0.0000 | |
| 293 | E | A | -0.8617 | |
| 294 | H | A | -1.2181 | |
| 295 | G | A | 0.0000 | |
| 296 | E | A | -2.7663 | |
| 297 | E | A | -3.3991 | |
| 298 | V | A | 0.0000 | |
| 299 | A | A | 0.0000 | |
| 300 | R | A | -3.3151 | |
| 301 | E | A | -2.6960 | |
| 302 | A | A | 0.0000 | |
| 303 | L | A | -1.5642 | |
| 304 | A | A | -1.4523 | |
| 305 | W | A | -1.1531 | |
| 306 | W | A | 0.0000 | |
| 307 | E | A | -2.0206 | |
| 308 | A | A | -1.2200 | |
| 309 | H | A | -1.5436 | |
| 310 | S | A | -1.2723 |
ALA alanine
ARG arginine
ASN asparagine
ASP aspartic acid
CYS cysteine
GLN glutamine
GLU glutamic acid
GLY glycine
HIS histidine
ILE isoleucine
LEU leucine
LYS lysine
MET methionine
PHE phenylalanine
PRO proline
SER serine
THR threonine
TRP tryptophan
TYR tyrosine
VAL valine