| Chain sequence(s) |
A: VSDVPRDLEVVAATPTSLLISWDAVYNVYPGTVRYYRITYGETGGNSPVQEFTVPGSKSTATISGLKPGVDYTITVYAVTGSGVKYVVYRRSPISINYRT
input PDB |
| Selected Chain(s) | A |
| Distance of aggregation | 10 Å |
| FoldX usage | Yes |
| Dynamic mode | No |
| Automated mutations | No |
| Downloads | Download all the data |
| Simulation log |
[INFO] Logger: Verbosity set to: 2 - [INFO] (00:00:00)
[WARNING] runJob: Working directory already exists (possibly overwriting previous results -ow
to prevent this behavior) (00:00:00)
[INFO] runJob: Starting aggrescan3d job on: input.pdb with A chain(s) selected (00:00:00)
[INFO] runJob: Creating pdb object from: input.pdb (00:00:00)
[INFO] FoldX: Starting FoldX energy minimalization (00:00:00)
[INFO] Analysis: Starting Aggrescan3D on folded.pdb (00:00:45)
[INFO] Main: Simulation completed successfully. (00:00:46)
|
The table below lists A3D score for protein residues. Residues with A3D score > 0.0000 are marked by yellow rows.
| residue index | residue name | chain | Aggrescan3D score | mutation |
|---|---|---|---|---|
| residue index | residue name | chain | Aggrescan3D score | |
| 1 | V | A | 1.3799 | |
| 2 | S | A | -0.1186 | |
| 3 | D | A | -0.6872 | |
| 4 | V | A | -1.0689 | |
| 5 | P | A | 0.0000 | |
| 6 | R | A | -3.5574 | |
| 7 | D | A | -3.5869 | |
| 8 | L | A | 0.0000 | |
| 9 | E | A | -2.1496 | |
| 10 | V | A | 0.0922 | |
| 11 | V | A | 1.5392 | |
| 12 | A | A | 0.8915 | |
| 13 | A | A | 0.2898 | |
| 14 | T | A | -0.5298 | |
| 15 | P | A | -1.1236 | |
| 16 | T | A | -0.9949 | |
| 17 | S | A | -0.5382 | |
| 18 | L | A | 0.0000 | |
| 19 | L | A | 0.7417 | |
| 20 | I | A | 0.0000 | |
| 21 | S | A | -1.2140 | |
| 22 | W | A | 0.0000 | |
| 23 | D | A | -3.1496 | |
| 24 | A | A | 0.0000 | |
| 25 | V | A | -0.5881 | |
| 26 | Y | A | 0.5957 | |
| 27 | N | A | -0.1456 | |
| 28 | V | A | 0.0000 | |
| 29 | Y | A | 0.8652 | |
| 30 | P | A | 0.2367 | |
| 31 | G | A | 0.0000 | |
| 32 | T | A | -0.3894 | |
| 33 | V | A | 0.0000 | |
| 34 | R | A | -2.0556 | |
| 35 | Y | A | -0.9628 | |
| 36 | Y | A | 0.0000 | |
| 37 | R | A | -0.8904 | |
| 38 | I | A | 0.0000 | |
| 39 | T | A | -0.6440 | |
| 40 | Y | A | -0.4037 | |
| 41 | G | A | 0.0000 | |
| 42 | E | A | -1.7303 | |
| 43 | T | A | -1.3780 | |
| 44 | G | A | -1.2991 | |
| 45 | G | A | -1.4628 | |
| 46 | N | A | -1.5596 | |
| 47 | S | A | -0.9299 | |
| 48 | P | A | -0.4144 | |
| 49 | V | A | 0.2757 | |
| 50 | Q | A | -1.1799 | |
| 51 | E | A | -1.8122 | |
| 52 | F | A | -0.7962 | |
| 53 | T | A | -0.4961 | |
| 54 | V | A | 0.0000 | |
| 55 | P | A | -1.1387 | |
| 56 | G | A | -1.2051 | |
| 57 | S | A | -1.2409 | |
| 58 | K | A | -2.2164 | |
| 59 | S | A | -1.3800 | |
| 60 | T | A | -0.7713 | |
| 61 | A | A | 0.0000 | |
| 62 | T | A | 0.2924 | |
| 63 | I | A | 0.0000 | |
| 64 | S | A | -0.6636 | |
| 65 | G | A | -1.0337 | |
| 66 | L | A | 0.0000 | |
| 67 | K | A | -2.4204 | |
| 68 | P | A | -1.7071 | |
| 69 | G | A | -1.5291 | |
| 70 | V | A | -1.5794 | |
| 71 | D | A | -2.4270 | |
| 72 | Y | A | 0.0000 | |
| 73 | T | A | -0.8489 | |
| 74 | I | A | 0.0000 | |
| 75 | T | A | 0.0000 | |
| 76 | V | A | 0.0000 | |
| 77 | Y | A | 0.4271 | |
| 78 | A | A | 0.1038 | |
| 79 | V | A | 0.0808 | |
| 80 | T | A | -0.1744 | |
| 81 | G | A | -0.4308 | |
| 82 | S | A | 0.2590 | |
| 83 | G | A | 0.2076 | |
| 84 | V | A | 1.4554 | |
| 85 | K | A | 0.1298 | |
| 86 | Y | A | 2.0496 | |
| 87 | V | A | 2.6444 | |
| 88 | V | A | 1.8097 | |
| 89 | Y | A | 1.4924 | |
| 90 | R | A | -0.6861 | |
| 91 | R | A | -0.6811 | |
| 92 | S | A | -0.4223 | |
| 93 | P | A | -0.2097 | |
| 94 | I | A | -0.3640 | |
| 95 | S | A | -0.5966 | |
| 96 | I | A | -0.6781 | |
| 97 | N | A | -1.7969 | |
| 98 | Y | A | -1.5851 | |
| 99 | R | A | -2.6882 | |
| 100 | T | A | -1.5947 |