| Chain sequence(s) |
A: LPAPKNLVVSRVTEDSARLSWTAPDAAFDSFAIFYHEFANPGEAIDLPVPGSERSYDLTGLKPGTEYDVRIYGVKGGTASIPLDAEFTT
input PDB |
| Selected Chain(s) | A |
| Distance of aggregation | 10 Å |
| FoldX usage | Yes |
| Dynamic mode | No |
| Automated mutations | No |
| Downloads | Download all the data |
| Simulation log |
[INFO] Logger: Verbosity set to: 2 - [INFO] (00:00:01)
[WARNING] runJob: Working directory already exists (possibly overwriting previous results -ow
to prevent this behavior) (00:00:01)
[INFO] runJob: Starting aggrescan3d job on: input.pdb with A chain(s) selected (00:00:01)
[INFO] runJob: Creating pdb object from: input.pdb (00:00:01)
[INFO] FoldX: Starting FoldX energy minimalization (00:00:01)
[INFO] Analysis: Starting Aggrescan3D on folded.pdb (00:01:56)
[INFO] Main: Simulation completed successfully. (00:01:57)
|
The table below lists A3D score for protein residues. Residues with A3D score > 0.0000 are marked by yellow rows.
| residue index | residue name | chain | Aggrescan3D score | mutation |
|---|---|---|---|---|
| residue index | residue name | chain | Aggrescan3D score | |
| 1 | L | A | 1.1330 | |
| 2 | P | A | 0.3624 | |
| 3 | A | A | 0.3607 | |
| 4 | P | A | 0.0000 | |
| 5 | K | A | -2.0136 | |
| 6 | N | A | -1.5315 | |
| 7 | L | A | -0.5335 | |
| 8 | V | A | 0.6484 | |
| 9 | V | A | 0.0890 | |
| 10 | S | A | -0.5677 | |
| 11 | R | A | -1.7876 | |
| 12 | V | A | -0.9191 | |
| 13 | T | A | -1.6985 | |
| 14 | E | A | -2.7762 | |
| 15 | D | A | -2.5416 | |
| 16 | S | A | -1.9521 | |
| 17 | A | A | 0.0000 | |
| 18 | R | A | -1.1400 | |
| 19 | L | A | 0.0000 | |
| 20 | S | A | -0.3635 | |
| 21 | W | A | 0.0000 | |
| 22 | T | A | -1.2837 | |
| 23 | A | A | -1.4333 | |
| 24 | P | A | -1.3661 | |
| 25 | D | A | -2.2817 | |
| 26 | A | A | -1.4791 | |
| 27 | A | A | -1.1209 | |
| 28 | F | A | 0.0000 | |
| 29 | D | A | -2.6025 | |
| 30 | S | A | -1.5093 | |
| 31 | F | A | 0.0000 | |
| 32 | A | A | -0.2216 | |
| 33 | I | A | 0.0000 | |
| 34 | F | A | -0.1208 | |
| 35 | Y | A | -0.5127 | |
| 36 | H | A | -1.0201 | |
| 37 | E | A | 0.0000 | |
| 38 | F | A | 0.0272 | |
| 39 | A | A | -0.4161 | |
| 40 | N | A | -1.6431 | |
| 41 | P | A | -1.1741 | |
| 42 | G | A | -1.6019 | |
| 43 | E | A | -2.3132 | |
| 44 | A | A | -1.0454 | |
| 45 | I | A | -0.3976 | |
| 46 | D | A | -1.3333 | |
| 47 | L | A | -0.2793 | |
| 48 | P | A | -0.4134 | |
| 49 | V | A | 0.0000 | |
| 50 | P | A | -1.1762 | |
| 51 | G | A | -1.8291 | |
| 52 | S | A | -1.6433 | |
| 53 | E | A | -1.5881 | |
| 54 | R | A | -1.1813 | |
| 55 | S | A | -0.6633 | |
| 56 | Y | A | -0.7343 | |
| 57 | D | A | -1.6344 | |
| 58 | L | A | 0.0000 | |
| 59 | T | A | -1.3704 | |
| 60 | G | A | -1.4388 | |
| 61 | L | A | 0.0000 | |
| 62 | K | A | -2.9154 | |
| 63 | P | A | -2.5616 | |
| 64 | G | A | -1.8406 | |
| 65 | T | A | -1.5462 | |
| 66 | E | A | -1.6400 | |
| 67 | Y | A | 0.0000 | |
| 68 | D | A | -1.4215 | |
| 69 | V | A | 0.0000 | |
| 70 | R | A | -1.3133 | |
| 71 | I | A | 0.0000 | |
| 72 | Y | A | 0.4223 | |
| 73 | G | A | 0.0000 | |
| 74 | V | A | -0.6397 | |
| 75 | K | A | -1.8848 | |
| 76 | G | A | -1.6031 | |
| 77 | G | A | -1.2654 | |
| 78 | T | A | -0.7033 | |
| 79 | A | A | 0.3765 | |
| 80 | S | A | 0.0000 | |
| 81 | I | A | 2.0335 | |
| 82 | P | A | 0.3958 | |
| 83 | L | A | -0.6386 | |
| 84 | D | A | -1.9965 | |
| 85 | A | A | -1.7234 | |
| 86 | E | A | -2.2589 | |
| 87 | F | A | 0.0000 | |
| 88 | T | A | -1.3636 | |
| 89 | T | A | -1.8598 |