| Chain sequence(s) |
A: FEFEFKFK
C: FEFEFKFK B: FEFEFKFK E: FEFEFKFK D: FEFEFKFK G: FEFEFKFK F: FEFEFKFK I: FEFEFKFK H: FEFEFKFK K: FEFEFKFK J: FEFEFKFK M: FEFEFKFK L: FEFEFKFK input PDB |
| Selected Chain(s) | A,C,B,E,D,G,F,I,H,K,J,M,L |
| Distance of aggregation | 10 Å |
| FoldX usage | Yes |
| Dynamic mode | No |
| Automated mutations | No |
| Downloads | Download all the data |
| Simulation log |
[INFO] Logger: Verbosity set to: 2 - [INFO] (00:00:00)
[WARNING] runJob: Working directory already exists (possibly overwriting previous results -ow
to prevent this behavior) (00:00:00)
[INFO] runJob: Starting aggrescan3d job on: input.pdb with all chain(s) selected (00:00:00)
[INFO] runJob: Creating pdb object from: input.pdb (00:00:00)
[INFO] FoldX: Starting FoldX energy minimalization (00:00:00)
[INFO] Analysis: Starting Aggrescan3D on folded.pdb (00:08:43)
[INFO] Main: Simulation completed successfully. (00:08:46)
|
The table below lists A3D score for protein residues. Residues with A3D score > 0.0000 are marked by yellow rows.
| residue index | residue name | chain | Aggrescan3D score | mutation |
|---|---|---|---|---|
| residue index | residue name | chain | Aggrescan3D score | |
| 1 | F | A | 0.5747 | |
| 2 | E | A | -1.9257 | |
| 3 | F | A | -1.2294 | |
| 4 | E | A | -2.7787 | |
| 5 | F | A | -0.8676 | |
| 6 | K | A | -1.6246 | |
| 7 | F | A | 0.0217 | |
| 8 | K | A | -1.2758 | |
| 1 | F | B | 0.8775 | |
| 2 | E | B | -1.2050 | |
| 3 | F | B | -0.3072 | |
| 4 | E | B | -2.0335 | |
| 5 | F | B | -0.8628 | |
| 6 | K | B | -2.4525 | |
| 7 | F | B | -1.0291 | |
| 8 | K | B | -1.6969 | |
| 1 | F | C | 1.1487 | |
| 2 | E | C | -0.9713 | |
| 3 | F | C | 0.0775 | |
| 4 | E | C | -1.6304 | |
| 5 | F | C | 0.2594 | |
| 6 | K | C | -1.2106 | |
| 7 | F | C | 0.4484 | |
| 8 | K | C | -1.3807 | |
| 1 | F | D | 1.1665 | |
| 2 | E | D | -0.9351 | |
| 3 | F | D | 0.6276 | |
| 4 | E | D | -1.1413 | |
| 5 | F | D | 1.0892 | |
| 6 | K | D | -0.9207 | |
| 7 | F | D | 0.9179 | |
| 8 | K | D | -0.9062 | |
| 1 | F | E | 1.2748 | |
| 2 | E | E | -0.8480 | |
| 3 | F | E | 0.9207 | |
| 4 | E | E | -0.8091 | |
| 5 | F | E | 0.7717 | |
| 6 | K | E | -0.8371 | |
| 7 | F | E | 0.6923 | |
| 8 | K | E | -0.9239 | |
| 1 | F | F | 0.9258 | |
| 2 | E | F | -1.6339 | |
| 3 | F | F | -1.0001 | |
| 4 | E | F | -2.0787 | |
| 5 | F | F | -1.2647 | |
| 6 | K | F | -2.4863 | |
| 7 | F | F | -0.9539 | |
| 8 | K | F | -1.6339 | |
| 1 | F | G | 1.0791 | |
| 2 | E | G | -1.2181 | |
| 3 | F | G | -0.8281 | |
| 4 | E | G | -2.2738 | |
| 5 | F | G | -0.8729 | |
| 6 | K | G | -2.1205 | |
| 7 | F | G | -0.6725 | |
| 8 | K | G | -1.7925 | |
| 1 | F | H | 1.1250 | |
| 2 | E | H | -1.6671 | |
| 3 | F | H | -0.6742 | |
| 4 | E | H | -2.2036 | |
| 5 | F | H | -0.8203 | |
| 6 | K | H | -2.2159 | |
| 7 | F | H | -0.3939 | |
| 8 | K | H | -1.2943 | |
| 1 | F | I | 0.9939 | |
| 2 | E | I | -1.5148 | |
| 3 | F | I | -1.0218 | |
| 4 | E | I | -2.3900 | |
| 5 | F | I | -1.0674 | |
| 6 | K | I | -2.0853 | |
| 7 | F | I | -0.4207 | |
| 8 | K | I | -1.4597 | |
| 1 | F | J | 1.4640 | |
| 2 | E | J | -0.9544 | |
| 3 | F | J | 0.2938 | |
| 4 | E | J | -1.2423 | |
| 5 | F | J | 0.2732 | |
| 6 | K | J | -1.6351 | |
| 7 | F | J | 0.0537 | |
| 8 | K | J | -1.1693 | |
| 1 | F | K | 1.1922 | |
| 2 | E | K | -0.8101 | |
| 3 | F | K | 1.0305 | |
| 4 | E | K | -0.5614 | |
| 5 | F | K | 1.5197 | |
| 6 | K | K | -0.3304 | |
| 7 | F | K | 0.8038 | |
| 8 | K | K | -0.8794 | |
| 1 | F | L | 1.2003 | |
| 2 | E | L | -1.1451 | |
| 3 | F | L | 0.5141 | |
| 4 | E | L | -0.8248 | |
| 5 | F | L | 1.4888 | |
| 6 | K | L | -0.3604 | |
| 7 | F | L | 1.2772 | |
| 8 | K | L | -0.6799 | |
| 1 | F | M | 1.3112 | |
| 2 | E | M | -0.4343 | |
| 3 | F | M | 0.7308 | |
| 4 | E | M | -0.7106 | |
| 5 | F | M | 0.4371 | |
| 6 | K | M | -1.6417 | |
| 7 | F | M | -0.5431 | |
| 8 | K | M | -1.5113 |