Project name: fec0cc5b913db8a

Status: done

Started: 2025-06-03 04:51:09
Settings
Chain sequence(s) H: EVQLVESGGGLVQPGGSLRLSCAASGFTFNNYAMNWVRQAPGKGLDWVSTISGSGGTTNYADSVKGRFIISRDSSKHTLYLQMNSLRAEDTAVYYCAKDSNWGNFDLWGRGTLVTVSS
L: DIVMTQSPDSLAVSLGERATINCKSSQSVLYRSNNRNFLGWYQQKPGQPPNLLIYWASTRESGVPDRFSGSGSGTDFTLTISSLQAEDVAVYYCQQYYTTPYTFGQGTKLEIK
input PDB
Selected Chain(s) H,L
Distance of aggregation 10 Å
FoldX usage Yes
Dynamic mode No
Automated mutations No
Downloads Download all the data
Simulation log
[INFO]       Logger:   Verbosity set to: 2 - [INFO]                                                (00:00:01)
[WARNING]    runJob:   Working directory already exists (possibly overwriting previous results -ow 
                       to prevent this behavior)                                                   (00:00:01)
[INFO]       runJob:   Starting aggrescan3d job on: input.pdb with all chain(s) selected           (00:00:01)
[INFO]       runJob:   Creating pdb object from: input.pdb                                         (00:00:01)
[INFO]       FoldX:    Starting FoldX energy minimalization                                        (00:00:01)
[INFO]       Analysis: Starting Aggrescan3D on folded.pdb                                          (00:01:33)
[INFO]       Main:     Simulation completed successfully.                                          (00:01:34)
Show buried residues

Minimal score value
-2.8245
Maximal score value
1.5083
Average score
-0.6622
Total score value
-152.9748

The table below lists A3D score for protein residues. Residues with A3D score > 0.0000 are marked by yellow rows.

residue index residue name chain Aggrescan3D score mutation
residue index residue name chain Aggrescan3D score
mutation
1 E H -1.5663
2 V H -0.1695
3 Q H -0.6680
4 L H 0.0000
5 V H 0.3541
6 E H 0.0000
7 S H -0.2873
8 G H -0.4191
9 G H 0.2490
11 G H 0.8486
12 L H 1.3583
13 V H -0.0536
14 Q H -1.3609
15 P H -1.6561
16 G H -1.4150
17 G H -0.9707
18 S H -1.0302
19 L H -0.6370
20 R H -1.2585
21 L H 0.0000
22 S H -0.2761
23 C H 0.0000
24 A H -0.3094
25 A H 0.0000
26 S H -0.7520
27 G H -0.6957
28 F H -0.4446
29 T H -0.7463
30 F H 0.0000
35 N H -1.6970
36 N H -1.7185
37 Y H -0.8675
38 A H -0.5715
39 M H 0.0000
40 N H 0.0000
41 W H 0.0000
42 V H 0.0000
43 R H 0.0000
44 Q H -0.6681
45 A H -1.0441
46 P H -0.8298
47 G H -1.4554
48 K H -2.3330
49 G H -1.5216
50 L H 0.0000
51 D H -1.0863
52 W H 0.0000
53 V H 0.0000
54 S H 0.0000
55 T H -0.1936
56 I H 0.0000
57 S H -0.8120
58 G H -1.1349
59 S H -0.9428
62 G H -0.7545
63 G H -0.6697
64 T H -0.5249
65 T H -0.1972
66 N H -0.6908
67 Y H -0.9466
68 A H -1.5664
69 D H -2.5679
70 S H -1.8010
71 V H 0.0000
72 K H -2.4700
74 G H -1.4337
75 R H -1.0894
76 F H 0.0000
77 I H 0.5380
78 I H 0.0000
79 S H -0.0964
80 R H -0.9983
81 D H -1.4291
82 S H -1.5574
83 S H -1.5174
84 K H -2.3354
85 H H -1.9195
86 T H -1.1205
87 L H 0.0000
88 Y H -0.1746
89 L H 0.0000
90 Q H -0.4935
91 M H 0.0000
92 N H -0.9190
93 S H -1.1790
94 L H 0.0000
95 R H -2.3071
96 A H -1.7185
97 E H -2.2543
98 D H 0.0000
99 T H -0.3596
100 A H 0.0000
101 V H 0.7088
102 Y H 0.0000
103 Y H 0.0000
104 C H 0.0000
105 A H 0.0000
106 K H 0.0000
107 D H 0.0000
108 S H -0.6374
109 N H -1.2591
110 W H -0.0523
113 G H 0.0000
114 N H 0.0000
115 F H 0.0000
116 D H -1.2001
117 L H -0.4071
118 W H 0.0000
119 G H 0.0000
120 R H -1.7726
121 G H -0.5303
122 T H 0.0000
123 L H 1.5083
124 V H 0.0000
125 T H 0.3299
126 V H 0.0000
127 S H -0.7263
128 S H -0.5019
1 D L -1.5672
2 I L 0.0000
3 V L 0.7310
4 M L 0.0000
5 T L -0.7680
6 Q L 0.0000
7 S L -1.2676
8 P L -1.2627
9 D L -2.2817
10 S L -1.4697
11 L L -0.8214
12 A L -0.5148
13 V L -1.1266
14 S L -1.2380
15 L L -0.4254
16 G L -1.1853
17 E L -2.7822
18 R L -2.8034
19 A L 0.0000
20 T L -0.6010
21 I L 0.0000
22 N L -1.3470
23 C L 0.0000
24 K L -2.0473
25 S L 0.0000
26 S L -0.9058
27 Q L -1.4899
28 S L -0.9345
29 V L 0.0000
30 L L -0.8720
31 Y L -0.8636
32 R L -2.4881
33 S L -1.9239
34 N L -2.5963
35 N L -2.8245
36 R L -2.1553
37 N L 0.0000
38 F L 0.2593
39 L L 0.0000
40 G L 0.0000
41 W L 0.0000
42 Y L 0.0000
43 Q L 0.0000
44 Q L 0.0000
45 K L -1.1762
46 P L -0.7826
47 G L -1.3549
48 Q L -1.9141
49 P L -1.4820
50 P L 0.0000
51 N L -1.5358
52 L L 0.0000
53 L L 0.0000
54 I L 0.0000
55 Y L -0.3099
56 W L 0.0000
57 A L 0.0000
65 S L -0.7304
66 T L -0.6378
67 R L -1.4998
68 E L -1.3043
69 S L -0.8069
70 G L -0.9578
71 V L -1.0749
72 P L -1.3089
74 D L -2.2439
75 R L -1.5424
76 F L 0.0000
77 S L -0.9320
78 G L 0.0000
79 S L -0.7032
80 G L -1.0812
83 S L -1.2093
84 G L -1.2184
85 T L -1.5323
86 D L -2.2333
87 F L 0.0000
88 T L -0.8859
89 L L 0.0000
90 T L -0.6777
91 I L 0.0000
92 S L -1.8735
93 S L -1.7957
94 L L 0.0000
95 Q L -0.8662
96 A L -0.7802
97 E L -1.6021
98 D L 0.0000
99 V L -0.1930
100 A L 0.0000
101 V L -0.4545
102 Y L 0.0000
103 Y L 0.0000
104 C L 0.0000
105 Q L 0.0000
106 Q L 0.0000
107 Y L 0.0000
108 Y L 0.6160
109 T L -0.0334
114 T L -0.3575
115 P L -0.8191
116 Y L 0.0000
117 T L -0.1088
118 F L 0.0000
119 G L 0.0000
120 Q L -1.4071
121 G L 0.0000
122 T L 0.0000
123 K L -1.3668
124 L L 0.0000
125 E L -1.0202
126 I L -0.7562
127 K L -1.5715
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Laboratory of Theory of Biopolymers 2018