| Chain sequence(s) |
A: KGHKGHK
C: KGHKGHK B: KGHKGHK E: KGHKGHK D: KGHKGHK G: KGHKGHK F: KGHKGHK I: KGHKGHK H: KGHKGHK K: KGHKGHK J: KGHKGHK M: KGHKGHK L: KGHKGHK O: KGHKGHK N: KGHKGHK Q: KGHKGHK P: KGHKGHK S: KGHKGHK R: KGHKGHK T: KGHKGHK input PDB |
| Selected Chain(s) | A,C,B,E,D,G,F,I,H,K,J,M,L,O,N,Q,P,S,R,T |
| Distance of aggregation | 10 Å |
| FoldX usage | Yes |
| Dynamic mode | No |
| Automated mutations | No |
| Downloads | Download all the data |
| Simulation log |
[INFO] Logger: Verbosity set to: 2 - [INFO] (00:00:01)
[WARNING] runJob: Working directory already exists (possibly overwriting previous results -ow
to prevent this behavior) (00:00:01)
[INFO] runJob: Starting aggrescan3d job on: input.pdb with all chain(s) selected (00:00:01)
[INFO] runJob: Creating pdb object from: input.pdb (00:00:01)
[INFO] FoldX: Starting FoldX energy minimalization (00:00:01)
[INFO] Analysis: Starting Aggrescan3D on folded.pdb (00:21:43)
[INFO] Main: Simulation completed successfully. (00:21:47)
|
The table below lists A3D score for protein residues. Residues with A3D score > 0.0000 are marked by yellow rows.
| residue index | residue name | chain | Aggrescan3D score | mutation |
|---|---|---|---|---|
| residue index | residue name | chain | Aggrescan3D score | |
| 1 | K | A | -3.6124 | |
| 2 | G | A | -2.3165 | |
| 3 | H | A | -2.0232 | |
| 4 | K | A | -1.9515 | |
| 5 | G | A | 0.0000 | |
| 6 | H | A | 0.0000 | |
| 7 | K | A | -3.2133 | |
| 1 | K | B | -3.6911 | |
| 2 | G | B | -2.7317 | |
| 3 | H | B | -2.4225 | |
| 4 | K | B | -2.6565 | |
| 5 | G | B | 0.0000 | |
| 6 | H | B | 0.0000 | |
| 7 | K | B | -2.8598 | |
| 1 | K | C | -3.1820 | |
| 2 | G | C | -2.6484 | |
| 3 | H | C | -2.9443 | |
| 4 | K | C | -3.4921 | |
| 5 | G | C | -2.8853 | |
| 6 | H | C | -2.9016 | |
| 7 | K | C | -3.0425 | |
| 1 | K | D | -3.1389 | |
| 2 | G | D | -2.5530 | |
| 3 | H | D | -3.0079 | |
| 4 | K | D | -3.3420 | |
| 5 | G | D | -2.7453 | |
| 6 | H | D | -2.9571 | |
| 7 | K | D | -3.2320 | |
| 1 | K | E | -3.3670 | |
| 2 | G | E | -2.6856 | |
| 3 | H | E | -2.4765 | |
| 4 | K | E | -2.7038 | |
| 5 | G | E | 0.0000 | |
| 6 | H | E | 0.0000 | |
| 7 | K | E | -3.2103 | |
| 1 | K | F | -3.3866 | |
| 2 | G | F | -2.2815 | |
| 3 | H | F | -1.8257 | |
| 4 | K | F | -1.9602 | |
| 5 | G | F | 0.0000 | |
| 6 | H | F | 0.0000 | |
| 7 | K | F | -2.9614 | |
| 1 | K | G | -3.1877 | |
| 2 | G | G | -2.2522 | |
| 3 | H | G | -1.7473 | |
| 4 | K | G | -1.8458 | |
| 5 | G | G | 0.0000 | |
| 6 | H | G | 0.0000 | |
| 7 | K | G | -3.1006 | |
| 1 | K | H | -3.1952 | |
| 2 | G | H | -2.2829 | |
| 3 | H | H | -1.7645 | |
| 4 | K | H | -1.9177 | |
| 5 | G | H | 0.0000 | |
| 6 | H | H | 0.0000 | |
| 7 | K | H | -3.0995 | |
| 1 | K | I | -3.2048 | |
| 2 | G | I | -2.3046 | |
| 3 | H | I | -1.7677 | |
| 4 | K | I | -1.8426 | |
| 5 | G | I | 0.0000 | |
| 6 | H | I | 0.0000 | |
| 7 | K | I | -3.1027 | |
| 1 | K | J | -3.2174 | |
| 2 | G | J | -2.3110 | |
| 3 | H | J | -1.7723 | |
| 4 | K | J | -1.8512 | |
| 5 | G | J | 0.0000 | |
| 6 | H | J | 0.0000 | |
| 7 | K | J | -3.1307 | |
| 1 | K | K | -3.4242 | |
| 2 | G | K | -2.4243 | |
| 3 | H | K | -1.9071 | |
| 4 | K | K | -2.0757 | |
| 5 | G | K | 0.0000 | |
| 6 | H | K | 0.0000 | |
| 7 | K | K | -3.3043 | |
| 1 | K | L | -3.4658 | |
| 2 | G | L | -2.6442 | |
| 3 | H | L | -2.1911 | |
| 4 | K | L | -2.6135 | |
| 5 | G | L | 0.0000 | |
| 6 | H | L | 0.0000 | |
| 7 | K | L | -3.1219 | |
| 1 | K | M | -3.0660 | |
| 2 | G | M | -2.2991 | |
| 3 | H | M | -2.1297 | |
| 4 | K | M | -2.6055 | |
| 5 | G | M | -2.4898 | |
| 6 | H | M | -2.4085 | |
| 7 | K | M | -2.9289 | |
| 1 | K | N | -3.2158 | |
| 2 | G | N | -2.5192 | |
| 3 | H | N | -2.7030 | |
| 4 | K | N | -3.2890 | |
| 5 | G | N | -2.6201 | |
| 6 | H | N | -2.5745 | |
| 7 | K | N | -3.0806 | |
| 1 | K | O | -3.8017 | |
| 2 | G | O | -2.7840 | |
| 3 | H | O | -2.4600 | |
| 4 | K | O | -2.9241 | |
| 5 | G | O | 0.0000 | |
| 6 | H | O | 0.0000 | |
| 7 | K | O | -3.4469 | |
| 1 | K | P | -3.6755 | |
| 2 | G | P | -2.4379 | |
| 3 | H | P | -1.8800 | |
| 4 | K | P | -2.3086 | |
| 5 | G | P | 0.0000 | |
| 6 | H | P | 0.0000 | |
| 7 | K | P | -3.2746 | |
| 1 | K | Q | -3.6266 | |
| 2 | G | Q | -2.3233 | |
| 3 | H | Q | -1.8006 | |
| 4 | K | Q | -2.0928 | |
| 5 | G | Q | 0.0000 | |
| 6 | H | Q | 0.0000 | |
| 7 | K | Q | -3.2155 | |
| 1 | K | R | -3.6326 | |
| 2 | G | R | -2.2692 | |
| 3 | H | R | -1.6854 | |
| 4 | K | R | -1.8096 | |
| 5 | G | R | 0.0000 | |
| 6 | H | R | 0.0000 | |
| 7 | K | R | -2.8493 | |
| 1 | K | S | -3.6582 | |
| 2 | G | S | -2.2819 | |
| 3 | H | S | -1.7421 | |
| 4 | K | S | -1.8859 | |
| 5 | G | S | 0.0000 | |
| 6 | H | S | 0.0000 | |
| 7 | K | S | -3.1474 | |
| 1 | K | T | -3.6592 | |
| 2 | G | T | -2.3172 | |
| 3 | H | T | -1.7884 | |
| 4 | K | T | -2.0036 | |
| 5 | G | T | 0.0000 | |
| 6 | H | T | 0.0000 | |
| 7 | K | T | -3.1820 |