| Chain sequence(s) |
A: KRFKKFFKKVKKSVKKRLKKIFKKPMVIGVTIPF
input PDB |
| Selected Chain(s) | A |
| Distance of aggregation | 10 Å |
| FoldX usage | Yes |
| Dynamic mode | No |
| Automated mutations | No |
| Downloads | Download all the data |
| Simulation log |
[INFO] Logger: Verbosity set to: 2 - [INFO] (00:00:00)
[WARNING] runJob: Working directory already exists (possibly overwriting previous results -ow
to prevent this behavior) (00:00:00)
[INFO] runJob: Starting aggrescan3d job on: input.pdb with A chain(s) selected (00:00:00)
[INFO] runJob: Creating pdb object from: input.pdb (00:00:00)
[INFO] FoldX: Starting FoldX energy minimalization (00:00:00)
[INFO] Analysis: Starting Aggrescan3D on folded.pdb (00:01:28)
[INFO] Main: Simulation completed successfully. (00:01:28)
|
The table below lists A3D score for protein residues. Residues with A3D score > 0.0000 are marked by yellow rows.
| residue index | residue name | chain | Aggrescan3D score | mutation |
|---|---|---|---|---|
| residue index | residue name | chain | Aggrescan3D score | |
| 1 | K | A | -2.8291 | |
| 2 | R | A | -2.5396 | |
| 3 | F | A | -0.8322 | |
| 4 | K | A | -2.3665 | |
| 5 | K | A | -2.2051 | |
| 6 | F | A | 0.1589 | |
| 7 | F | A | 0.0215 | |
| 8 | K | A | -2.4477 | |
| 9 | K | A | -2.6148 | |
| 10 | V | A | -1.4437 | |
| 11 | K | A | -3.4715 | |
| 12 | K | A | -4.0941 | |
| 13 | S | A | -3.0801 | |
| 14 | V | A | -2.9195 | |
| 15 | K | A | -4.5344 | |
| 16 | K | A | -4.5367 | |
| 17 | R | A | -3.9849 | |
| 18 | L | A | -2.4930 | |
| 19 | K | A | -3.5068 | |
| 20 | K | A | -3.2801 | |
| 21 | I | A | -1.0313 | |
| 22 | F | A | -0.0995 | |
| 23 | K | A | -1.3181 | |
| 24 | K | A | -0.8868 | |
| 25 | P | A | 0.2547 | |
| 26 | M | A | 1.2752 | |
| 27 | V | A | 1.8006 | |
| 28 | I | A | 2.3948 | |
| 29 | G | A | 1.0707 | |
| 30 | V | A | 1.3104 | |
| 31 | T | A | 1.5377 | |
| 32 | I | A | 2.3750 | |
| 33 | P | A | 1.7758 | |
| 34 | F | A | 2.3600 |