| Chain sequence(s) |
A: VSSVPTKLEVVAATPTSLLVSWDAPAVTVVFYDITYGETGGNSPVQEFTVSGSKSTATISGLKPGVDYTITVYAKYLWYSGYSSPISINYRT
input PDB |
| Selected Chain(s) | A |
| Distance of aggregation | 10 Å |
| FoldX usage | Yes |
| Dynamic mode | No |
| Automated mutations | No |
| Downloads | Download all the data |
| Simulation log |
[INFO] Logger: Verbosity set to: 2 - [INFO] (00:00:01)
[WARNING] runJob: Working directory already exists (possibly overwriting previous results -ow
to prevent this behavior) (00:00:01)
[INFO] runJob: Starting aggrescan3d job on: input.pdb with A chain(s) selected (00:00:01)
[INFO] runJob: Creating pdb object from: input.pdb (00:00:01)
[INFO] FoldX: Starting FoldX energy minimalization (00:00:01)
[INFO] Analysis: Starting Aggrescan3D on folded.pdb (00:01:16)
[INFO] Main: Simulation completed successfully. (00:01:17)
|
The table below lists A3D score for protein residues. Residues with A3D score > 0.0000 are marked by yellow rows.
| residue index | residue name | chain | Aggrescan3D score | mutation |
|---|---|---|---|---|
| residue index | residue name | chain | Aggrescan3D score | |
| 1 | V | A | 1.8025 | |
| 2 | S | A | 0.7806 | |
| 3 | S | A | 0.6136 | |
| 4 | V | A | 0.3948 | |
| 5 | P | A | 0.0000 | |
| 6 | T | A | -1.6418 | |
| 7 | K | A | -2.6137 | |
| 8 | L | A | -1.6642 | |
| 9 | E | A | -1.8484 | |
| 10 | V | A | 0.1322 | |
| 11 | V | A | 1.5578 | |
| 12 | A | A | 0.9034 | |
| 13 | A | A | 0.3074 | |
| 14 | T | A | -0.3401 | |
| 15 | P | A | -1.1105 | |
| 16 | T | A | -0.9940 | |
| 17 | S | A | -0.5242 | |
| 18 | L | A | 0.0000 | |
| 19 | L | A | 0.7596 | |
| 20 | V | A | 0.0000 | |
| 21 | S | A | -0.9123 | |
| 22 | W | A | 0.0000 | |
| 23 | D | A | -2.6115 | |
| 24 | A | A | -1.2301 | |
| 25 | P | A | 0.0230 | |
| 26 | A | A | 0.5042 | |
| 27 | V | A | 1.0544 | |
| 28 | T | A | 0.7969 | |
| 29 | V | A | 0.0000 | |
| 30 | V | A | 1.4132 | |
| 31 | F | A | 1.2658 | |
| 32 | Y | A | 0.0000 | |
| 33 | D | A | -0.0308 | |
| 34 | I | A | 0.0000 | |
| 35 | T | A | -0.4736 | |
| 36 | Y | A | -0.2938 | |
| 37 | G | A | 0.0000 | |
| 38 | E | A | -1.6172 | |
| 39 | T | A | -1.2867 | |
| 40 | G | A | -1.2565 | |
| 41 | G | A | -1.4291 | |
| 42 | N | A | -1.5599 | |
| 43 | S | A | -0.8923 | |
| 44 | P | A | -0.3408 | |
| 45 | V | A | 0.4151 | |
| 46 | Q | A | -0.8501 | |
| 47 | E | A | -1.5893 | |
| 48 | F | A | -0.5598 | |
| 49 | T | A | 0.0983 | |
| 50 | V | A | 0.1879 | |
| 51 | S | A | -0.0492 | |
| 52 | G | A | -0.0055 | |
| 53 | S | A | -0.6991 | |
| 54 | K | A | -1.6365 | |
| 55 | S | A | -1.1811 | |
| 56 | T | A | -0.6738 | |
| 57 | A | A | 0.0000 | |
| 58 | T | A | 0.2690 | |
| 59 | I | A | 0.0000 | |
| 60 | S | A | -0.6536 | |
| 61 | G | A | -1.0257 | |
| 62 | L | A | 0.0000 | |
| 63 | K | A | -2.3700 | |
| 64 | P | A | -1.6453 | |
| 65 | G | A | -1.4425 | |
| 66 | V | A | -1.4212 | |
| 67 | D | A | -2.1349 | |
| 68 | Y | A | 0.0000 | |
| 69 | T | A | -0.7965 | |
| 70 | I | A | 0.0000 | |
| 71 | T | A | -0.1308 | |
| 72 | V | A | 0.0000 | |
| 73 | Y | A | 0.5784 | |
| 74 | A | A | 0.0000 | |
| 75 | K | A | 1.2630 | |
| 76 | Y | A | 0.0000 | |
| 77 | L | A | 2.7177 | |
| 78 | W | A | 2.5053 | |
| 79 | Y | A | 2.3439 | |
| 80 | S | A | 1.0897 | |
| 81 | G | A | 1.0457 | |
| 82 | Y | A | 1.1289 | |
| 83 | S | A | 0.0000 | |
| 84 | S | A | 0.0863 | |
| 85 | P | A | 0.1241 | |
| 86 | I | A | -0.0050 | |
| 87 | S | A | -0.5587 | |
| 88 | I | A | -0.7173 | |
| 89 | N | A | -1.7464 | |
| 90 | Y | A | -1.4766 | |
| 91 | R | A | -2.5322 | |
| 92 | T | A | -1.6295 |