| Chain sequence(s) |
A: VSSVPTKLEVVAATPTSLLISWDAPAVTVDHYVITYGETGGNSPVQEFEVPGSKSTATISGLSPGVDYTITVYAGHFWYGYQYWSPISINYRT
input PDB |
| Selected Chain(s) | A |
| Distance of aggregation | 10 Å |
| FoldX usage | Yes |
| Dynamic mode | No |
| Automated mutations | No |
| Downloads | Download all the data |
| Simulation log |
[INFO] Logger: Verbosity set to: 2 - [INFO] (00:00:00)
[WARNING] runJob: Working directory already exists (possibly overwriting previous results -ow
to prevent this behavior) (00:00:00)
[INFO] runJob: Starting aggrescan3d job on: input.pdb with A chain(s) selected (00:00:00)
[INFO] runJob: Creating pdb object from: input.pdb (00:00:00)
[INFO] FoldX: Starting FoldX energy minimalization (00:00:00)
[INFO] Analysis: Starting Aggrescan3D on folded.pdb (00:00:30)
[INFO] Main: Simulation completed successfully. (00:00:30)
|
The table below lists A3D score for protein residues. Residues with A3D score > 0.0000 are marked by yellow rows.
| residue index | residue name | chain | Aggrescan3D score | mutation |
|---|---|---|---|---|
| residue index | residue name | chain | Aggrescan3D score | |
| 1 | V | A | 1.8000 | |
| 2 | S | A | 0.8811 | |
| 3 | S | A | 0.9195 | |
| 4 | V | A | 0.8189 | |
| 5 | P | A | 0.0000 | |
| 6 | T | A | -1.5698 | |
| 7 | K | A | -2.6978 | |
| 8 | L | A | 0.0000 | |
| 9 | E | A | -1.9177 | |
| 10 | V | A | 0.1116 | |
| 11 | V | A | 1.5515 | |
| 12 | A | A | 0.9111 | |
| 13 | A | A | 0.3343 | |
| 14 | T | A | -0.1957 | |
| 15 | P | A | -0.8065 | |
| 16 | T | A | -0.5354 | |
| 17 | S | A | -0.3097 | |
| 18 | L | A | 0.0000 | |
| 19 | L | A | 0.7895 | |
| 20 | I | A | 0.0000 | |
| 21 | S | A | -0.9560 | |
| 22 | W | A | 0.0000 | |
| 23 | D | A | -2.6093 | |
| 24 | A | A | -1.2045 | |
| 25 | P | A | 0.0802 | |
| 26 | A | A | 0.4462 | |
| 27 | V | A | 0.7923 | |
| 28 | T | A | 0.0930 | |
| 29 | V | A | -0.3028 | |
| 30 | D | A | -1.3695 | |
| 31 | H | A | -1.3937 | |
| 32 | Y | A | 0.0000 | |
| 33 | V | A | -0.6820 | |
| 34 | I | A | 0.0000 | |
| 35 | T | A | -0.5789 | |
| 36 | Y | A | -0.2745 | |
| 37 | G | A | 0.0000 | |
| 38 | E | A | -1.3485 | |
| 39 | T | A | -1.2471 | |
| 40 | G | A | -1.2445 | |
| 41 | G | A | -1.4274 | |
| 42 | N | A | -1.5488 | |
| 43 | S | A | -0.8616 | |
| 44 | P | A | -0.3072 | |
| 45 | V | A | 0.4725 | |
| 46 | Q | A | -0.7803 | |
| 47 | E | A | -1.8297 | |
| 48 | F | A | -1.2950 | |
| 49 | E | A | -1.9060 | |
| 50 | V | A | 0.0000 | |
| 51 | P | A | -1.6355 | |
| 52 | G | A | -1.6866 | |
| 53 | S | A | -1.4432 | |
| 54 | K | A | -2.1336 | |
| 55 | S | A | -1.4740 | |
| 56 | T | A | -0.7688 | |
| 57 | A | A | 0.0000 | |
| 58 | T | A | 0.2554 | |
| 59 | I | A | 0.0000 | |
| 60 | S | A | -0.4736 | |
| 61 | G | A | -0.6876 | |
| 62 | L | A | 0.0000 | |
| 63 | S | A | -0.8462 | |
| 64 | P | A | -0.9930 | |
| 65 | G | A | -1.0815 | |
| 66 | V | A | -0.9139 | |
| 67 | D | A | -1.8593 | |
| 68 | Y | A | 0.0000 | |
| 69 | T | A | -0.7873 | |
| 70 | I | A | 0.0000 | |
| 71 | T | A | -0.0575 | |
| 72 | V | A | 0.0000 | |
| 73 | Y | A | 0.5082 | |
| 74 | A | A | 0.0000 | |
| 75 | G | A | 0.0000 | |
| 76 | H | A | 0.0000 | |
| 77 | F | A | 2.9562 | |
| 78 | W | A | 3.1592 | |
| 79 | Y | A | 2.5621 | |
| 80 | G | A | 1.6975 | |
| 81 | Y | A | 2.5943 | |
| 82 | Q | A | 1.7646 | |
| 83 | Y | A | 2.0728 | |
| 84 | W | A | 1.3682 | |
| 85 | S | A | 0.0000 | |
| 86 | P | A | 0.3295 | |
| 87 | I | A | 0.1947 | |
| 88 | S | A | -0.3410 | |
| 89 | I | A | -0.5465 | |
| 90 | N | A | -1.7316 | |
| 91 | Y | A | -1.4640 | |
| 92 | R | A | -2.3392 | |
| 93 | T | A | -1.1898 |