Chain sequence(s) |
A: GIPFFPSSLKRLLIIVVVIELVVKVIVGALLMGL
input PDB |
Selected Chain(s) | A |
Distance of aggregation | 10 Å |
FoldX usage | Yes |
Dynamic mode | No |
Automated mutations | No |
Downloads | Download all the data |
Simulation log |
[INFO] Logger: Verbosity set to: 2 - [INFO] (00:00:00) [WARNING] runJob: Working directory already exists (possibly overwriting previous results -ow to prevent this behavior) (00:00:00) [INFO] runJob: Starting aggrescan3d job on: input.pdb with A chain(s) selected (00:00:00) [INFO] runJob: Creating pdb object from: input.pdb (00:00:00) [INFO] FoldX: Starting FoldX energy minimalization (00:00:00) [INFO] Analysis: Starting Aggrescan3D on folded.pdb (00:00:32) [INFO] Main: Simulation completed successfully. (00:00:33) |
The table below lists A3D score for protein residues. Residues with A3D score > 0.0000 are marked by yellow rows.
residue index | residue name | chain | Aggrescan3D score | mutation |
---|---|---|---|---|
residue index | residue name | chain | Aggrescan3D score | |
1 | G | A | 0.7475 | |
2 | I | A | 2.2910 | |
3 | P | A | 1.6902 | |
4 | F | A | 2.4260 | |
5 | F | A | 1.2997 | |
6 | P | A | 0.0663 | |
7 | S | A | -0.5155 | |
8 | S | A | -0.6108 | |
9 | L | A | 0.6479 | |
10 | K | A | -0.2262 | |
11 | R | A | -0.2444 | |
12 | L | A | 2.2921 | |
13 | L | A | 3.1846 | |
14 | I | A | 4.1548 | |
15 | I | A | 4.8331 | |
16 | V | A | 4.4284 | |
17 | V | A | 4.9418 | |
18 | V | A | 5.0272 | |
19 | I | A | 4.5074 | |
20 | E | A | 2.2636 | |
21 | L | A | 3.5018 | |
22 | V | A | 3.9145 | |
23 | V | A | 3.0727 | |
24 | K | A | 1.5660 | |
25 | V | A | 3.4752 | |
26 | I | A | 3.8319 | |
27 | V | A | 3.4161 | |
28 | G | A | 2.7931 | |
29 | A | A | 3.1381 | |
30 | L | A | 3.6749 | |
31 | L | A | 3.5634 | |
32 | M | A | 2.8508 | |
33 | G | A | 1.7822 | |
34 | L | A | 2.3106 |