Project name: query_structure

Status: done

Started: 2026-03-16 22:55:37
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Chain sequence(s) A: ATCYCRTGRCATRESLSGVCEISGRLYRLCCR
C: ATCYCRTGRCATRESLSGVCEISGRLYRLCCR
B: ATCYCRTGRCATRESLSGVCEISGRLYRLCCR
D: ATCCYYCCRRTTGRLSGVCEISGRLYRLCCCC
input PDB
Selected Chain(s) A,C,B,D
Distance of aggregation 10 Å
FoldX usage Yes
Dynamic mode No
Automated mutations No
Downloads Download all the data
Simulation log
[INFO]       Logger:   Verbosity set to: 2 - [INFO]                                                (00:00:00)
[WARNING]    runJob:   Working directory already exists (possibly overwriting previous results -ow 
                       to prevent this behavior)                                                   (00:00:00)
[INFO]       runJob:   Starting aggrescan3d job on: input.pdb with all chain(s) selected           (00:00:00)
[INFO]       runJob:   Creating pdb object from: input.pdb                                         (00:00:00)
[INFO]       FoldX:    Starting FoldX energy minimalization                                        (00:00:00)
[INFO]       Analysis: Starting Aggrescan3D on folded.pdb                                          (00:01:08)
[INFO]       Main:     Simulation completed successfully.                                          (00:01:09)
Show buried residues

Minimal score value
-2.6119
Maximal score value
1.5051
Average score
-0.6431
Total score value
-77.8101

The table below lists A3D score for protein residues. Residues with A3D score > 0.0000 are marked by yellow rows.

residue index residue name chain Aggrescan3D score mutation
residue index residue name chain Aggrescan3D score
mutation
1 A A -0.4328
2 T A -0.4445
3 C A -0.1933
4 Y A -0.1802
5 C A -0.2554
6 R A -0.9570
7 T A -1.0955
8 G A -1.7548
9 R A -2.2258
10 C A -1.4871
11 A A -1.2675
12 T A -1.3323
13 R A -2.4286
14 E A -1.7205
15 S A -0.7810
16 L A 0.5687
17 S A 0.2278
18 G A 0.1183
19 V A 0.3319
20 C A 0.0000
21 E A -1.0352
22 I A -0.3753
23 S A -0.8041
24 G A -1.2920
25 R A -1.5780
26 L A 0.0895
27 Y A -0.7334
28 R A -1.1370
29 L A 0.0000
30 C A 0.0000
31 C A -0.8931
32 R A -2.1451
1 A C -0.3875
2 T C -0.4219
3 C C 0.0000
4 Y C 0.0079
5 C C 0.0215
6 R C -0.9747
7 T C -1.1491
8 G C -1.5844
9 R C -2.2011
10 C C 0.0000
11 A C -1.3120
12 T C -1.4781
13 R C -2.5035
14 E C -1.9091
15 S C -1.0624
16 L C 0.1648
17 S C -0.0725
18 G C -0.2105
19 V C 0.3504
20 C C 0.0000
21 E C -0.5872
22 I C 0.0582
23 S C -0.7318
24 G C -1.4081
25 R C -1.9082
26 L C -0.6835
27 Y C -0.4461
28 R C -0.9496
29 L C 0.0000
30 C C 0.0000
31 C C 0.0000
32 R C -2.2860
1 A B -0.1464
2 T B -0.0609
3 C B 0.2997
4 Y B 0.4379
5 C B 0.0200
6 R B -0.7336
7 T B -0.9814
8 G B -1.6673
9 R B -2.1961
10 C B -1.5259
11 A B 0.0000
12 T B -1.6320
13 R B -2.6119
14 E B -1.6538
15 S B -0.6633
16 L B 0.5281
17 S B 0.1002
18 G B -0.2046
19 V B 0.0767
20 C B 0.0000
21 E B -1.4611
22 I B -0.4508
23 S B -0.8748
24 G B -1.3691
25 R B -1.6768
26 L B -0.0794
27 Y B 0.0000
28 R B -1.2742
29 L B 0.0000
30 C B 0.0000
31 C B -0.5639
32 R B -1.5221
1 A D 0.2543
2 T D 0.6172
3 C D 0.0000
4 Y D 1.2290
5 C D -0.2317
6 R D -1.7782
7 T D -1.5818
8 G D -1.9660
9 R D -2.3034
16 L D 1.5051
17 S D 0.6931
18 G D 0.0929
19 V D 0.3057
20 C D 0.0000
21 E D -1.1793
22 I D -0.3506
23 S D -0.7938
24 G D -1.2603
25 R D -1.5784
26 L D -0.0222
27 Y D 0.0000
28 R D -0.8694
29 L D 0.0000
30 C D 0.7109
31 C D 1.4614
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Laboratory of Theory of Biopolymers 2018