| Chain sequence(s) |
A: AALAAYRTALAATRAAADAFMAAVRADLGDSPEVRELEALRARLRATTDELLAALDAKEWDRALALAREVRALVKELVAKVRSIIGTLSAEAQALAAALLAATAATLAALDALEAAIAAL
input PDB |
| Selected Chain(s) | A |
| Distance of aggregation | 10 Å |
| FoldX usage | Yes |
| Dynamic mode | No |
| Automated mutations | No |
| Downloads | Download all the data |
| Simulation log |
[INFO] Logger: Verbosity set to: 2 - [INFO] (00:00:00)
[WARNING] runJob: Working directory already exists (possibly overwriting previous results -ow
to prevent this behavior) (00:00:00)
[INFO] runJob: Starting aggrescan3d job on: input.pdb with A chain(s) selected (00:00:00)
[INFO] runJob: Creating pdb object from: input.pdb (00:00:00)
[INFO] FoldX: Starting FoldX energy minimalization (00:00:00)
[INFO] Analysis: Starting Aggrescan3D on folded.pdb (00:01:28)
[INFO] Main: Simulation completed successfully. (00:01:29)
|
The table below lists A3D score for protein residues. Residues with A3D score > 0.0000 are marked by yellow rows.
| residue index | residue name | chain | Aggrescan3D score | mutation |
|---|---|---|---|---|
| residue index | residue name | chain | Aggrescan3D score | |
| 1 | A | A | 0.1263 | |
| 2 | A | A | -0.0165 | |
| 3 | L | A | -0.0102 | |
| 4 | A | A | -0.0395 | |
| 5 | A | A | -0.0627 | |
| 6 | Y | A | 0.0000 | |
| 7 | R | A | -0.6806 | |
| 8 | T | A | -0.3568 | |
| 9 | A | A | -0.1705 | |
| 10 | L | A | 0.0000 | |
| 11 | A | A | -0.2496 | |
| 12 | A | A | -0.3058 | |
| 13 | T | A | -0.3632 | |
| 14 | R | A | -1.1100 | |
| 15 | A | A | -0.6669 | |
| 16 | A | A | -0.4591 | |
| 17 | A | A | -0.9905 | |
| 18 | D | A | -1.8751 | |
| 19 | A | A | -0.7473 | |
| 20 | F | A | 0.0000 | |
| 21 | M | A | -0.8597 | |
| 22 | A | A | -0.6769 | |
| 23 | A | A | -0.9324 | |
| 24 | V | A | 0.0000 | |
| 25 | R | A | -1.5359 | |
| 26 | A | A | -0.8513 | |
| 27 | D | A | -1.3861 | |
| 28 | L | A | -0.9891 | |
| 29 | G | A | -1.6846 | |
| 30 | D | A | -2.6263 | |
| 31 | S | A | -2.2197 | |
| 32 | P | A | -2.2749 | |
| 33 | E | A | -2.7646 | |
| 34 | V | A | 0.0000 | |
| 35 | R | A | -3.7059 | |
| 36 | E | A | -3.3266 | |
| 37 | L | A | 0.0000 | |
| 38 | E | A | -2.2736 | |
| 39 | A | A | -2.2814 | |
| 40 | L | A | 0.0000 | |
| 41 | R | A | -2.8456 | |
| 42 | A | A | -2.2134 | |
| 43 | R | A | -2.7937 | |
| 44 | L | A | -2.6380 | |
| 45 | R | A | -3.2567 | |
| 46 | A | A | -2.4823 | |
| 47 | T | A | -2.4477 | |
| 48 | T | A | 0.0000 | |
| 49 | D | A | -2.7532 | |
| 50 | E | A | -2.9175 | |
| 51 | L | A | 0.0000 | |
| 52 | L | A | -1.4972 | |
| 53 | A | A | -1.8204 | |
| 54 | A | A | 0.0000 | |
| 55 | L | A | 0.0000 | |
| 56 | D | A | -2.3783 | |
| 57 | A | A | -1.8534 | |
| 58 | K | A | -3.0223 | |
| 59 | E | A | -3.0531 | |
| 60 | W | A | -1.9314 | |
| 61 | D | A | -2.6915 | |
| 62 | R | A | -2.9268 | |
| 63 | A | A | 0.0000 | |
| 64 | L | A | -1.5007 | |
| 65 | A | A | -1.7307 | |
| 66 | L | A | 0.0000 | |
| 67 | A | A | 0.0000 | |
| 68 | R | A | -2.8567 | |
| 69 | E | A | -2.8155 | |
| 70 | V | A | 0.0000 | |
| 71 | R | A | -2.1760 | |
| 72 | A | A | -2.1685 | |
| 73 | L | A | -2.1457 | |
| 74 | V | A | 0.0000 | |
| 75 | K | A | -2.5388 | |
| 76 | E | A | -2.3828 | |
| 77 | L | A | -1.6115 | |
| 78 | V | A | -0.8770 | |
| 79 | A | A | -1.3682 | |
| 80 | K | A | -1.6586 | |
| 81 | V | A | 0.0000 | |
| 82 | R | A | -1.8313 | |
| 83 | S | A | -1.1911 | |
| 84 | I | A | 0.0000 | |
| 85 | I | A | -0.8403 | |
| 86 | G | A | -0.8444 | |
| 87 | T | A | -0.5886 | |
| 88 | L | A | 0.0000 | |
| 89 | S | A | -0.9697 | |
| 90 | A | A | -1.0243 | |
| 91 | E | A | -1.9765 | |
| 92 | A | A | 0.0000 | |
| 93 | Q | A | -1.1286 | |
| 94 | A | A | -0.5896 | |
| 95 | L | A | -0.3591 | |
| 96 | A | A | 0.0000 | |
| 97 | A | A | 0.0408 | |
| 98 | A | A | 0.2578 | |
| 99 | L | A | 0.0000 | |
| 100 | L | A | 0.5820 | |
| 101 | A | A | 0.3030 | |
| 102 | A | A | 0.2143 | |
| 103 | T | A | 0.0000 | |
| 104 | A | A | 0.2925 | |
| 105 | A | A | 0.1144 | |
| 106 | T | A | 0.0000 | |
| 107 | L | A | -0.0915 | |
| 108 | A | A | -0.2468 | |
| 109 | A | A | -0.3406 | |
| 110 | L | A | 0.0000 | |
| 111 | D | A | -1.1992 | |
| 112 | A | A | -0.4777 | |
| 113 | L | A | 0.0000 | |
| 114 | E | A | -0.3847 | |
| 115 | A | A | -0.0577 | |
| 116 | A | A | 0.3605 | |
| 117 | I | A | 0.3081 | |
| 118 | A | A | 0.7261 | |
| 119 | A | A | 0.9018 | |
| 120 | L | A | 1.7226 |