| Chain sequence(s) |
A: NFTLPPNFGKRPTDLELSVKLVEMLEAIMYATGCTLEESKIKEVLEKPKIIDLALEAQFTLMPKTALELAKVFRLKNIEALAILVCGCSPPGNLSNLFSLKVKGDLNASLVMTTCSTICARERMPELLEKYSRGIYDGDLKDKVPYKGIDISLKLVLKPCTEGIKLKSKRPQLLRKELKELEEKIKKLTEEVTKLSKENVGKSIMFAMTPKILKTSSLMPKRGYKLGLELSEKACLNGRCRRTVSLETGCRNVQLCSTILNVAFPPEVIGPLFFFPLLYMEQQLKEGEEIVKKIKEEEKKKE
input PDB |
| Selected Chain(s) | A |
| Distance of aggregation | 10 Å |
| FoldX usage | Yes |
| Dynamic mode | No |
| Automated mutations | No |
| Downloads | Download all the data |
| Simulation log |
[INFO] Logger: Verbosity set to: 2 - [INFO] (00:00:00)
[WARNING] runJob: Working directory already exists (possibly overwriting previous results -ow
to prevent this behavior) (00:00:00)
[INFO] runJob: Starting aggrescan3d job on: input.pdb with A chain(s) selected (00:00:00)
[INFO] runJob: Creating pdb object from: input.pdb (00:00:00)
[INFO] FoldX: Starting FoldX energy minimalization (00:00:00)
[INFO] Analysis: Starting Aggrescan3D on folded.pdb (00:06:54)
[INFO] Main: Simulation completed successfully. (00:06:56)
|
The table below lists A3D score for protein residues. Residues with A3D score > 0.0000 are marked by yellow rows.
| residue index | residue name | chain | Aggrescan3D score | mutation |
|---|---|---|---|---|
| residue index | residue name | chain | Aggrescan3D score | |
| 1 | N | A | -0.8884 | |
| 2 | F | A | -0.0905 | |
| 3 | T | A | -0.2691 | |
| 4 | L | A | -0.3643 | |
| 5 | P | A | -0.3610 | |
| 6 | P | A | -1.0877 | |
| 7 | N | A | -2.0837 | |
| 8 | F | A | -1.1405 | |
| 9 | G | A | -1.3785 | |
| 10 | K | A | -2.3303 | |
| 11 | R | A | -1.5838 | |
| 12 | P | A | -0.9195 | |
| 13 | T | A | -0.6875 | |
| 14 | D | A | -0.6840 | |
| 15 | L | A | 0.5815 | |
| 16 | E | A | -0.3021 | |
| 17 | L | A | -0.2120 | |
| 18 | S | A | 0.9158 | |
| 19 | V | A | 1.5861 | |
| 20 | K | A | 0.1085 | |
| 21 | L | A | 0.6736 | |
| 22 | V | A | 0.6784 | |
| 23 | E | A | -0.9661 | |
| 24 | M | A | -0.5772 | |
| 25 | L | A | 0.0060 | |
| 26 | E | A | -1.1753 | |
| 27 | A | A | 0.0000 | |
| 28 | I | A | -0.3125 | |
| 29 | M | A | 0.0000 | |
| 30 | Y | A | -0.5009 | |
| 31 | A | A | -0.4866 | |
| 32 | T | A | 0.0000 | |
| 33 | G | A | 0.0000 | |
| 34 | C | A | 0.0000 | |
| 35 | T | A | -0.1963 | |
| 36 | L | A | 0.0000 | |
| 37 | E | A | -2.3249 | |
| 38 | E | A | -3.4539 | |
| 39 | S | A | -2.8993 | |
| 40 | K | A | -3.4849 | |
| 41 | I | A | -2.7038 | |
| 42 | K | A | -3.8212 | |
| 43 | E | A | -4.0451 | |
| 44 | V | A | 0.0000 | |
| 45 | L | A | -1.8441 | |
| 46 | E | A | -3.3468 | |
| 47 | K | A | -3.1233 | |
| 48 | P | A | -2.3750 | |
| 49 | K | A | -2.5388 | |
| 50 | I | A | -1.5640 | |
| 51 | I | A | -1.4668 | |
| 52 | D | A | -2.5867 | |
| 53 | L | A | -1.4507 | |
| 54 | A | A | 0.0000 | |
| 55 | L | A | -1.2296 | |
| 56 | E | A | -1.6671 | |
| 57 | A | A | 0.0000 | |
| 58 | Q | A | 0.0000 | |
| 59 | F | A | 0.0000 | |
| 60 | T | A | -0.7640 | |
| 61 | L | A | -0.4783 | |
| 62 | M | A | 0.0000 | |
| 63 | P | A | 0.0000 | |
| 64 | K | A | -1.4675 | |
| 65 | T | A | 0.0000 | |
| 66 | A | A | 0.0000 | |
| 67 | L | A | -1.1000 | |
| 68 | E | A | -2.0005 | |
| 69 | L | A | 0.0000 | |
| 70 | A | A | 0.0000 | |
| 71 | K | A | -2.0535 | |
| 72 | V | A | 0.1029 | |
| 73 | F | A | -1.0225 | |
| 74 | R | A | -2.5752 | |
| 75 | L | A | -2.0285 | |
| 76 | K | A | -2.7104 | |
| 77 | N | A | -2.0118 | |
| 78 | I | A | -0.4290 | |
| 79 | E | A | 0.0000 | |
| 80 | A | A | 0.0000 | |
| 81 | L | A | 0.0000 | |
| 82 | A | A | 0.0000 | |
| 83 | I | A | 0.0000 | |
| 84 | L | A | 0.0000 | |
| 85 | V | A | 0.0000 | |
| 86 | C | A | 0.0000 | |
| 87 | G | A | 0.0000 | |
| 88 | C | A | 0.0000 | |
| 89 | S | A | 0.0000 | |
| 90 | P | A | 0.0000 | |
| 91 | P | A | 0.0000 | |
| 92 | G | A | 0.0000 | |
| 93 | N | A | -0.1665 | |
| 94 | L | A | 0.3256 | |
| 95 | S | A | 0.0000 | |
| 96 | N | A | 0.0000 | |
| 97 | L | A | 0.2764 | |
| 98 | F | A | 0.0000 | |
| 99 | S | A | 0.0000 | |
| 100 | L | A | -0.4965 | |
| 101 | K | A | -1.9257 | |
| 102 | V | A | 0.0000 | |
| 103 | K | A | -2.5557 | |
| 104 | G | A | 0.0000 | |
| 105 | D | A | -1.5838 | |
| 106 | L | A | -0.6688 | |
| 107 | N | A | 0.0000 | |
| 108 | A | A | 0.0000 | |
| 109 | S | A | 0.0000 | |
| 110 | L | A | 0.0000 | |
| 111 | V | A | 0.0000 | |
| 112 | M | A | 0.0000 | |
| 113 | T | A | 0.0000 | |
| 114 | T | A | 0.4018 | |
| 115 | C | A | 0.3915 | |
| 116 | S | A | 0.0000 | |
| 117 | T | A | 0.0000 | |
| 118 | I | A | -0.0696 | |
| 119 | C | A | -0.6631 | |
| 120 | A | A | 0.0000 | |
| 121 | R | A | -2.3455 | |
| 122 | E | A | -3.1158 | |
| 123 | R | A | -2.8324 | |
| 124 | M | A | 0.0000 | |
| 125 | P | A | 0.0000 | |
| 126 | E | A | -3.6077 | |
| 127 | L | A | 0.0000 | |
| 128 | L | A | 0.0000 | |
| 129 | E | A | -3.8240 | |
| 130 | K | A | -2.7040 | |
| 131 | Y | A | -1.6042 | |
| 132 | S | A | 0.0000 | |
| 133 | R | A | -3.0082 | |
| 134 | G | A | -1.6720 | |
| 135 | I | A | -1.1990 | |
| 136 | Y | A | -1.6338 | |
| 137 | D | A | -2.4642 | |
| 138 | G | A | -2.5222 | |
| 139 | D | A | -3.6689 | |
| 140 | L | A | 0.0000 | |
| 141 | K | A | -3.8745 | |
| 142 | D | A | -3.1208 | |
| 143 | K | A | -1.9678 | |
| 144 | V | A | 0.0000 | |
| 145 | P | A | -0.8072 | |
| 146 | Y | A | -0.9008 | |
| 147 | K | A | -1.6155 | |
| 148 | G | A | -1.0388 | |
| 149 | I | A | 0.0000 | |
| 150 | D | A | -1.4789 | |
| 151 | I | A | -0.3639 | |
| 152 | S | A | -0.3899 | |
| 153 | L | A | -0.6051 | |
| 154 | K | A | -1.2834 | |
| 155 | L | A | -0.7378 | |
| 156 | V | A | -0.4909 | |
| 157 | L | A | -0.8550 | |
| 158 | K | A | -2.2697 | |
| 159 | P | A | 0.0000 | |
| 160 | C | A | 0.0000 | |
| 161 | T | A | -1.8579 | |
| 162 | E | A | -2.7013 | |
| 163 | G | A | 0.0000 | |
| 164 | I | A | -2.1711 | |
| 165 | K | A | -3.3892 | |
| 166 | L | A | -2.4834 | |
| 167 | K | A | -2.6786 | |
| 168 | S | A | -2.8549 | |
| 169 | K | A | -3.2093 | |
| 170 | R | A | -3.0709 | |
| 171 | P | A | -2.5070 | |
| 172 | Q | A | -2.3708 | |
| 173 | L | A | -1.6065 | |
| 174 | L | A | -2.4479 | |
| 175 | R | A | -3.4105 | |
| 176 | K | A | -3.8474 | |
| 177 | E | A | -3.1680 | |
| 178 | L | A | -3.0984 | |
| 179 | K | A | -4.6816 | |
| 180 | E | A | -4.7820 | |
| 181 | L | A | -3.7463 | |
| 182 | E | A | -4.6218 | |
| 183 | E | A | -4.6786 | |
| 184 | K | A | -3.9096 | |
| 185 | I | A | -3.5359 | |
| 186 | K | A | -4.3921 | |
| 187 | K | A | -4.2094 | |
| 188 | L | A | -3.1665 | |
| 189 | T | A | -2.7433 | |
| 190 | E | A | -3.8352 | |
| 191 | E | A | -3.5673 | |
| 192 | V | A | -2.1387 | |
| 193 | T | A | -2.4992 | |
| 194 | K | A | -3.5485 | |
| 195 | L | A | -2.7027 | |
| 196 | S | A | -2.2492 | |
| 197 | K | A | -3.5062 | |
| 198 | E | A | -3.2676 | |
| 199 | N | A | 0.0000 | |
| 200 | V | A | -1.2030 | |
| 201 | G | A | -1.9760 | |
| 202 | K | A | -1.6246 | |
| 203 | S | A | 0.1565 | |
| 204 | I | A | 0.0000 | |
| 205 | M | A | 1.4622 | |
| 206 | F | A | 2.0457 | |
| 207 | A | A | 0.0000 | |
| 208 | M | A | 1.0237 | |
| 209 | T | A | 0.2101 | |
| 210 | P | A | -0.7786 | |
| 211 | K | A | -1.2486 | |
| 212 | I | A | 0.0000 | |
| 213 | L | A | -0.4340 | |
| 214 | K | A | -1.3278 | |
| 215 | T | A | 0.0000 | |
| 216 | S | A | 0.0000 | |
| 217 | S | A | -1.1253 | |
| 218 | L | A | -0.6116 | |
| 219 | M | A | 0.0000 | |
| 220 | P | A | 0.0000 | |
| 221 | K | A | -1.6293 | |
| 222 | R | A | -1.5090 | |
| 223 | G | A | 0.0000 | |
| 224 | Y | A | 0.0000 | |
| 225 | K | A | -1.8528 | |
| 226 | L | A | -1.1545 | |
| 227 | G | A | 0.0000 | |
| 228 | L | A | -1.6106 | |
| 229 | E | A | -2.4821 | |
| 230 | L | A | -1.7114 | |
| 231 | S | A | 0.0000 | |
| 232 | E | A | -3.0674 | |
| 233 | K | A | -2.6507 | |
| 234 | A | A | -1.5508 | |
| 235 | C | A | -0.9354 | |
| 236 | L | A | -1.4982 | |
| 237 | N | A | -2.1548 | |
| 238 | G | A | -2.2271 | |
| 239 | R | A | -2.9609 | |
| 240 | C | A | 0.0000 | |
| 241 | R | A | -2.2326 | |
| 242 | R | A | -1.8843 | |
| 243 | T | A | 0.0000 | |
| 244 | V | A | 0.0000 | |
| 245 | S | A | 0.0000 | |
| 246 | L | A | 0.0000 | |
| 247 | E | A | 0.0000 | |
| 248 | T | A | 0.0000 | |
| 249 | G | A | 0.0000 | |
| 250 | C | A | 0.0000 | |
| 251 | R | A | 0.0000 | |
| 252 | N | A | -0.5321 | |
| 253 | V | A | 0.0000 | |
| 254 | Q | A | -1.2382 | |
| 255 | L | A | 0.0000 | |
| 256 | C | A | 0.0000 | |
| 257 | S | A | -0.4262 | |
| 258 | T | A | -0.4344 | |
| 259 | I | A | 0.0000 | |
| 260 | L | A | 0.0000 | |
| 261 | N | A | -0.4215 | |
| 262 | V | A | 0.2171 | |
| 263 | A | A | 0.0000 | |
| 264 | F | A | 0.0000 | |
| 265 | P | A | -0.2505 | |
| 266 | P | A | -0.5326 | |
| 267 | E | A | -1.0224 | |
| 268 | V | A | 0.8188 | |
| 269 | I | A | 0.0000 | |
| 270 | G | A | 0.1640 | |
| 271 | P | A | 0.8673 | |
| 272 | L | A | 0.0000 | |
| 273 | F | A | 0.2229 | |
| 274 | F | A | 0.0000 | |
| 275 | F | A | 0.0000 | |
| 276 | P | A | 0.0000 | |
| 277 | L | A | 0.0693 | |
| 278 | L | A | 0.0000 | |
| 279 | Y | A | 0.0000 | |
| 280 | M | A | -0.6660 | |
| 281 | E | A | -1.5905 | |
| 282 | Q | A | -1.6149 | |
| 283 | Q | A | 0.0000 | |
| 284 | L | A | -1.5213 | |
| 285 | K | A | -2.9005 | |
| 286 | E | A | -2.6605 | |
| 287 | G | A | 0.0000 | |
| 288 | E | A | -3.3304 | |
| 289 | E | A | -3.6766 | |
| 290 | I | A | -2.8539 | |
| 291 | V | A | 0.0000 | |
| 292 | K | A | -4.5640 | |
| 293 | K | A | -4.6177 | |
| 294 | I | A | -4.0721 | |
| 295 | K | A | -5.1934 | |
| 296 | E | A | -5.8038 | |
| 297 | E | A | -6.0121 | |
| 298 | E | A | -5.7810 | |
| 299 | K | A | -5.9233 | |
| 300 | K | A | -5.5724 | |
| 301 | K | A | -5.0234 | |
| 302 | E | A | -4.2502 |
ALA alanine
ARG arginine
ASN asparagine
ASP aspartic acid
CYS cysteine
GLN glutamine
GLU glutamic acid
GLY glycine
HIS histidine
ILE isoleucine
LEU leucine
LYS lysine
MET methionine
PHE phenylalanine
PRO proline
SER serine
THR threonine
TRP tryptophan
TYR tyrosine
VAL valine