| Chain sequence(s) |
A: EVQLVESGGGLVQPGGSLRLSCAASGSFNAMGWLRQAPGKEREFVAAISSSGNTYYADSVKGRFTISRDNSKNTLYLQMNSLRPEDTAVYYCATGGAGLTYPSGFSYWGQGTLVTVSS
input PDB |
| Selected Chain(s) | A |
| Distance of aggregation | 10 Å |
| FoldX usage | Yes |
| Dynamic mode | No |
| Automated mutations | No |
| Downloads | Download all the data |
| Simulation log |
[INFO] Logger: Verbosity set to: 2 - [INFO] (00:00:00)
[WARNING] runJob: Working directory already exists (possibly overwriting previous results -ow
to prevent this behavior) (00:00:00)
[INFO] runJob: Starting aggrescan3d job on: input.pdb with A chain(s) selected (00:00:00)
[INFO] runJob: Creating pdb object from: input.pdb (00:00:00)
[INFO] FoldX: Starting FoldX energy minimalization (00:00:00)
[INFO] Analysis: Starting Aggrescan3D on folded.pdb (00:01:15)
[INFO] Main: Simulation completed successfully. (00:01:16)
|
The table below lists A3D score for protein residues. Residues with A3D score > 0.0000 are marked by yellow rows.
| residue index | residue name | chain | Aggrescan3D score | mutation |
|---|---|---|---|---|
| residue index | residue name | chain | Aggrescan3D score | |
| 1 | E | A | -2.1039 | |
| 2 | V | A | -1.0477 | |
| 3 | Q | A | -1.2375 | |
| 4 | L | A | 0.0000 | |
| 5 | V | A | 0.5079 | |
| 6 | E | A | 0.0000 | |
| 7 | S | A | -0.2284 | |
| 8 | G | A | -0.6154 | |
| 9 | G | A | 0.1552 | |
| 10 | G | A | 0.6935 | |
| 11 | L | A | 1.4038 | |
| 12 | V | A | -0.0104 | |
| 13 | Q | A | -1.3005 | |
| 14 | P | A | -1.4756 | |
| 15 | G | A | -1.3371 | |
| 16 | G | A | -0.8759 | |
| 17 | S | A | -1.0100 | |
| 18 | L | A | -0.8446 | |
| 19 | R | A | -2.0400 | |
| 20 | L | A | 0.0000 | |
| 21 | S | A | -0.4308 | |
| 22 | C | A | 0.0000 | |
| 23 | A | A | -0.3598 | |
| 24 | A | A | 0.0000 | |
| 25 | S | A | -1.1835 | |
| 26 | G | A | -1.2541 | |
| 27 | S | A | -0.7636 | |
| 28 | F | A | -0.3563 | |
| 29 | N | A | -0.4525 | |
| 30 | A | A | 0.0000 | |
| 31 | M | A | 0.0000 | |
| 32 | G | A | 0.0000 | |
| 33 | W | A | 0.0000 | |
| 34 | L | A | -0.2825 | |
| 35 | R | A | 0.0000 | |
| 36 | Q | A | -1.8239 | |
| 37 | A | A | -1.6504 | |
| 38 | P | A | -1.3888 | |
| 39 | G | A | -1.9583 | |
| 40 | K | A | -3.4020 | |
| 41 | E | A | -3.6755 | |
| 42 | R | A | -2.9179 | |
| 43 | E | A | -2.4472 | |
| 44 | F | A | -0.6798 | |
| 45 | V | A | 0.0000 | |
| 46 | A | A | 0.0000 | |
| 47 | A | A | 0.0000 | |
| 48 | I | A | 0.0000 | |
| 49 | S | A | -0.7494 | |
| 50 | S | A | -0.8842 | |
| 51 | S | A | -0.8964 | |
| 52 | G | A | -1.1558 | |
| 53 | N | A | -1.4389 | |
| 54 | T | A | -0.4151 | |
| 55 | Y | A | 0.0887 | |
| 56 | Y | A | -0.4943 | |
| 57 | A | A | -1.2185 | |
| 58 | D | A | -2.3225 | |
| 59 | S | A | -1.7431 | |
| 60 | V | A | 0.0000 | |
| 61 | K | A | -2.5079 | |
| 62 | G | A | -1.7722 | |
| 63 | R | A | -1.3553 | |
| 64 | F | A | 0.0000 | |
| 65 | T | A | -0.7343 | |
| 66 | I | A | 0.0000 | |
| 67 | S | A | -0.6447 | |
| 68 | R | A | -1.3369 | |
| 69 | D | A | -2.0296 | |
| 70 | N | A | -2.5898 | |
| 71 | S | A | -2.0938 | |
| 72 | K | A | -2.8253 | |
| 73 | N | A | -2.4264 | |
| 74 | T | A | -1.4015 | |
| 75 | L | A | 0.0000 | |
| 76 | Y | A | -0.4439 | |
| 77 | L | A | 0.0000 | |
| 78 | Q | A | -1.0959 | |
| 79 | M | A | 0.0000 | |
| 80 | N | A | -1.3832 | |
| 81 | S | A | -1.1720 | |
| 82 | L | A | 0.0000 | |
| 83 | R | A | -2.0621 | |
| 84 | P | A | -1.8133 | |
| 85 | E | A | -2.2500 | |
| 86 | D | A | 0.0000 | |
| 87 | T | A | -0.3717 | |
| 88 | A | A | 0.0000 | |
| 89 | V | A | 0.7380 | |
| 90 | Y | A | 0.0000 | |
| 91 | Y | A | 0.3348 | |
| 92 | C | A | 0.0000 | |
| 93 | A | A | 0.0000 | |
| 94 | T | A | 0.0000 | |
| 95 | G | A | 0.0000 | |
| 96 | G | A | -0.5400 | |
| 97 | A | A | -0.4648 | |
| 98 | G | A | -0.5637 | |
| 99 | L | A | -0.3523 | |
| 100 | T | A | -0.1043 | |
| 101 | Y | A | 0.4121 | |
| 102 | P | A | 0.0789 | |
| 103 | S | A | -0.3561 | |
| 104 | G | A | -0.4189 | |
| 105 | F | A | 0.2147 | |
| 106 | S | A | 0.4108 | |
| 107 | Y | A | 1.1721 | |
| 108 | W | A | 1.0024 | |
| 109 | G | A | 0.0822 | |
| 110 | Q | A | -0.7333 | |
| 111 | G | A | 0.1329 | |
| 112 | T | A | 0.5652 | |
| 113 | L | A | 1.6441 | |
| 114 | V | A | 0.0000 | |
| 115 | T | A | 0.3974 | |
| 116 | V | A | 0.0000 | |
| 117 | S | A | -0.7760 | |
| 118 | S | A | -0.6783 |