Project name: ffcef1ee670488

Status: done

Started: 2026-02-23 14:12:55
Settings
Chain sequence(s) A: FEFEFEGKGH
C: FEFEFEGKGH
B: FEFEFEGKGH
E: FEFEFEGKGH
D: FEFEFEGKGH
G: FEFEFEGKGH
F: FEFEFEGKGH
I: FEFEFEGKGH
H: FEFEFEGKGH
K: FEFEFEGKGH
J: FEFEFEGKGH
L: FEFEFEGKGH
input PDB
Selected Chain(s) A,C,B,E,D,G,F,I,H,K,J,L
Distance of aggregation 10 Å
FoldX usage Yes
Dynamic mode No
Automated mutations No
Downloads Download all the data
Simulation log
[INFO]       Logger:   Verbosity set to: 2 - [INFO]                                                (00:00:01)
[WARNING]    runJob:   Working directory already exists (possibly overwriting previous results -ow 
                       to prevent this behavior)                                                   (00:00:01)
[INFO]       runJob:   Starting aggrescan3d job on: input.pdb with all chain(s) selected           (00:00:01)
[INFO]       runJob:   Creating pdb object from: input.pdb                                         (00:00:01)
[INFO]       FoldX:    Starting FoldX energy minimalization                                        (00:00:01)
[INFO]       Analysis: Starting Aggrescan3D on folded.pdb                                          (00:06:54)
[INFO]       Main:     Simulation completed successfully.                                          (00:06:57)
Show buried residues

Minimal score value
-3.5128
Maximal score value
0.9595
Average score
-1.3307
Total score value
-159.681

The table below lists A3D score for protein residues. Residues with A3D score > 0.0000 are marked by yellow rows.

residue index residue name chain Aggrescan3D score mutation
residue index residue name chain Aggrescan3D score
mutation
1 F A 0.4354
2 E A -1.6150
3 F A 0.0000
4 E A -2.3455
5 F A 0.0000
6 E A -2.0768
7 G A 0.0000
8 K A -2.4034
9 G A 0.0000
10 H A -1.4788
1 F B 0.2775
2 E B -1.7065
3 F B 0.0000
4 E B -2.5123
5 F B 0.0000
6 E B -2.2168
7 G B 0.0000
8 K B -2.2594
9 G B 0.0000
10 H B -1.4478
1 F C 0.3513
2 E C -1.6465
3 F C 0.0000
4 E C -3.0374
5 F C 0.0000
6 E C -3.1376
7 G C 0.0000
8 K C -2.9632
9 G C 0.0000
10 H C -1.6650
1 F D 0.9388
2 E D -1.7903
3 F D 0.0000
4 E D -3.1365
5 F D 0.0000
6 E D -3.4259
7 G D -2.8821
8 K D -3.4255
9 G D -2.0828
10 H D -1.6264
1 F E 0.3225
2 E E -1.7413
3 F E -1.3146
4 E E -2.2770
5 F E -1.5943
6 E E -2.9540
7 G E -3.0483
8 K E -3.4184
9 G E -2.5265
10 H E -1.6124
1 F F 0.4632
2 E F -1.4608
3 F F 0.0000
4 E F -2.2126
5 F F 0.0000
6 E F -2.2824
7 G F 0.0000
8 K F -2.4601
9 G F 0.0000
10 H F -1.2561
1 F G 0.6509
2 E G -1.3896
3 F G 0.0000
4 E G -2.9942
5 F G 0.0000
6 E G -2.7452
7 G G 0.0000
8 K G -2.2367
9 G G 0.0000
10 H G -1.5313
1 F H 0.5384
2 E H -1.3224
3 F H 0.0000
4 E H -2.2656
5 F H 0.0000
6 E H -2.3578
7 G H 0.0000
8 K H -2.6411
9 G H 0.0000
10 H H -1.4768
1 F I 0.4021
2 E I -1.8002
3 F I 0.0000
4 E I -3.1446
5 F I 0.0000
6 E I -3.0809
7 G I 0.0000
8 K I -2.5162
9 G I 0.0000
10 H I -1.4643
1 F J 0.5352
2 E J -1.6933
3 F J -1.7222
4 E J -2.4267
5 F J -1.8778
6 E J -3.1152
7 G J -3.0807
8 K J -3.5128
9 G J -2.6316
10 H J -1.7243
1 F K 0.9595
2 E K -1.7075
3 F K 0.0000
4 E K -3.0502
5 F K 0.0000
6 E K -3.3582
7 G K -2.8123
8 K K -3.2882
9 G K -2.0864
10 H K -1.7424
1 F L 0.0996
2 E L -1.6500
3 F L 0.0000
4 E L -2.7682
5 F L 0.0000
6 E L -2.9481
7 G L 0.0000
8 K L -2.8645
9 G L 0.0000
10 H L -1.5876
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Laboratory of Theory of Biopolymers 2018