Project name: ffcef445cd1d08a

Status: done

Started: 2025-08-10 18:51:45
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Chain sequence(s) A: WNPPTFSPALLVVTEGDNATFTCSFSNTSESFVLNWYRMSPSNQTDKLAAFPEDRSQPGQDCRFRVTQLPNGRDFHMSVVRARRNDSGTYLCGAISLAPKAQIKESLRAELRV
H: QVQLVQSGAEVKKPGASVKVSCKASGYTFTSYWINWVRQAPGQGLEWMGNIYPGSSLTNYNEKFKNRVTMTRDTSTSTVYMELSSLRSEDTAVYYCARLSTGTFAYWGQGTLVTV
L: DIVMTQSPDSLAVSLGERATINCKSSQSLWDSGNQKNFLTWYQQKPGQPPKLLIYWTSYRESGVPDRFSGSGSGTDFTLTISSLQAEDVAVYYCQNDYFYPHTFGGGTKVEIK
input PDB
Selected Chain(s) A,H,L
Distance of aggregation 10 Å
FoldX usage Yes
Dynamic mode No
Automated mutations No
Downloads Download all the data
Simulation log
[INFO]       Logger:   Verbosity set to: 2 - [INFO]                                                (00:00:00)
[WARNING]    runJob:   Working directory already exists (possibly overwriting previous results -ow 
                       to prevent this behavior)                                                   (00:00:00)
[INFO]       runJob:   Starting aggrescan3d job on: input.pdb with all chain(s) selected           (00:00:00)
[INFO]       runJob:   Creating pdb object from: input.pdb                                         (00:00:00)
[INFO]       FoldX:    Starting FoldX energy minimalization                                        (00:00:00)
[INFO]       Analysis: Starting Aggrescan3D on folded.pdb                                          (00:03:31)
[INFO]       Main:     Simulation completed successfully.                                          (00:03:34)
Show buried residues

Minimal score value
-4.0626
Maximal score value
1.7706
Average score
-0.6622
Total score value
-225.8102

The table below lists A3D score for protein residues. Residues with A3D score > 0.0000 are marked by yellow rows.

residue index residue name chain Aggrescan3D score mutation
residue index residue name chain Aggrescan3D score
mutation
1 W A -0.5279
2 N A -1.3872
3 P A -0.6563
4 P A 0.0000
5 T A -0.1477
6 F A 0.0000
7 S A -0.1474
8 P A 0.0833
9 A A 0.3310
10 L A 0.8091
11 L A 1.0111
12 V A 1.7706
13 V A 0.3023
14 T A -1.6334
15 E A -3.6056
16 G A -3.0443
17 D A -2.7296
18 N A -2.4434
19 A A 0.0000
20 T A -0.6261
21 F A 0.0000
22 T A -0.3651
23 C A 0.0000
24 S A -0.8807
25 F A 0.0000
26 S A -1.5875
27 N A -1.9355
28 T A -1.2181
29 S A -1.4670
30 E A -2.0566
31 S A -0.8816
32 F A -0.3356
33 V A 0.0000
34 L A 0.0000
35 N A 0.0000
36 W A 0.0000
37 Y A 0.0000
38 R A -0.6321
39 M A -0.5019
40 S A -0.8337
41 P A -1.0057
42 S A -1.1700
43 N A -1.4412
44 Q A 0.0000
45 T A 0.0000
46 D A -0.7740
47 K A 0.0000
48 L A 0.0000
49 A A 0.0000
50 A A -0.7442
51 F A -0.8316
52 P A -1.1276
53 E A -2.4873
54 D A -2.1488
55 R A -1.8563
56 S A -1.5617
57 Q A -1.0187
58 P A -0.8643
59 G A -1.0348
60 Q A -1.2330
61 D A -0.9662
62 C A -0.3381
63 R A -0.8490
64 F A 0.0000
65 R A -1.4115
66 V A 0.0000
67 T A -1.0626
68 Q A -1.3960
69 L A -1.1180
70 P A -1.3119
71 N A -2.1762
72 G A -2.4721
73 R A -2.6866
74 D A -1.6353
75 F A 0.0000
76 H A -0.8456
77 M A 0.0000
78 S A -1.0766
79 V A 0.0000
80 V A -1.5931
81 R A -3.2996
82 A A 0.0000
83 R A -4.0626
84 R A -3.7123
85 N A -2.7637
86 D A 0.0000
87 S A -1.4458
88 G A -0.9625
89 T A -0.7260
90 Y A 0.0000
91 L A 0.0000
92 C A 0.0000
93 G A 0.0000
94 A A 0.0000
95 I A 0.0000
96 S A -0.1958
97 L A 0.3637
98 A A -0.1574
99 P A -0.7605
100 K A -1.5372
101 A A -1.0253
102 Q A -0.9930
103 I A 0.0000
104 K A -0.9651
105 E A -0.4401
106 S A 0.0000
107 L A 0.7994
108 R A -0.7765
109 A A 0.0000
110 E A -0.5687
111 L A 0.0000
112 R A -0.9707
113 V A -1.3989
114 Q H -1.9008
115 V H 0.0000
116 Q H -1.7502
117 L H 0.0000
118 V H -0.4216
119 Q H 0.0000
120 S H -0.6384
121 G H -0.5483
122 A H 0.1406
123 E H 0.0311
124 V H 1.0151
125 K H -1.0118
126 K H -2.1312
127 P H -2.1914
128 G H -1.5553
129 A H -1.2232
130 S H -1.4458
131 V H 0.0000
132 K H -2.1026
133 V H 0.0000
134 S H -0.6966
135 C H 0.0000
136 K H -1.3009
137 A H -0.8577
138 S H -1.0771
139 G H -1.2285
140 Y H -0.6692
141 T H -0.1103
142 F H 0.0000
143 T H -0.1782
144 S H 0.1916
145 Y H 0.4165
146 W H 0.5573
147 I H 0.0000
148 N H -0.2313
149 W H 0.0000
150 V H 0.0000
151 R H 0.0000
152 Q H -0.4239
153 A H 0.0000
154 P H -0.9508
155 G H -1.2874
156 Q H -1.7086
157 G H -1.1525
158 L H 0.0000
159 E H -0.5906
160 W H 0.0000
161 M H 0.0000
162 G H 0.0000
163 N H -0.2118
164 I H 0.0000
165 Y H 0.5523
166 P H 0.0000
167 G H -0.0386
168 S H 0.1410
169 S H 0.3662
170 L H 1.2166
171 T H 0.1656
172 N H -1.1422
173 Y H -1.5957
174 N H 0.0000
175 E H -3.0333
176 K H -2.8691
177 F H 0.0000
178 K H -2.7076
179 N H -2.4381
180 R H -1.6999
181 V H 0.0000
182 T H -1.0650
183 M H 0.0000
184 T H -0.2714
185 R H -0.9115
186 D H -1.1354
187 T H -0.7944
188 S H -0.5424
189 T H -0.6904
190 S H -0.8552
191 T H -0.8580
192 V H 0.0000
193 Y H -0.6695
194 M H 0.0000
195 E H -1.6201
196 L H 0.0000
197 S H -1.2757
198 S H -1.1934
199 L H 0.0000
200 R H -2.7123
201 S H -1.7386
202 E H -1.3799
203 D H 0.0000
204 T H -0.4389
205 A H 0.0000
206 V H 0.3207
207 Y H 0.0000
208 Y H 0.0000
209 C H 0.0000
210 A H 0.0000
211 R H 0.0000
212 L H 0.0000
213 S H -0.2038
214 T H -0.2573
215 G H 0.0000
216 T H 0.0796
217 F H 0.0113
218 A H 0.0000
219 Y H 0.0000
220 W H -0.3883
221 G H 0.0000
222 Q H -1.2492
223 G H -0.4224
224 T H 0.0000
225 L H 0.7354
226 V H 0.0000
227 T H 0.1502
228 V H -0.7518
229 D L -1.5022
230 I L 0.0079
231 V L 0.5357
232 M L 0.0000
233 T L -0.6286
234 Q L -1.2841
235 S L -1.3919
236 P L -1.5433
237 D L -2.4993
238 S L -1.9494
239 L L -1.2938
240 A L -1.0804
241 V L 0.0000
242 S L -1.2357
243 L L -0.5287
244 G L -1.6332
245 E L -2.3942
246 R L -2.4981
247 A L 0.0000
248 T L -0.8309
249 I L 0.0000
250 N L -1.7070
251 C L 0.0000
252 K L -2.1647
253 S L 0.0000
254 S L -0.9820
255 Q L -1.5496
256 S L -0.9374
257 L L 0.0000
258 W L -0.2014
259 D L -0.5707
260 S L -0.8793
261 G L -1.2060
262 N L 0.0000
263 Q L -1.4929
264 K L -0.8440
265 N L -0.4316
266 F L 0.0000
267 L L 0.0000
268 T L 0.0000
269 W L 0.0000
270 Y L 0.0000
271 Q L 0.0000
272 Q L -1.0464
273 K L -1.7947
274 P L -0.9915
275 G L -1.1273
276 Q L -1.4982
277 P L -1.1446
278 P L 0.0000
279 K L -0.8987
280 L L 0.0000
281 L L 0.0000
282 I L 0.0000
283 Y L 0.0000
284 W L 0.0000
285 T L 0.0000
286 S L -0.3838
287 Y L -0.0783
288 R L 0.0000
289 E L 0.0000
290 S L 0.0000
291 G L -1.0179
292 V L -0.6614
293 P L -1.1181
294 D L -2.0789
295 R L -1.5781
296 F L 0.0000
297 S L -0.7300
298 G L -0.4008
299 S L -0.8400
300 G L -1.1198
301 S L -0.8624
302 G L -0.9003
303 T L -1.4837
304 D L -2.2433
305 F L 0.0000
306 T L -0.9633
307 L L 0.0000
308 T L 0.0000
309 I L 0.0000
310 S L -1.7873
311 S L -1.6860
312 L L 0.0000
313 Q L -1.6453
314 A L -0.9579
315 E L -2.1389
316 D L 0.0000
317 V L -0.6551
318 A L 0.0000
319 V L -0.9501
320 Y L 0.0000
321 Y L 0.0000
322 C L 0.0000
323 Q L 0.0000
324 N L 0.0000
325 D L -0.0276
326 Y L 0.7256
327 F L 1.3136
328 Y L 0.4728
329 P L 0.0000
330 H L 0.4700
331 T L 0.0000
332 F L 0.0000
333 G L 0.0000
334 G L -1.3520
335 G L 0.0000
336 T L 0.0000
337 K L -2.3227
338 V L 0.0000
339 E L -1.8803
340 I L -0.4991
341 K L -1.5838
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Laboratory of Theory of Biopolymers 2018