Chain sequence(s) |
A: WNPPTFSPALLVVTEGDNATFTCSFSNTSESFVLNWYRMSPSNQTDKLAAFPEDRSQPGQDCRFRVTQLPNGRDFHMSVVRARRNDSGTYLCGAISLAPKAQIKESLRAELRV
H: QVQLVQSGAEVKKPGASVKVSCKASGYTFTSYWINWVRQAPGQGLEWMGNIYPGSSLTNYNEKFKNRVTMTRDTSTSTVYMELSSLRSEDTAVYYCARLSTGTFAYWGQGTLVTV L: DIVMTQSPDSLAVSLGERATINCKSSQSLWDSGNQKNFLTWYQQKPGQPPKLLIYWTSYRESGVPDRFSGSGSGTDFTLTISSLQAEDVAVYYCQNDYFYPHTFGGGTKVEIK input PDB |
Selected Chain(s) | A,H,L |
Distance of aggregation | 10 Å |
FoldX usage | Yes |
Dynamic mode | No |
Automated mutations | No |
Downloads | Download all the data |
Simulation log |
[INFO] Logger: Verbosity set to: 2 - [INFO] (00:00:00) [WARNING] runJob: Working directory already exists (possibly overwriting previous results -ow to prevent this behavior) (00:00:00) [INFO] runJob: Starting aggrescan3d job on: input.pdb with all chain(s) selected (00:00:00) [INFO] runJob: Creating pdb object from: input.pdb (00:00:00) [INFO] FoldX: Starting FoldX energy minimalization (00:00:00) [INFO] Analysis: Starting Aggrescan3D on folded.pdb (00:03:31) [INFO] Main: Simulation completed successfully. (00:03:34) |
The table below lists A3D score for protein residues. Residues with A3D score > 0.0000 are marked by yellow rows.
residue index | residue name | chain | Aggrescan3D score | mutation |
---|---|---|---|---|
residue index | residue name | chain | Aggrescan3D score | |
1 | W | A | -0.5279 | |
2 | N | A | -1.3872 | |
3 | P | A | -0.6563 | |
4 | P | A | 0.0000 | |
5 | T | A | -0.1477 | |
6 | F | A | 0.0000 | |
7 | S | A | -0.1474 | |
8 | P | A | 0.0833 | |
9 | A | A | 0.3310 | |
10 | L | A | 0.8091 | |
11 | L | A | 1.0111 | |
12 | V | A | 1.7706 | |
13 | V | A | 0.3023 | |
14 | T | A | -1.6334 | |
15 | E | A | -3.6056 | |
16 | G | A | -3.0443 | |
17 | D | A | -2.7296 | |
18 | N | A | -2.4434 | |
19 | A | A | 0.0000 | |
20 | T | A | -0.6261 | |
21 | F | A | 0.0000 | |
22 | T | A | -0.3651 | |
23 | C | A | 0.0000 | |
24 | S | A | -0.8807 | |
25 | F | A | 0.0000 | |
26 | S | A | -1.5875 | |
27 | N | A | -1.9355 | |
28 | T | A | -1.2181 | |
29 | S | A | -1.4670 | |
30 | E | A | -2.0566 | |
31 | S | A | -0.8816 | |
32 | F | A | -0.3356 | |
33 | V | A | 0.0000 | |
34 | L | A | 0.0000 | |
35 | N | A | 0.0000 | |
36 | W | A | 0.0000 | |
37 | Y | A | 0.0000 | |
38 | R | A | -0.6321 | |
39 | M | A | -0.5019 | |
40 | S | A | -0.8337 | |
41 | P | A | -1.0057 | |
42 | S | A | -1.1700 | |
43 | N | A | -1.4412 | |
44 | Q | A | 0.0000 | |
45 | T | A | 0.0000 | |
46 | D | A | -0.7740 | |
47 | K | A | 0.0000 | |
48 | L | A | 0.0000 | |
49 | A | A | 0.0000 | |
50 | A | A | -0.7442 | |
51 | F | A | -0.8316 | |
52 | P | A | -1.1276 | |
53 | E | A | -2.4873 | |
54 | D | A | -2.1488 | |
55 | R | A | -1.8563 | |
56 | S | A | -1.5617 | |
57 | Q | A | -1.0187 | |
58 | P | A | -0.8643 | |
59 | G | A | -1.0348 | |
60 | Q | A | -1.2330 | |
61 | D | A | -0.9662 | |
62 | C | A | -0.3381 | |
63 | R | A | -0.8490 | |
64 | F | A | 0.0000 | |
65 | R | A | -1.4115 | |
66 | V | A | 0.0000 | |
67 | T | A | -1.0626 | |
68 | Q | A | -1.3960 | |
69 | L | A | -1.1180 | |
70 | P | A | -1.3119 | |
71 | N | A | -2.1762 | |
72 | G | A | -2.4721 | |
73 | R | A | -2.6866 | |
74 | D | A | -1.6353 | |
75 | F | A | 0.0000 | |
76 | H | A | -0.8456 | |
77 | M | A | 0.0000 | |
78 | S | A | -1.0766 | |
79 | V | A | 0.0000 | |
80 | V | A | -1.5931 | |
81 | R | A | -3.2996 | |
82 | A | A | 0.0000 | |
83 | R | A | -4.0626 | |
84 | R | A | -3.7123 | |
85 | N | A | -2.7637 | |
86 | D | A | 0.0000 | |
87 | S | A | -1.4458 | |
88 | G | A | -0.9625 | |
89 | T | A | -0.7260 | |
90 | Y | A | 0.0000 | |
91 | L | A | 0.0000 | |
92 | C | A | 0.0000 | |
93 | G | A | 0.0000 | |
94 | A | A | 0.0000 | |
95 | I | A | 0.0000 | |
96 | S | A | -0.1958 | |
97 | L | A | 0.3637 | |
98 | A | A | -0.1574 | |
99 | P | A | -0.7605 | |
100 | K | A | -1.5372 | |
101 | A | A | -1.0253 | |
102 | Q | A | -0.9930 | |
103 | I | A | 0.0000 | |
104 | K | A | -0.9651 | |
105 | E | A | -0.4401 | |
106 | S | A | 0.0000 | |
107 | L | A | 0.7994 | |
108 | R | A | -0.7765 | |
109 | A | A | 0.0000 | |
110 | E | A | -0.5687 | |
111 | L | A | 0.0000 | |
112 | R | A | -0.9707 | |
113 | V | A | -1.3989 | |
114 | Q | H | -1.9008 | |
115 | V | H | 0.0000 | |
116 | Q | H | -1.7502 | |
117 | L | H | 0.0000 | |
118 | V | H | -0.4216 | |
119 | Q | H | 0.0000 | |
120 | S | H | -0.6384 | |
121 | G | H | -0.5483 | |
122 | A | H | 0.1406 | |
123 | E | H | 0.0311 | |
124 | V | H | 1.0151 | |
125 | K | H | -1.0118 | |
126 | K | H | -2.1312 | |
127 | P | H | -2.1914 | |
128 | G | H | -1.5553 | |
129 | A | H | -1.2232 | |
130 | S | H | -1.4458 | |
131 | V | H | 0.0000 | |
132 | K | H | -2.1026 | |
133 | V | H | 0.0000 | |
134 | S | H | -0.6966 | |
135 | C | H | 0.0000 | |
136 | K | H | -1.3009 | |
137 | A | H | -0.8577 | |
138 | S | H | -1.0771 | |
139 | G | H | -1.2285 | |
140 | Y | H | -0.6692 | |
141 | T | H | -0.1103 | |
142 | F | H | 0.0000 | |
143 | T | H | -0.1782 | |
144 | S | H | 0.1916 | |
145 | Y | H | 0.4165 | |
146 | W | H | 0.5573 | |
147 | I | H | 0.0000 | |
148 | N | H | -0.2313 | |
149 | W | H | 0.0000 | |
150 | V | H | 0.0000 | |
151 | R | H | 0.0000 | |
152 | Q | H | -0.4239 | |
153 | A | H | 0.0000 | |
154 | P | H | -0.9508 | |
155 | G | H | -1.2874 | |
156 | Q | H | -1.7086 | |
157 | G | H | -1.1525 | |
158 | L | H | 0.0000 | |
159 | E | H | -0.5906 | |
160 | W | H | 0.0000 | |
161 | M | H | 0.0000 | |
162 | G | H | 0.0000 | |
163 | N | H | -0.2118 | |
164 | I | H | 0.0000 | |
165 | Y | H | 0.5523 | |
166 | P | H | 0.0000 | |
167 | G | H | -0.0386 | |
168 | S | H | 0.1410 | |
169 | S | H | 0.3662 | |
170 | L | H | 1.2166 | |
171 | T | H | 0.1656 | |
172 | N | H | -1.1422 | |
173 | Y | H | -1.5957 | |
174 | N | H | 0.0000 | |
175 | E | H | -3.0333 | |
176 | K | H | -2.8691 | |
177 | F | H | 0.0000 | |
178 | K | H | -2.7076 | |
179 | N | H | -2.4381 | |
180 | R | H | -1.6999 | |
181 | V | H | 0.0000 | |
182 | T | H | -1.0650 | |
183 | M | H | 0.0000 | |
184 | T | H | -0.2714 | |
185 | R | H | -0.9115 | |
186 | D | H | -1.1354 | |
187 | T | H | -0.7944 | |
188 | S | H | -0.5424 | |
189 | T | H | -0.6904 | |
190 | S | H | -0.8552 | |
191 | T | H | -0.8580 | |
192 | V | H | 0.0000 | |
193 | Y | H | -0.6695 | |
194 | M | H | 0.0000 | |
195 | E | H | -1.6201 | |
196 | L | H | 0.0000 | |
197 | S | H | -1.2757 | |
198 | S | H | -1.1934 | |
199 | L | H | 0.0000 | |
200 | R | H | -2.7123 | |
201 | S | H | -1.7386 | |
202 | E | H | -1.3799 | |
203 | D | H | 0.0000 | |
204 | T | H | -0.4389 | |
205 | A | H | 0.0000 | |
206 | V | H | 0.3207 | |
207 | Y | H | 0.0000 | |
208 | Y | H | 0.0000 | |
209 | C | H | 0.0000 | |
210 | A | H | 0.0000 | |
211 | R | H | 0.0000 | |
212 | L | H | 0.0000 | |
213 | S | H | -0.2038 | |
214 | T | H | -0.2573 | |
215 | G | H | 0.0000 | |
216 | T | H | 0.0796 | |
217 | F | H | 0.0113 | |
218 | A | H | 0.0000 | |
219 | Y | H | 0.0000 | |
220 | W | H | -0.3883 | |
221 | G | H | 0.0000 | |
222 | Q | H | -1.2492 | |
223 | G | H | -0.4224 | |
224 | T | H | 0.0000 | |
225 | L | H | 0.7354 | |
226 | V | H | 0.0000 | |
227 | T | H | 0.1502 | |
228 | V | H | -0.7518 | |
229 | D | L | -1.5022 | |
230 | I | L | 0.0079 | |
231 | V | L | 0.5357 | |
232 | M | L | 0.0000 | |
233 | T | L | -0.6286 | |
234 | Q | L | -1.2841 | |
235 | S | L | -1.3919 | |
236 | P | L | -1.5433 | |
237 | D | L | -2.4993 | |
238 | S | L | -1.9494 | |
239 | L | L | -1.2938 | |
240 | A | L | -1.0804 | |
241 | V | L | 0.0000 | |
242 | S | L | -1.2357 | |
243 | L | L | -0.5287 | |
244 | G | L | -1.6332 | |
245 | E | L | -2.3942 | |
246 | R | L | -2.4981 | |
247 | A | L | 0.0000 | |
248 | T | L | -0.8309 | |
249 | I | L | 0.0000 | |
250 | N | L | -1.7070 | |
251 | C | L | 0.0000 | |
252 | K | L | -2.1647 | |
253 | S | L | 0.0000 | |
254 | S | L | -0.9820 | |
255 | Q | L | -1.5496 | |
256 | S | L | -0.9374 | |
257 | L | L | 0.0000 | |
258 | W | L | -0.2014 | |
259 | D | L | -0.5707 | |
260 | S | L | -0.8793 | |
261 | G | L | -1.2060 | |
262 | N | L | 0.0000 | |
263 | Q | L | -1.4929 | |
264 | K | L | -0.8440 | |
265 | N | L | -0.4316 | |
266 | F | L | 0.0000 | |
267 | L | L | 0.0000 | |
268 | T | L | 0.0000 | |
269 | W | L | 0.0000 | |
270 | Y | L | 0.0000 | |
271 | Q | L | 0.0000 | |
272 | Q | L | -1.0464 | |
273 | K | L | -1.7947 | |
274 | P | L | -0.9915 | |
275 | G | L | -1.1273 | |
276 | Q | L | -1.4982 | |
277 | P | L | -1.1446 | |
278 | P | L | 0.0000 | |
279 | K | L | -0.8987 | |
280 | L | L | 0.0000 | |
281 | L | L | 0.0000 | |
282 | I | L | 0.0000 | |
283 | Y | L | 0.0000 | |
284 | W | L | 0.0000 | |
285 | T | L | 0.0000 | |
286 | S | L | -0.3838 | |
287 | Y | L | -0.0783 | |
288 | R | L | 0.0000 | |
289 | E | L | 0.0000 | |
290 | S | L | 0.0000 | |
291 | G | L | -1.0179 | |
292 | V | L | -0.6614 | |
293 | P | L | -1.1181 | |
294 | D | L | -2.0789 | |
295 | R | L | -1.5781 | |
296 | F | L | 0.0000 | |
297 | S | L | -0.7300 | |
298 | G | L | -0.4008 | |
299 | S | L | -0.8400 | |
300 | G | L | -1.1198 | |
301 | S | L | -0.8624 | |
302 | G | L | -0.9003 | |
303 | T | L | -1.4837 | |
304 | D | L | -2.2433 | |
305 | F | L | 0.0000 | |
306 | T | L | -0.9633 | |
307 | L | L | 0.0000 | |
308 | T | L | 0.0000 | |
309 | I | L | 0.0000 | |
310 | S | L | -1.7873 | |
311 | S | L | -1.6860 | |
312 | L | L | 0.0000 | |
313 | Q | L | -1.6453 | |
314 | A | L | -0.9579 | |
315 | E | L | -2.1389 | |
316 | D | L | 0.0000 | |
317 | V | L | -0.6551 | |
318 | A | L | 0.0000 | |
319 | V | L | -0.9501 | |
320 | Y | L | 0.0000 | |
321 | Y | L | 0.0000 | |
322 | C | L | 0.0000 | |
323 | Q | L | 0.0000 | |
324 | N | L | 0.0000 | |
325 | D | L | -0.0276 | |
326 | Y | L | 0.7256 | |
327 | F | L | 1.3136 | |
328 | Y | L | 0.4728 | |
329 | P | L | 0.0000 | |
330 | H | L | 0.4700 | |
331 | T | L | 0.0000 | |
332 | F | L | 0.0000 | |
333 | G | L | 0.0000 | |
334 | G | L | -1.3520 | |
335 | G | L | 0.0000 | |
336 | T | L | 0.0000 | |
337 | K | L | -2.3227 | |
338 | V | L | 0.0000 | |
339 | E | L | -1.8803 | |
340 | I | L | -0.4991 | |
341 | K | L | -1.5838 |