| Chain sequence(s) |
H: QVQLVESGGGLVQPGGSLRLSCAASGASRPLSSYSWAWFRQAPGQGLEAVAAIGGDGSTTIYHPAVKGRFTISRDNSKNTLYLQMNSLRAEDTAVYYCAAGGGGPSAGKDYWGQGTLVTVS
input PDB |
| Selected Chain(s) | H |
| Distance of aggregation | 10 Å |
| FoldX usage | Yes |
| Dynamic mode | No |
| Automated mutations | No |
| Downloads | Download all the data |
| Simulation log |
[INFO] Logger: Verbosity set to: 2 - [INFO] (00:00:01)
[WARNING] runJob: Working directory already exists (possibly overwriting previous results -ow
to prevent this behavior) (00:00:01)
[INFO] runJob: Starting aggrescan3d job on: input.pdb with H chain(s) selected (00:00:01)
[INFO] runJob: Creating pdb object from: input.pdb (00:00:01)
[INFO] FoldX: Starting FoldX energy minimalization (00:00:01)
[INFO] Analysis: Starting Aggrescan3D on folded.pdb (00:01:53)
[INFO] Main: Simulation completed successfully. (00:01:54)
|
The table below lists A3D score for protein residues. Residues with A3D score > 0.0000 are marked by yellow rows.
| residue index | residue name | chain | Aggrescan3D score | mutation |
|---|---|---|---|---|
| residue index | residue name | chain | Aggrescan3D score | |
| 1 | Q | H | -2.0639 | |
| 2 | V | H | 0.0000 | |
| 3 | Q | H | -1.2324 | |
| 4 | L | H | 0.0000 | |
| 5 | V | H | 0.7470 | |
| 6 | E | H | 0.0000 | |
| 7 | S | H | -0.2981 | |
| 8 | G | H | -0.7044 | |
| 9 | G | H | 0.1892 | |
| 10 | G | H | 0.8767 | |
| 11 | L | H | 1.4380 | |
| 12 | V | H | -0.1200 | |
| 13 | Q | H | -1.4472 | |
| 14 | P | H | -1.8955 | |
| 15 | G | H | -1.6366 | |
| 16 | G | H | -1.0529 | |
| 17 | S | H | -1.3434 | |
| 18 | L | H | -0.8781 | |
| 19 | R | H | -1.9612 | |
| 20 | L | H | 0.0000 | |
| 21 | S | H | -0.4240 | |
| 22 | C | H | 0.0000 | |
| 23 | A | H | -0.2738 | |
| 24 | A | H | 0.0000 | |
| 25 | S | H | -1.0428 | |
| 26 | G | H | -1.4744 | |
| 27 | A | H | -1.5397 | |
| 28 | S | H | -1.5226 | |
| 29 | R | H | -2.1657 | |
| 30 | P | H | -1.4193 | |
| 31 | L | H | 0.0000 | |
| 32 | S | H | -1.5569 | |
| 33 | S | H | -1.3239 | |
| 34 | Y | H | 0.0000 | |
| 35 | S | H | -0.9819 | |
| 36 | W | H | 0.0000 | |
| 37 | A | H | 0.4757 | |
| 38 | W | H | 0.0000 | |
| 39 | F | H | 0.4588 | |
| 40 | R | H | 0.0000 | |
| 41 | Q | H | -0.2312 | |
| 42 | A | H | -0.8018 | |
| 43 | P | H | -1.1673 | |
| 44 | G | H | -1.2075 | |
| 45 | Q | H | -1.5908 | |
| 46 | G | H | -0.6949 | |
| 47 | L | H | 0.7276 | |
| 48 | E | H | -0.0284 | |
| 49 | A | H | 0.3776 | |
| 50 | V | H | 0.0000 | |
| 51 | A | H | 0.0000 | |
| 52 | A | H | 0.6317 | |
| 53 | I | H | 0.0000 | |
| 54 | G | H | -0.8144 | |
| 55 | G | H | -1.5221 | |
| 56 | D | H | -2.2217 | |
| 57 | G | H | -1.5003 | |
| 58 | S | H | -0.9511 | |
| 59 | T | H | -0.1465 | |
| 60 | T | H | 0.8485 | |
| 61 | I | H | 1.7320 | |
| 62 | Y | H | 0.3290 | |
| 63 | H | H | -0.4558 | |
| 64 | P | H | -0.7927 | |
| 65 | A | H | -0.9361 | |
| 66 | V | H | 0.0000 | |
| 67 | K | H | -1.8542 | |
| 68 | G | H | -1.5933 | |
| 69 | R | H | -1.4281 | |
| 70 | F | H | 0.0000 | |
| 71 | T | H | -0.6909 | |
| 72 | I | H | 0.0000 | |
| 73 | S | H | -0.4869 | |
| 74 | R | H | -1.3435 | |
| 75 | D | H | -1.7685 | |
| 76 | N | H | -2.2743 | |
| 77 | S | H | -1.7565 | |
| 78 | K | H | -2.4827 | |
| 79 | N | H | -1.8641 | |
| 80 | T | H | -1.1035 | |
| 81 | L | H | 0.0000 | |
| 82 | Y | H | -0.5854 | |
| 83 | L | H | 0.0000 | |
| 84 | Q | H | -1.3721 | |
| 85 | M | H | 0.0000 | |
| 86 | N | H | -1.5861 | |
| 87 | S | H | -1.4788 | |
| 88 | L | H | 0.0000 | |
| 89 | R | H | -2.9870 | |
| 90 | A | H | -2.0678 | |
| 91 | E | H | -2.4878 | |
| 92 | D | H | 0.0000 | |
| 93 | T | H | -0.5036 | |
| 94 | A | H | 0.0000 | |
| 95 | V | H | 1.0333 | |
| 96 | Y | H | 0.0000 | |
| 97 | Y | H | 0.6684 | |
| 98 | C | H | 0.0000 | |
| 99 | A | H | 0.1279 | |
| 100 | A | H | 0.0000 | |
| 101 | G | H | -1.5044 | |
| 102 | G | H | -1.8372 | |
| 103 | G | H | -1.1896 | |
| 104 | G | H | -0.9847 | |
| 105 | P | H | -0.7532 | |
| 106 | S | H | -1.3425 | |
| 107 | A | H | -1.1558 | |
| 108 | G | H | -1.8880 | |
| 109 | K | H | -2.9643 | |
| 110 | D | H | -2.5834 | |
| 111 | Y | H | -1.0076 | |
| 112 | W | H | 0.5756 | |
| 113 | G | H | 0.0000 | |
| 114 | Q | H | -0.7530 | |
| 115 | G | H | 0.1856 | |
| 116 | T | H | 0.5951 | |
| 117 | L | H | 1.7617 | |
| 118 | V | H | 0.0000 | |
| 119 | T | H | 0.3172 | |
| 120 | V | H | 0.0000 | |
| 121 | S | H | -0.8393 |