CABS-dock: 3a2346cbdaba16b

Project name: 3a2346cbdaba16b

Status: done

submitted: 2026-06-03 16:51:04, status changed: 2026-06-03 18:27:17

Project settings

Protein sequence(s)	RSLTFYPAWLTVSEGANATFTCSLSNWSEDLMLNWNRLSPSNQTEKQAAFSNGLSQPVQDARFQIIQLPNRHDFHMNILDTRRNDSGIYLCGAISLHPKAKIEESPGAELVVTERI input pdb
Peptide sequence	ISYGGADYK
Simulation mc cycles	50
Peptide secondary structure psipred	CCCCCCCCC

Re-submit project

Zoom/rotate predicted model of the complex using mouse. Click the "View" button on the right panel to load the appropriate model. View in JSmol (pure html5/js) if you got rendering problems.

Models are ranked and numbered according to their occurrence in docking trajectory (1 = most probable result).

Representative conformations

	model_1		Download
	model_2		Download
	model_3		Download
	model_4		Download
	model_5		Download
	model_6		Download
	model_7		Download
	model_8		Download
	model_9		Download
	model_10		Download

Download all files

Click the "View" button to load the contact map of appropriate model.

Representative conformations

Contact cutoff (Å)

	model_1	View
	model_2	View
	model_3	View
	model_4	View
	model_5	View
	model_6	View
	model_7	View
	model_8	View
	model_9	View
	model_10	View

Receptor residue	Peptide residue

Receptor residue	Peptide residue

Receptor residue	Peptide residue

Select trajectory from the right panel to display animation in JSmol. Note that it may hangs browser window for few minutes or ever.

Trajectories

	replica_1		Download
	replica_2		Download
	replica_3		Download
	replica_4		Download
	replica_5		Download
	replica_6		Download
	replica_7		Download
	replica_8		Download
	replica_9		Download
	replica_10		Download

Selected model: model_1.pdb (most representative model of the best cluster) download the model

Details about clusters

cluster name	cluster density	average rmsd	max rmsd	number of elements
cluster_1.pdb ( medoid)	29.0637	4.40412	22.0286	128
cluster_2.pdb ( medoid)	25.7803	5.62446	23.6825	145
cluster_3.pdb ( medoid)	24.9776	3.88348	11.4794	97
cluster_4.pdb ( medoid)	22.1889	5.04757	14.6558	112
cluster_5.pdb ( medoid)	16.2283	5.97721	19.3725	97
cluster_6.pdb ( medoid)	14.8775	6.11661	22.7381	91
cluster_7.pdb ( medoid)	10.7473	8.28115	21.9653	89
cluster_8.pdb ( medoid)	9.71622	9.67455	26.3554	94
cluster_9.pdb ( medoid)	7.27413	11.8227	28.9065	86
cluster_10.pdb ( medoid)	4.72326	12.9148	29.4376	61