CABS-dock: 4ff125702e82b46

Project name: 4ff125702e82b46

Status: done

submitted: 2026-06-02 11:12:29, status changed: 2026-06-02 19:16:57

Project settings

Protein sequence(s)	DHCPLGPGRCCRLHTVRASLEDLGWADWVLSPREVQVTMCIGACPSQFRAANMHAQIKTSLHRLKPDTVPAPCCVPASYNPMVLIQKTDTGVSLQTYDDLLAKDCHCIWSCLEVAEACVGDVVCNAQLASYLKACSANGNPCDLKQCQAAIRFFYQNIPFNIAQMLAFCDCAQSDIPCQQSKEALHSKTCAVNMVPPPTCLSVIRSCQNDELCRRHYRTFQSKCWQRVTRKCHEDENCISTLSKQDLTCSGSDDCKAAYIDILGTVLQVQCTCRTITQSEESLCKIFQHMLHRKSCFN input pdb
Peptide sequence	CCVPASYNPMVLIQKTDTGVSLQTYD
Simulation mc cycles	50
Peptide secondary structure psipred	CCCCCCCCCEEEEEECCCCEECEECC

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Zoom/rotate predicted model of the complex using mouse. Click the "View" button on the right panel to load the appropriate model. View in JSmol (pure html5/js) if you got rendering problems.

Models are ranked and numbered according to their occurrence in docking trajectory (1 = most probable result).

Representative conformations

	model_1		Download
	model_2		Download
	model_3		Download
	model_4		Download
	model_5		Download
	model_6		Download
	model_7		Download
	model_8		Download
	model_9		Download
	model_10		Download

Download all files

Click the "View" button to load the contact map of appropriate model.

Representative conformations

Contact cutoff (Å)

	model_1	View
	model_2	View
	model_3	View
	model_4	View
	model_5	View
	model_6	View
	model_7	View
	model_8	View
	model_9	View
	model_10	View

Receptor residue	Peptide residue

Receptor residue	Peptide residue

Receptor residue	Peptide residue

Select trajectory from the right panel to display animation in JSmol. Note that it may hangs browser window for few minutes or ever.

Trajectories

	replica_1		Download
	replica_2		Download
	replica_3		Download
	replica_4		Download
	replica_5		Download
	replica_6		Download
	replica_7		Download
	replica_8		Download
	replica_9		Download
	replica_10		Download

Selected model: model_1.pdb (most representative model of the best cluster) download the model

Details about clusters

cluster name	cluster density	average rmsd	max rmsd	number of elements
cluster_1.pdb ( medoid)	27.1805	4.59888	26.915	125
cluster_2.pdb ( medoid)	17.947	8.13504	40.6386	146
cluster_3.pdb ( medoid)	14.9731	3.87362	15.2262	58
cluster_4.pdb ( medoid)	14.8739	9.81587	25.6383	146
cluster_5.pdb ( medoid)	12.969	4.39509	16.4629	57
cluster_6.pdb ( medoid)	9.4976	11.3713	42.2853	108
cluster_7.pdb ( medoid)	9.46178	12.4712	41.5905	118
cluster_8.pdb ( medoid)	6.93762	10.6665	18.7963	74
cluster_9.pdb ( medoid)	5.89018	9.8469	19.6063	58
cluster_10.pdb ( medoid)	1.67382	16.1308	39.235	27