CABS-dock: 70765449e96a359

Project name: 70765449e96a359

Status: done

submitted: 2026-01-21 11:01:13, status changed: 2026-01-21 13:10:01

Project settings

Protein sequence(s)	GTVFTTVEDLLGSKILLTCSLDDSTEVTGHRWLKGGVVLKEDALPGQKTEFKVDSSDDQWGEYSCVFLPEPMGTANIQLHG input pdb
Peptide sequence	RSLANDWQSSNLTGT
Simulation mc cycles	50
Peptide secondary structure psipred	CCCCHHHHHCCCCCC

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Zoom/rotate predicted model of the complex using mouse. Click the "View" button on the right panel to load the appropriate model. View in JSmol (pure html5/js) if you got rendering problems.

Models are ranked and numbered according to their occurrence in docking trajectory (1 = most probable result).

Representative conformations

	model_1		Download
	model_2		Download
	model_3		Download
	model_4		Download
	model_5		Download
	model_6		Download
	model_7		Download
	model_8		Download
	model_9		Download
	model_10		Download

Download all files

Click the "View" button to load the contact map of appropriate model.

Representative conformations

Contact cutoff (Å)

	model_1	View
	model_2	View
	model_3	View
	model_4	View
	model_5	View
	model_6	View
	model_7	View
	model_8	View
	model_9	View
	model_10	View

Receptor residue	Peptide residue

Receptor residue	Peptide residue

Receptor residue	Peptide residue

Select trajectory from the right panel to display animation in JSmol. Note that it may hangs browser window for few minutes or ever.

Trajectories

	replica_1		Download
	replica_2		Download
	replica_3		Download
	replica_4		Download
	replica_5		Download
	replica_6		Download
	replica_7		Download
	replica_8		Download
	replica_9		Download
	replica_10		Download

Selected model: model_1.pdb (most representative model of the best cluster) download the model

Details about clusters

cluster name	cluster density	average rmsd	max rmsd	number of elements
cluster_1.pdb ( medoid)	31.2973	3.93006	26.4385	123
cluster_2.pdb ( medoid)	20.0239	5.4435	11.3401	109
cluster_3.pdb ( medoid)	19.0072	7.2078	16.2851	137
cluster_4.pdb ( medoid)	18.4698	7.9048	22.8376	146
cluster_5.pdb ( medoid)	17.5192	6.96379	17.9248	122
cluster_6.pdb ( medoid)	13.367	9.35142	16.8266	125
cluster_7.pdb ( medoid)	9.9094	7.46766	18.6413	74
cluster_8.pdb ( medoid)	9.06028	5.73934	12.2671	52
cluster_9.pdb ( medoid)	6.71071	10.8781	25.8421	73
cluster_10.pdb ( medoid)	6.25912	6.23091	12.835	39