Chain sequence(s) |
A: MAEEKHHHHLFHHKKEGEDFQPAADGGADVYGYSTETVVTGTGNEGEYERITKEEKHHKHKEHLGEMGAVAAGAFALYEKHEAKKDPEHAHKHKIEEELAAAAAVGAGGFVFHEHHEKKQDHKEAKEASGEKKHHLFG
input PDB |
Selected Chain(s) | A |
Distance of aggregation | 10 Å |
FoldX usage | No |
pH calculations | No |
alphaCutter usage | No |
Dynamic mode | No |
Automated mutations | No |
Downloads | Download all the data |
Simulation log |
[INFO] Logger: Verbosity set to: 2 - [INFO] (00:00:00) [WARNING] runJob: Working directory already exists (possibly overwriting previous results -ow to prevent this behavior) (00:00:00) [INFO] runJob: Starting aggrescan3d job on: input.pdb with A chain(s) selected (00:00:00) [INFO] runJob: Creating pdb object from: input.pdb (00:00:00) [INFO] runJob: FoldX not utilized. Treating input pdb file as it was already optimized. (00:00:00) [INFO] Analysis: Starting Aggrescan4D on folded.pdb (00:00:01) [INFO] Main: Simulation completed successfully. (00:00:01) |
The table below lists A4D score for protein residues. Residues with A4D score > 0.0000 are marked by yellow rows.
residue index | residue name | chain | Aggrescan4D score | mutation |
---|---|---|---|---|
1 | M | A | 0.4465 | |
2 | A | A | -0.9543 | |
3 | E | A | -2.9567 | |
4 | E | A | -3.7705 | |
5 | K | A | -3.8839 | |
6 | H | A | -3.3208 | |
7 | H | A | -2.8180 | |
8 | H | A | -1.8078 | |
9 | H | A | -0.4976 | |
10 | L | A | 1.4344 | |
11 | F | A | 1.5077 | |
12 | H | A | -0.8780 | |
13 | H | A | -2.1721 | |
14 | K | A | -3.5404 | |
15 | K | A | -3.8620 | |
16 | E | A | -3.6796 | |
17 | G | A | -3.1156 | |
18 | E | A | -3.0449 | |
19 | D | A | -2.2207 | |
20 | F | A | -0.0325 | |
21 | Q | A | -1.1391 | |
22 | P | A | -0.7185 | |
23 | A | A | -0.4849 | |
24 | A | A | -1.1624 | |
25 | D | A | -2.1063 | |
26 | G | A | -1.7091 | |
27 | G | A | -1.3366 | |
28 | A | A | -0.7010 | |
29 | D | A | -0.7952 | |
30 | V | A | 1.5179 | |
31 | Y | A | 1.7945 | |
32 | G | A | 1.0195 | |
33 | Y | A | 1.2654 | |
34 | S | A | -0.1680 | |
35 | T | A | -0.5294 | |
36 | E | A | -0.9714 | |
37 | T | A | 0.4296 | |
38 | V | A | 1.9621 | |
39 | V | A | 2.1493 | |
40 | T | A | 1.0641 | |
41 | G | A | 0.0302 | |
42 | T | A | -0.8811 | |
43 | G | A | -2.0489 | |
44 | N | A | -2.7832 | |
45 | E | A | -3.0544 | |
46 | G | A | -2.6975 | |
47 | E | A | -2.3334 | |
48 | Y | A | -0.8082 | |
49 | E | A | -2.3897 | |
50 | R | A | -2.4045 | |
51 | I | A | -0.2765 | |
52 | T | A | -1.4094 | |
53 | K | A | -3.3913 | |
54 | E | A | -4.3410 | |
55 | E | A | -4.1686 | |
56 | K | A | -4.3758 | |
57 | H | A | -4.3383 | |
58 | H | A | -4.5917 | |
59 | K | A | -4.1694 | |
60 | H | A | -3.6923 | |
61 | K | A | -4.0105 | |
62 | E | A | -4.2734 | |
63 | H | A | -2.9491 | |
64 | L | A | -0.8428 | |
65 | G | A | -1.6351 | |
66 | E | A | -1.7272 | |
67 | M | A | 0.3340 | |
68 | G | A | 0.0738 | |
69 | A | A | 0.5998 | |
70 | V | A | 1.9256 | |
71 | A | A | 1.2800 | |
72 | A | A | 1.4597 | |
73 | G | A | 1.7081 | |
74 | A | A | 2.0545 | |
75 | F | A | 2.4734 | |
76 | A | A | 1.2501 | |
77 | L | A | 1.4071 | |
78 | Y | A | 0.9818 | |
79 | E | A | -1.4368 | |
80 | K | A | -2.5552 | |
81 | H | A | -2.7252 | |
82 | E | A | -3.5070 | |
83 | A | A | -3.8753 | |
84 | K | A | -4.5111 | |
85 | K | A | -4.2615 | |
86 | D | A | -3.9763 | |
87 | P | A | -3.1570 | |
88 | E | A | -3.3345 | |
89 | H | A | -2.9861 | |
90 | A | A | -2.4477 | |
91 | H | A | -2.5036 | |
92 | K | A | -2.8185 | |
93 | H | A | -3.1169 | |
94 | K | A | -3.1738 | |
95 | I | A | -1.2108 | |
96 | E | A | -2.8217 | |
97 | E | A | -3.2961 | |
98 | E | A | -2.2948 | |
99 | L | A | -0.0497 | |
100 | A | A | -0.5196 | |
101 | A | A | -0.1770 | |
102 | A | A | 0.1329 | |
103 | A | A | 0.4045 | |
104 | A | A | 0.9190 | |
105 | V | A | 2.2502 | |
106 | G | A | 1.2440 | |
107 | A | A | 1.5173 | |
108 | G | A | 1.5481 | |
109 | G | A | 1.5323 | |
110 | F | A | 2.3737 | |
111 | V | A | 2.2902 | |
112 | F | A | 1.5520 | |
113 | H | A | -0.8039 | |
114 | E | A | -2.1813 | |
115 | H | A | -2.3720 | |
116 | H | A | -3.6281 | |
117 | E | A | -4.9777 | |
118 | K | A | -5.4467 | |
119 | K | A | -5.3517 | |
120 | Q | A | -5.1459 | |
121 | D | A | -5.7053 | |
122 | H | A | -5.3304 | |
123 | K | A | -5.5278 | |
124 | E | A | -5.2102 | |
125 | A | A | -3.8065 | |
126 | K | A | -4.5906 | |
127 | E | A | -4.3722 | |
128 | A | A | -2.5265 | |
129 | S | A | -2.5900 | |
130 | G | A | -2.9715 | |
131 | E | A | -3.8801 | |
132 | K | A | -3.9439 | |
133 | K | A | -3.5888 | |
134 | H | A | -2.4250 | |
135 | H | A | -0.9216 | |
136 | L | A | 1.4393 | |
137 | F | A | 2.1188 | |
138 | G | A | 0.7631 |