Project name: jrk_3AP27

Status: done

Started: 2026-02-06 22:10:21
Chain sequence(s) A: AKFPKNFMFGYSWSGFQFEMGLPGSEVESDWWVWVHDKENIASGLVSGDLPENGPAYWHLYKQDHDIAEKLGMDCIRGGIEWARIFPKPTFDVKVDVEKDEEGNIISVDVPESTIKELEKIANMEALEHYRKIYSDWKERGKTFILNLYHWPLPLWIHDPIAVRKLGPDRAPAGWLDEKTVVEFVKFAAFVAYHLDDLVDMWSTMNEPNVVYNQGYINLRSGFPPGYLSFEAAEKAKFNLIQAHIGAYDAIKEYSEKSVGVIYAFAWHDPLAEEYKDEVEEIRKKDYEFVTILHSKGKLDWIGVNYYSRLVYGAKDGHLVPLPGYGFMSERGGFAKSGRPASDFGWEMYPEGLENLLKYLNNAYELPMIITENGMADAADRYRPHYLVSHLKAVYNAMKEGADVRGYLHWSLTDNYEWAQGFRMRFGLVYVDFETKKRYLRPSALVFREIATQKEIPEELAHLADLKFVTR
C: AKFPKNFMFGYSWSGFQFEMGLPGSEVESDWWVWVHDKENIASGLVSGDLPENGPAYWHLYKQDHDIAEKLGMDCIRGGIEWARIFPKPTFDVKVDVEKDEEGNIISVDVPESTIKELEKIANMEALEHYRKIYSDWKERGKTFILNLYHWPLPLWIHDPIAVRKLGPDRAPAGWLDEKTVVEFVKFAAFVAYHLDDLVDMWSTMNEPNVVYNQGYINLRSGFPPGYLSFEAAEKAKFNLIQAHIGAYDAIKEYSEKSVGVIYAFAWHDPLAEEYKDEVEEIRKKDYEFVTILHSKGKLDWIGVNYYSRLVYGAKDGHLVPLPGYGFMSERGGFAKSGRPASDFGWEMYPEGLENLLKYLNNAYELPMIITENGMADAADRYRPHYLVSHLKAVYNAMKEGADVRGYLHWSLTDNYEWAQGFRMRFGLVYVDFETKKRYLRPSALVFREIATQKEIPEELAHLADLKFVTR
B: AKFPKNFMFGYSWSGFQFEMGLPGSEVESDWWVWVHDKENIASGLVSGDLPENGPAYWHLYKQDHDIAEKLGMDCIRGGIEWARIFPKPTFDVKVDVEKDEEGNIISVDVPESTIKELEKIANMEALEHYRKIYSDWKERGKTFILNLYHWPLPLWIHDPIAVRKLGPDRAPAGWLDEKTVVEFVKFAAFVAYHLDDLVDMWSTMNEPNVVYNQGYINLRSGFPPGYLSFEAAEKAKFNLIQAHIGAYDAIKEYSEKSVGVIYAFAWHDPLAEEYKDEVEEIRKKDYEFVTILHSKGKLDWIGVNYYSRLVYGAKDGHLVPLPGYGFMSERGGFAKSGRPASDFGWEMYPEGLENLLKYLNNAYELPMIITENGMADAADRYRPHYLVSHLKAVYNAMKEGADVRGYLHWSLTDNYEWAQGFRMRFGLVYVDFETKKRYLRPSALVFREIATQKEIPEELAHLADLKFVTR
D: AKFPKNFMFGYSWSGFQFEMGLPGSEVESDWWVWVHDKENIASGLVSGDLPENGPAYWHLYKQDHDIAEKLGMDCIRGGIEWARIFPKPTFDVKVDVEKDEEGNIISVDVPESTIKELEKIANMEALEHYRKIYSDWKERGKTFILNLYHWPLPLWIHDPIAVRKLGPDRAPAGWLDEKTVVEFVKFAAFVAYHLDDLVDMWSTMNEPNVVYNQGYINLRSGFPPGYLSFEAAEKAKFNLIQAHIGAYDAIKEYSEKSVGVIYAFAWHDPLAEEYKDEVEEIRKKDYEFVTILHSKGKLDWIGVNYYSRLVYGAKDGHLVPLPGYGFMSERGGFAKSGRPASDFGWEMYPEGLENLLKYLNNAYELPMIITENGMADAADRYRPHYLVSHLKAVYNAMKEGADVRGYLHWSLTDNYEWAQGFRMRFGLVYVDFETKKRYLRPSALVFREIATQKEIPEELAHLADLKFVTR
input PDB
Selected Chain(s) A,B,C,D
Distance of aggregation 10 Å
FoldX usage Yes
pH calculations Yes
alphaCutter usage No
Dynamic mode No
Automated mutations No
Downloads Download all the data
Simulation log
[INFO]       Logger:   Verbosity set to: 2 - [INFO]                                                (00:00:01)
[WARNING]    runJob:   Working directory already exists (possibly overwriting previous results -ow 
                       to prevent this behavior)                                                   (00:00:01)
[INFO]       runJob:   Starting aggrescan3d job on: input.pdb with all chain(s) selected           (00:00:01)
[INFO]       runJob:   Creating pdb object from: input.pdb                                         (00:00:01)
[INFO]       PDB-Info: The input structure is globular. Max score is recommended for pH analysis.  (00:00:13)
[INFO]       FoldX:    Starting FoldX energy minimization                                          (00:00:14)
[INFO]       Analysis: Starting Aggrescan4D on folded.pdb                                          (00:49:19)
[INFO]       agg3D:    Running pKa-ANI on                                                          
                       /STORAGE/DATA/lcbio/aggreskan/1681d1c180a85d/tmp/folded.pdb                 (00:49:19)
[INFO]       Main:     Simulation completed successfully.                                          (01:31:25)
Show buried residues

Minimal score value
-4.8152
Maximal score value
0.9321
Average score
-0.7831
Total score value
-1472.2554

The table below lists A4D score for protein residues. Residues with A4D score > 0.0000 are marked by yellow rows.

residue index residue name chain Aggrescan4D score mutation
1 A A -1.2253
2 K A -2.3159
3 F A 0.0000
4 P A -2.0191
5 K A -2.8036
6 N A -2.3532
7 F A 0.0000
8 M A -1.1630
9 F A 0.0000
10 G A 0.0000
11 Y A 0.0000
12 S A 0.0000
13 W A 0.0000
14 S A 0.0000
15 G A -0.0399
16 F A 0.0000
17 Q A 0.0000
18 F A 0.0000
19 E A 0.0000
20 M A 0.0000
21 G A 0.0000
22 L A -0.5715
23 P A -0.9558
24 G A -1.1476
25 S A 0.0000
26 E A -2.3208
27 V A 0.0000
28 E A -1.9833
29 S A 0.0000
30 D A 0.0000
31 W A 0.0000
32 W A -0.4859
33 V A -0.1856
34 W A 0.0000
35 V A 0.0000
36 H A -1.0856
37 D A -1.2059
38 K A -1.8531
39 E A -1.1477
40 N A 0.0000
41 I A -0.6150
42 A A -0.3658
43 S A -0.3722
44 G A -0.2967
45 L A 0.0000
46 V A 0.0000
47 S A -0.7459
48 G A -0.8694
49 D A -1.2936
50 L A -0.7253
51 P A 0.0000
52 E A -1.1388
53 N A -1.1971
54 G A 0.0000
55 P A 0.0000
56 A A 0.0000
57 Y A 0.0000
58 W A -0.7368
59 H A -1.1563
60 L A -0.8570
61 Y A -1.3520
62 K A -2.2177
63 Q A -2.4076
64 D A 0.0000
65 H A 0.0000
66 D A -2.9166
67 I A -1.7360
68 A A 0.0000
69 E A -2.6252
70 K A -1.9657
71 L A 0.0000
72 G A -1.3381
73 M A 0.0000
74 D A -1.9224
75 C A 0.0000
76 I A 0.0000
77 R A 0.0000
78 G A 0.0000
79 G A -0.0567
80 I A 0.0000
81 E A 0.0000
82 W A 0.0000
83 A A 0.0000
84 R A -1.2057
85 I A 0.0000
86 F A 0.0000
87 P A -0.9391
88 K A -1.0778
89 P A -0.4638
90 T A 0.0000
91 F A -0.2005
92 D A -1.6351
93 V A -1.2536
94 K A -2.2435
95 V A -2.3364
96 D A -3.0880
97 V A -2.0246
98 E A -2.4584
99 K A -2.6832
100 D A -3.1718
101 E A -3.5723
102 E A -3.3935
103 G A -2.8284
104 N A -1.8657
105 I A 0.0000
106 I A 0.5181
107 S A -0.8897
108 V A -1.4634
109 D A -2.7580
110 V A 0.0000
111 P A -2.1271
112 E A -2.2439
113 S A -2.1471
114 T A 0.0000
115 I A 0.0000
116 K A -3.4239
117 E A -3.1534
118 L A 0.0000
119 E A -3.0136
120 K A -2.9340
121 I A -1.6416
122 A A 0.0000
123 N A -1.7357
124 M A -1.6807
125 E A -2.5448
126 A A 0.0000
127 L A 0.0000
128 E A -2.9844
129 H A -2.0728
130 Y A 0.0000
131 R A -2.0664
132 K A -2.0841
133 I A 0.0000
134 Y A 0.0000
135 S A -1.8264
136 D A -2.1377
137 W A 0.0000
138 K A -2.5933
139 E A -2.7545
140 R A -2.4589
141 G A -1.9825
142 K A -1.8246
143 T A -1.0074
144 F A 0.0000
145 I A 0.0000
146 L A 0.0000
147 N A 0.0000
148 L A 0.0000
149 Y A 0.0000
150 H A 0.0000
151 W A 0.0000
152 P A 0.0000
153 L A 0.0000
154 P A 0.0000
155 L A 0.0805
156 W A 0.1477
157 I A 0.0000
158 H A 0.0000
159 D A -0.2296
160 P A 0.0000
161 I A 0.1250
162 A A -0.2497
163 V A 0.0000
164 R A 0.0000
165 K A -0.1997
166 L A -0.3887
167 G A -0.9128
168 P A -1.0307
169 D A -1.9621
170 R A -1.4422
171 A A -0.8871
172 P A -0.6891
173 A A 0.0000
174 G A 0.0000
175 W A 0.0000
176 L A 0.0000
177 D A -2.0169
178 E A -2.5679
179 K A -1.7592
180 T A 0.0000
181 V A 0.0000
182 V A -0.7387
183 E A 0.0000
184 F A 0.0000
185 V A 0.0000
186 K A 0.0000
187 F A 0.0000
188 A A 0.0000
189 A A 0.0000
190 F A 0.0000
191 V A 0.0000
192 A A 0.0000
193 Y A -0.1452
194 H A -0.5972
195 L A 0.0000
196 D A -1.7299
197 D A -2.2510
198 L A 0.0000
199 V A 0.0000
200 D A -1.4520
201 M A -0.7478
202 W A 0.0000
203 S A 0.0000
204 T A 0.0000
205 M A 0.0000
206 N A 0.0000
207 E A -0.0660
208 P A 0.0000
209 N A -0.2610
210 V A 0.0722
211 V A 0.0582
212 Y A -0.5724
213 N A -0.6947
214 Q A -0.4871
215 G A 0.0000
216 Y A 0.0000
217 I A -0.2309
218 N A -0.8116
219 L A 0.0000
220 R A -1.5448
221 S A -0.8004
222 G A 0.0000
223 F A -0.0717
224 P A 0.1351
225 P A 0.0000
226 G A 0.0000
227 Y A 0.1233
228 L A 0.0000
229 S A 0.0000
230 F A -1.4792
231 E A -2.7711
232 A A 0.0000
233 A A 0.0000
234 E A -3.1518
235 K A -2.8117
236 A A 0.0000
237 K A -1.6215
238 F A -0.6700
239 N A 0.0000
240 L A 0.0000
241 I A 0.3024
242 Q A 0.0000
243 A A 0.0000
244 H A 0.0000
245 I A 0.0000
246 G A 0.0000
247 A A 0.0000
248 Y A -0.4618
249 D A -1.1164
250 A A 0.0000
251 I A 0.0000
252 K A -1.4494
253 E A -1.4381
254 Y A -0.5962
255 S A -1.4972
256 E A -2.3355
257 K A -1.5881
258 S A -0.8820
259 V A 0.0000
260 G A 0.0000
261 V A 0.0000
262 I A 0.0000
263 Y A 0.0000
264 A A -0.0848
265 F A 0.0000
266 A A 0.0183
267 W A 0.0000
268 H A 0.0000
269 D A -0.2409
270 P A -0.9507
271 L A 0.7016
272 A A -1.0485
273 E A -3.2641
274 E A -3.2736
275 Y A -2.7926
276 K A -4.1415
277 D A -4.6064
278 E A -4.2264
279 V A 0.0000
280 E A -4.1688
281 E A -4.0796
282 I A -3.0674
283 R A -2.9014
284 K A -3.8885
285 K A -3.8997
286 D A -2.5495
287 Y A 0.0000
288 E A -2.8008
289 F A 0.0000
290 V A 0.0000
291 T A -1.1870
292 I A -0.3013
293 L A 0.0000
294 H A -1.3774
295 S A -1.1371
296 K A -2.0547
297 G A -1.5965
298 K A -1.2414
299 L A 0.0000
300 D A -0.7152
301 W A 0.0000
302 I A 0.0000
303 G A 0.0000
304 V A 0.0000
305 N A 0.0000
306 Y A 0.0000
307 Y A 0.3127
308 S A 0.0000
309 R A 0.1623
310 L A 0.3852
311 V A 0.0000
312 Y A 0.0000
313 G A 0.0000
314 A A -1.2934
315 K A -2.6677
316 D A -2.9493
317 G A -2.1289
318 H A -1.9626
319 L A -1.1866
320 V A -0.7189
321 P A 0.0389
322 L A 0.1657
323 P A -0.4000
324 G A -0.8025
325 Y A -0.2788
326 G A 0.0000
327 F A 0.8155
328 M A -0.1141
329 S A -1.0468
330 E A -2.4687
331 R A -2.5731
332 G A -1.3549
333 G A -0.7445
334 F A 0.2463
335 A A 0.0000
336 K A -1.7427
337 S A -0.8561
338 G A -0.4665
339 R A -0.4330
340 P A 0.0000
341 A A 0.0000
342 S A 0.0000
343 D A -1.6632
344 F A -0.6375
345 G A 0.0000
346 W A 0.1600
347 E A 0.0000
348 M A 0.0000
349 Y A -0.1314
350 P A -0.7157
351 E A -0.9830
352 G A 0.0000
353 L A 0.0000
354 E A -1.5617
355 N A -0.9979
356 L A 0.0000
357 L A 0.0000
358 K A -1.9952
359 Y A -0.9105
360 L A 0.0000
361 N A -1.8572
362 N A -1.9091
363 A A -1.3430
364 Y A 0.0000
365 E A -2.3868
366 L A -1.0485
367 P A -0.8941
368 M A 0.0000
369 I A 0.0000
370 I A 0.0000
371 T A 0.0000
372 E A -0.1736
373 N A 0.0000
374 G A 0.0000
375 M A 0.0000
376 A A 0.0000
377 D A 0.0000
378 A A -0.2998
379 A A 0.0000
380 D A 0.0000
381 R A -0.3861
382 Y A 0.0000
383 R A 0.0000
384 P A 0.0000
385 H A 0.0000
386 Y A 0.0000
387 L A 0.0000
388 V A 0.0000
389 S A 0.0000
390 H A 0.0000
391 L A 0.0000
392 K A -1.1953
393 A A 0.0000
394 V A 0.0000
395 Y A -1.5001
396 N A -2.5115
397 A A 0.0000
398 M A -2.2599
399 K A -3.1322
400 E A -3.2735
401 G A -2.5565
402 A A 0.0000
403 D A -1.7447
404 V A 0.0000
405 R A -1.7794
406 G A 0.0000
407 Y A 0.0000
408 L A 0.0000
409 H A 0.0000
410 W A 0.0000
411 S A 0.0000
412 L A 0.0000
413 T A 0.0000
414 D A 0.0000
415 N A 0.0000
416 Y A 0.0000
417 E A -0.5920
418 W A 0.0000
419 A A 0.0000
420 Q A -1.0570
421 G A 0.0000
422 F A -1.0005
423 R A -2.0432
424 M A 0.0000
425 R A 0.0000
426 F A 0.0000
427 G A 0.0000
428 L A 0.0000
429 V A 0.0000
430 Y A 0.0000
431 V A 0.0000
432 D A -1.2973
433 F A -1.4378
434 E A -2.3000
435 T A -1.5583
436 K A -1.7702
437 K A -1.9978
438 R A -1.3168
439 Y A -0.9044
440 L A 0.0000
441 R A 0.0000
442 P A 0.0000
443 S A 0.0000
444 A A 0.0000
445 L A 0.0000
446 V A 0.0000
447 F A 0.0000
448 R A -0.9012
449 E A -0.6958
450 I A 0.0000
451 A A 0.0000
452 T A -1.2441
453 Q A -1.4195
454 K A -1.6577
455 E A -1.6181
456 I A -1.2041
457 P A -1.7620
458 E A -2.6198
459 E A -2.7099
460 L A 0.0000
461 A A -1.4226
462 H A -1.0473
463 L A 0.0000
464 A A -1.0388
465 D A -1.7175
466 L A 0.0000
467 K A -1.7981
468 F A -0.4151
469 V A 0.0000
470 T A -0.2708
1 A B -1.8191
2 K B -2.9474
3 F B 0.0000
4 P B -1.9805
5 K B -2.5725
6 N B -1.8857
7 F B 0.0000
8 M B -0.9285
9 F B 0.0000
10 G B 0.0000
11 Y B 0.0000
12 S B 0.0000
13 W B 0.0000
14 S B 0.0000
15 G B -0.0986
16 F B 0.0000
17 Q B 0.0000
18 F B 0.0000
19 E B 0.0000
20 M B 0.0000
21 G B 0.0000
22 L B -0.7651
23 P B -1.0637
24 G B -0.9806
25 S B 0.0000
26 E B -2.4627
27 V B -1.6423
28 E B -1.8093
29 S B 0.0000
30 D B 0.0000
31 W B 0.0000
32 W B -0.3651
33 V B -0.2744
34 W B 0.0000
35 V B 0.0000
36 H B -1.4168
37 D B -1.4235
38 K B -2.0703
39 E B -1.1174
40 N B 0.0000
41 I B -0.5072
42 A B -0.3847
43 S B 0.0000
44 G B -0.6156
45 L B -0.1722
46 V B -0.2877
47 S B -0.5936
48 G B -1.0078
49 D B -1.3205
50 L B -1.0272
51 P B 0.0000
52 E B -2.5812
53 N B -2.1400
54 G B 0.0000
55 P B 0.0000
56 A B 0.0000
57 Y B 0.0000
58 W B -0.5894
59 H B -0.6107
60 L B -0.6033
61 Y B 0.0000
62 K B -2.5792
63 Q B -2.2614
64 D B 0.0000
65 H B 0.0000
66 D B -2.1398
67 I B -1.4440
68 A B 0.0000
69 E B -2.1407
70 K B -2.2576
71 L B 0.0000
72 G B -1.5015
73 M B 0.0000
74 D B -1.2039
75 C B 0.0000
76 I B 0.0000
77 R B 0.0000
78 G B 0.0000
79 G B 0.0000
80 I B 0.0000
81 E B -0.2304
82 W B 0.0000
83 A B 0.0000
84 R B 0.0000
85 I B 0.0000
86 F B 0.0000
87 P B -0.9597
88 K B -1.3070
89 P B -0.6909
90 T B 0.0000
91 F B -0.6620
92 D B -1.8389
93 V B -1.5039
94 K B -2.5826
95 V B -2.1600
96 D B -2.8626
97 V B -1.9108
98 E B -2.8810
99 K B -3.3564
100 D B -3.9678
101 E B -3.8700
102 E B -3.6244
103 G B -2.8912
104 N B -2.2355
105 I B 0.0000
106 I B 0.1475
107 S B -1.2943
108 V B -1.7920
109 D B -3.0456
110 V B 0.0000
111 P B -1.6093
112 E B -1.7538
113 S B -1.7350
114 T B -2.3181
115 I B 0.0000
116 K B -3.5962
117 E B -3.7019
118 L B 0.0000
119 E B -2.7909
120 K B -2.9130
121 I B -1.6088
122 A B 0.0000
123 N B -1.5595
124 M B -1.5828
125 E B -2.3507
126 A B 0.0000
127 L B 0.0000
128 E B -3.0217
129 H B -2.1949
130 Y B 0.0000
131 R B -2.4060
132 K B -2.8086
133 I B 0.0000
134 Y B 0.0000
135 S B -2.5019
136 D B -2.5668
137 W B 0.0000
138 K B -3.4125
139 E B -3.0939
140 R B -2.4830
141 G B -2.1841
142 K B -1.9863
143 T B -1.0899
144 F B 0.0000
145 I B 0.0000
146 L B 0.0000
147 N B 0.0000
148 L B 0.0000
149 Y B 0.0000
150 H B -0.2405
151 W B 0.0000
152 P B 0.0000
153 L B 0.0000
154 P B 0.0000
155 L B 0.4980
156 W B 0.2487
157 I B 0.0000
158 H B 0.0000
159 D B -0.1313
160 P B 0.0000
161 I B -0.0599
162 A B -0.2136
163 V B 0.0000
164 R B 0.0000
165 K B -0.6128
166 L B -0.1428
167 G B 0.0000
168 P B -1.5707
169 D B -2.4942
170 R B -2.4625
171 A B 0.0000
172 P B -0.7913
173 A B 0.0000
174 G B 0.0000
175 W B 0.0000
176 L B 0.0000
177 D B -2.0325
178 E B -2.3919
179 K B -1.7218
180 T B 0.0000
181 V B -0.3874
182 V B -0.3388
183 E B 0.0000
184 F B 0.0000
185 V B 0.0000
186 K B 0.0000
187 F B 0.0000
188 A B 0.0000
189 A B 0.0000
190 F B 0.0000
191 V B 0.0000
192 A B 0.0000
193 Y B 0.0563
194 H B -0.4366
195 L B 0.0000
196 D B -1.6209
197 D B -2.3504
198 L B 0.0000
199 V B 0.0000
200 D B -1.7327
201 M B -0.8715
202 W B 0.0000
203 S B 0.0000
204 T B 0.0000
205 M B 0.0000
206 N B 0.0000
207 E B -0.2763
208 P B 0.0000
209 N B -0.6513
210 V B -0.1060
211 V B -0.1783
212 Y B -0.8550
213 N B -1.4862
214 Q B -0.6608
215 G B 0.0000
216 Y B 0.0000
217 I B -0.5222
218 N B -0.5330
219 L B 0.0000
220 R B -1.1914
221 S B -0.6208
222 G B -0.3002
223 F B 0.2561
224 P B 0.0000
225 P B 0.0000
226 G B 0.0000
227 Y B 0.0311
228 L B 0.0000
229 S B 0.0000
230 F B -1.4129
231 E B -2.5360
232 A B 0.0000
233 A B 0.0000
234 E B -2.6463
235 K B -1.9526
236 A B 0.0000
237 K B -0.8647
238 F B 0.9321
239 N B 0.0000
240 L B 0.0000
241 I B 0.8441
242 Q B 0.4551
243 A B 0.0000
244 H B 0.0000
245 I B 0.0000
246 G B 0.0000
247 A B 0.0000
248 Y B 0.0000
249 D B -1.0969
250 A B 0.0000
251 I B 0.0000
252 K B -2.6897
253 E B -2.8370
254 Y B -1.5226
255 S B 0.0000
256 E B -2.7412
257 K B -1.8087
258 S B -1.1324
259 V B 0.0000
260 G B 0.0000
261 V B 0.0000
262 I B 0.0000
263 Y B 0.0000
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227 Y D 0.0360
228 L D 0.0000
229 S D 0.0000
230 F D -1.3894
231 E D -2.5548
232 A D -1.9333
233 A D 0.0000
234 E D -3.3943
235 K D -3.1107
236 A D 0.0000
237 K D -1.7647
238 F D -0.7826
239 N D 0.0000
240 L D 0.0000
241 I D 0.1620
242 Q D 0.0000
243 A D 0.0000
244 H D 0.0000
245 I D 0.0000
246 G D 0.0000
247 A D 0.0000
248 Y D -0.5189
249 D D -0.7434
250 A D 0.0000
251 I D 0.0000
252 K D -1.4310
253 E D -1.3727
254 Y D -0.8080
255 S D -1.5340
256 E D -2.2793
257 K D -1.7728
258 S D -1.1194
259 V D 0.0000
260 G D 0.0000
261 V D 0.0000
262 I D 0.0000
263 Y D 0.0000
264 A D -0.0833
265 F D 0.0000
266 A D 0.0302
267 W D 0.0000
268 H D 0.0000
269 D D -0.3676
270 P D -1.3800
271 L D -0.0544
272 A D -1.5544
273 E D -3.5523
274 E D -3.4910
275 Y D -2.9964
276 K D -4.2841
277 D D -4.7066
278 E D -4.3449
279 V D 0.0000
280 E D -4.1309
281 E D -4.5600
282 I D -3.4250
283 R D 0.0000
284 K D -4.0495
285 K D -4.1163
286 D D -3.0076
287 Y D 0.0000
288 E D -2.9959
289 F D 0.0000
290 V D 0.0000
291 T D -1.3833
292 I D -0.3698
293 L D 0.0000
294 H D -0.9866
295 S D -0.8160
296 K D -1.0703
297 G D -1.2497
298 K D -1.1184
299 L D 0.0000
300 D D -0.8643
301 W D 0.0000
302 I D 0.0000
303 G D 0.0000
304 V D 0.0000
305 N D 0.0000
306 Y D 0.0000
307 Y D 0.2960
308 S D 0.0000
309 R D 0.0000
310 L D 0.5030
311 V D 0.0000
312 Y D 0.0000
313 G D 0.0000
314 A D -1.7590
315 K D -2.8074
316 D D -3.0745
317 G D -2.4956
318 H D -1.7552
319 L D -1.1287
320 V D 0.0069
321 P D 0.2573
322 L D 0.1842
323 P D -0.4170
324 G D -0.7214
325 Y D -0.2091
326 G D 0.0000
327 F D 0.4502
328 M D -0.0476
329 S D -1.0681
330 E D -2.5520
331 R D -2.5736
332 G D -1.6258
333 G D -0.9498
334 F D -0.0965
335 A D -0.9261
336 K D -1.8009
337 S D -0.8237
338 G D -0.4899
339 R D 0.0000
340 P D 0.0000
341 A D 0.0000
342 S D 0.0000
343 D D -1.3994
344 F D -0.6043
345 G D 0.0000
346 W D 0.1293
347 E D 0.0000
348 M D 0.0000
349 Y D 0.0512
350 P D 0.0000
351 E D -0.9779
352 G D 0.0000
353 L D 0.0000
354 E D -1.7657
355 N D -1.3050
356 L D 0.0000
357 L D 0.0000
358 K D -2.5470
359 Y D -1.4667
360 L D 0.0000
361 N D -2.5304
362 N D -2.1583
363 A D -1.4279
364 Y D 0.0000
365 E D -2.6429
366 L D -1.3335
367 P D -1.4473
368 M D 0.0000
369 I D 0.0000
370 I D 0.0000
371 T D 0.0000
372 E D -0.1753
373 N D 0.0000
374 G D 0.0000
375 M D 0.0000
376 A D 0.0000
377 D D 0.0000
378 A D -0.2786
379 A D -0.2559
380 D D -0.5209
381 R D -0.7937
382 Y D 0.0000
383 R D 0.0000
384 P D 0.0000
385 H D 0.0000
386 Y D 0.0000
387 L D 0.0000
388 V D 0.0000
389 S D 0.0000
390 H D 0.0000
391 L D 0.0000
392 K D -1.6508
393 A D 0.0000
394 V D 0.0000
395 Y D -1.4600
396 N D -2.2763
397 A D 0.0000
398 M D -2.5833
399 K D -3.0158
400 E D -3.4913
401 G D -2.9769
402 A D 0.0000
403 D D -2.8839
404 V D 0.0000
405 R D -1.8980
406 G D 0.0000
407 Y D 0.0000
408 L D 0.0000
409 H D 0.0000
410 W D 0.0000
411 S D 0.0000
412 L D 0.0000
413 T D 0.0000
414 D D 0.0000
415 N D 0.0000
416 Y D 0.0000
417 E D -0.4979
418 W D -0.1081
419 A D -0.2285
420 Q D -0.7944
421 G D 0.0000
422 F D -0.6879
423 R D -1.2755
424 M D 0.0000
425 R D 0.0000
426 F D 0.0000
427 G D 0.0000
428 L D 0.0000
429 V D 0.0000
430 Y D -0.3216
431 V D 0.0000
432 D D -1.3952
433 F D 0.0000
434 E D -2.3065
435 T D -1.5169
436 K D -1.4015
437 K D -1.9836
438 R D -1.2810
439 Y D -1.1990
440 L D -0.3839
441 R D 0.0000
442 P D 0.0000
443 S D 0.0000
444 A D 0.0000
445 L D 0.0000
446 V D 0.0000
447 F D 0.0000
448 R D -1.2198
449 E D -0.9638
450 I D 0.0000
451 A D 0.0000
452 T D -1.4770
453 Q D -1.7566
454 K D -1.8431
455 E D -1.6598
456 I D -1.1139
457 P D -1.4891
458 E D -2.1603
459 E D -1.7433
460 L D 0.0000
461 A D -1.3964
462 H D 0.0000
463 L D 0.0000
464 A D -1.5006
465 D D -2.1868
466 L D 0.0000
467 K D -1.9156
468 F D -0.5403
469 V D 0.0000
470 T D -0.3364
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Calculations for various pH values

This page contains details and comparisons for all models calculated at different pH points.
Please find suggestions on interpreting the results below. More details can be found in the Tutorial.
The input structure is globular. Max score is recommended for pH analysis.

pH
Average A4D Score
Max A4D Score
4.0 -0.6116 2.7528 View CSV PDB
4.5 -0.6886 2.6674 View CSV PDB
5.0 -0.7859 2.5683 View CSV PDB
5.5 -0.8851 2.4848 View CSV PDB
6.0 -0.9654 2.4541 View CSV PDB
6.5 -1.0106 2.5049 View CSV PDB
7.0 -1.0182 2.6284 View CSV PDB
7.5 -0.9988 2.792 View CSV PDB
8.0 -0.9646 2.9717 View CSV PDB
8.5 -0.921 3.1564 View CSV PDB
9.0 -0.8687 3.3411 View CSV PDB