Chain sequence(s) |
A: MASQLSAMTSVPQFHGLRTYSSPRSMATLPSLRRRRSQGIRCDYIGSSTNLIMVTTTTLMLFAGRFGLAPSANRKATAGLKLEARESGLQTGDPAGFTLADTLACGAVGHIMGVGIVLGLKNTGVLDQIIG
input PDB |
Selected Chain(s) | A |
Distance of aggregation | 10 Å |
FoldX usage | No |
pH calculations | No |
alphaCutter usage | No |
Dynamic mode | No |
Automated mutations | No |
Downloads | Download all the data |
Simulation log |
[INFO] Logger: Verbosity set to: 2 - [INFO] (00:00:00) [WARNING] runJob: Working directory already exists (possibly overwriting previous results -ow to prevent this behavior) (00:00:00) [INFO] runJob: Starting aggrescan3d job on: input.pdb with A chain(s) selected (00:00:00) [INFO] runJob: Creating pdb object from: input.pdb (00:00:00) [INFO] runJob: FoldX not utilized. Treating input pdb file as it was already optimized. (00:00:00) [INFO] Analysis: Starting Aggrescan4D on folded.pdb (00:00:01) [INFO] Main: Simulation completed successfully. (00:00:01) |
The table below lists A4D score for protein residues. Residues with A4D score > 0.0000 are marked by yellow rows.
residue index | residue name | chain | Aggrescan4D score | mutation |
---|---|---|---|---|
1 | M | A | 0.9048 | |
2 | A | A | 0.3268 | |
3 | S | A | -0.1637 | |
4 | Q | A | -0.4644 | |
5 | L | A | 0.9387 | |
6 | S | A | 0.5556 | |
7 | A | A | 0.6278 | |
8 | M | A | 1.2930 | |
9 | T | A | 0.7523 | |
10 | S | A | 0.6848 | |
11 | V | A | 1.5833 | |
12 | P | A | 0.3483 | |
13 | Q | A | -0.2815 | |
14 | F | A | 1.0774 | |
15 | H | A | -0.5042 | |
16 | G | A | -0.1957 | |
17 | L | A | 0.5258 | |
18 | R | A | -1.0559 | |
19 | T | A | -0.0242 | |
20 | Y | A | 0.7918 | |
21 | S | A | -0.1634 | |
22 | S | A | -0.7436 | |
23 | P | A | -1.0440 | |
24 | R | A | -1.8742 | |
25 | S | A | -0.6856 | |
26 | M | A | 0.6439 | |
27 | A | A | 0.6646 | |
28 | T | A | 0.8827 | |
29 | L | A | 1.7249 | |
30 | P | A | 0.5090 | |
31 | S | A | -0.0432 | |
32 | L | A | -0.1655 | |
33 | R | A | -2.9214 | |
34 | R | A | -3.7401 | |
35 | R | A | -4.2035 | |
36 | R | A | -4.0996 | |
37 | S | A | -2.4049 | |
38 | Q | A | -2.2024 | |
39 | G | A | -0.9247 | |
40 | I | A | 0.6488 | |
41 | R | A | -1.1194 | |
42 | C | A | 0.2776 | |
43 | D | A | -0.8761 | |
44 | Y | A | 1.2049 | |
45 | I | A | 2.1796 | |
46 | G | A | 0.8094 | |
47 | S | A | 0.6814 | |
48 | S | A | 1.5022 | |
49 | T | A | 1.3975 | |
50 | N | A | 1.5239 | |
51 | L | A | 2.4500 | |
52 | I | A | 1.7985 | |
53 | M | A | 2.1481 | |
54 | V | A | 2.4354 | |
55 | T | A | 1.8086 | |
56 | T | A | 2.3052 | |
57 | T | A | 2.0684 | |
58 | T | A | 1.9158 | |
59 | L | A | 2.5157 | |
60 | M | A | 2.3184 | |
61 | L | A | 2.1060 | |
62 | F | A | 3.0529 | |
63 | A | A | 2.3093 | |
64 | G | A | 0.0000 | |
65 | R | A | 0.8319 | |
66 | F | A | 2.4035 | |
67 | G | A | 1.4674 | |
68 | L | A | 2.1402 | |
69 | A | A | 0.8968 | |
70 | P | A | -0.9271 | |
71 | S | A | -0.7202 | |
72 | A | A | -1.0679 | |
73 | N | A | -2.5403 | |
74 | R | A | -2.9720 | |
75 | K | A | -3.0806 | |
76 | A | A | -1.3705 | |
77 | T | A | -1.0273 | |
78 | A | A | -0.1900 | |
79 | G | A | -0.1693 | |
80 | L | A | 0.2278 | |
81 | K | A | -1.6855 | |
82 | L | A | -1.7377 | |
83 | E | A | -3.3540 | |
84 | A | A | -2.9742 | |
85 | R | A | -3.8947 | |
86 | E | A | -3.1149 | |
87 | S | A | -1.5810 | |
88 | G | A | -0.9700 | |
89 | L | A | 0.4454 | |
90 | Q | A | -0.9301 | |
91 | T | A | -0.3373 | |
92 | G | A | -0.8400 | |
93 | D | A | -0.8661 | |
94 | P | A | -0.6950 | |
95 | A | A | -0.3033 | |
96 | G | A | -0.3112 | |
97 | F | A | 0.2972 | |
98 | T | A | 0.0000 | |
99 | L | A | 2.1385 | |
100 | A | A | 1.5452 | |
101 | D | A | 0.0000 | |
102 | T | A | 1.6213 | |
103 | L | A | 2.1969 | |
104 | A | A | 1.2823 | |
105 | C | A | 0.0000 | |
106 | G | A | 1.6772 | |
107 | A | A | 1.4135 | |
108 | V | A | 2.3733 | |
109 | G | A | 0.0000 | |
110 | H | A | 1.4995 | |
111 | I | A | 2.9406 | |
112 | M | A | 2.6622 | |
113 | G | A | 0.0000 | |
114 | V | A | 2.6687 | |
115 | G | A | 1.7203 | |
116 | I | A | 1.7283 | |
117 | V | A | 1.4190 | |
118 | L | A | 1.2336 | |
119 | G | A | 0.1380 | |
120 | L | A | -0.2230 | |
121 | K | A | -1.8265 | |
122 | N | A | -1.5711 | |
123 | T | A | -1.2336 | |
124 | G | A | -1.5273 | |
125 | V | A | -0.3457 | |
126 | L | A | 0.0000 | |
127 | D | A | -1.3002 | |
128 | Q | A | -0.4247 | |
129 | I | A | 1.8542 | |
130 | I | A | 1.8099 | |
131 | G | A | 0.1993 |