Project name: mi2699_3APG_60C_conf2

Status: done

Started: 2026-05-15 14:47:58
Chain sequence(s) A: AKFPKNFMFGYSWSGFQFEMGLPGSEVESDWWVWVHDKENIASGLVSGDLPENGPAYWHLYKQDHDIAEKLGMDCIRGGIEWARIFPKPTFDVKVDVEKDEEGNIISVDVPESTIKELEKIANMEALEHYRKIYSDWKERGKTFILNLYHWPLPLWIHDPIAVRKLGPDRAPAGWLDEKTVVEFVKFAAFVAYHLDDLVDMWSTMNEPNVVYNQGYINLRSGFPPGYLSFEAAEKAKFNLIQAHIGAYDAIKEYSEKSVGVIYAFAWHDPLAEEYKDEVEEIRKKDYEFVTILHSKGKLDWIGVNYYSRLVYGAKDGHLVPLPGYGFMSERGGFAKSGRPASDFGWEMYPEGLENLLKYLNNAYELPMIITENGMADAADRYRPHYLVSHLKAVYNAMKEGADVRGYLHWSLTDNYEWAQGFRMRFGLVYVDFETKKRYLRPSALVFREIATQKEIPEELAHLADLKFVTR
C: AKFPKNFMFGYSWSGFQFEMGLPGSEVESDWWVWVHDKENIASGLVSGDLPENGPAYWHLYKQDHDIAEKLGMDCIRGGIEWARIFPKPTFDVKVDVEKDEEGNIISVDVPESTIKELEKIANMEALEHYRKIYSDWKERGKTFILNLYHWPLPLWIHDPIAVRKLGPDRAPAGWLDEKTVVEFVKFAAFVAYHLDDLVDMWSTMNEPNVVYNQGYINLRSGFPPGYLSFEAAEKAKFNLIQAHIGAYDAIKEYSEKSVGVIYAFAWHDPLAEEYKDEVEEIRKKDYEFVTILHSKGKLDWIGVNYYSRLVYGAKDGHLVPLPGYGFMSERGGFAKSGRPASDFGWEMYPEGLENLLKYLNNAYELPMIITENGMADAADRYRPHYLVSHLKAVYNAMKEGADVRGYLHWSLTDNYEWAQGFRMRFGLVYVDFETKKRYLRPSALVFREIATQKEIPEELAHLADLKFVTR
B: AKFPKNFMFGYSWSGFQFEMGLPGSEVESDWWVWVHDKENIASGLVSGDLPENGPAYWHLYKQDHDIAEKLGMDCIRGGIEWARIFPKPTFDVKVDVEKDEEGNIISVDVPESTIKELEKIANMEALEHYRKIYSDWKERGKTFILNLYHWPLPLWIHDPIAVRKLGPDRAPAGWLDEKTVVEFVKFAAFVAYHLDDLVDMWSTMNEPNVVYNQGYINLRSGFPPGYLSFEAAEKAKFNLIQAHIGAYDAIKEYSEKSVGVIYAFAWHDPLAEEYKDEVEEIRKKDYEFVTILHSKGKLDWIGVNYYSRLVYGAKDGHLVPLPGYGFMSERGGFAKSGRPASDFGWEMYPEGLENLLKYLNNAYELPMIITENGMADAADRYRPHYLVSHLKAVYNAMKEGADVRGYLHWSLTDNYEWAQGFRMRFGLVYVDFETKKRYLRPSALVFREIATQKEIPEELAHLADLKFVTR
D: AKFPKNFMFGYSWSGFQFEMGLPGSEVESDWWVWVHDKENIASGLVSGDLPENGPAYWHLYKQDHDIAEKLGMDCIRGGIEWARIFPKPTFDVKVDVEKDEEGNIISVDVPESTIKELEKIANMEALEHYRKIYSDWKERGKTFILNLYHWPLPLWIHDPIAVRKLGPDRAPAGWLDEKTVVEFVKFAAFVAYHLDDLVDMWSTMNEPNVVYNQGYINLRSGFPPGYLSFEAAEKAKFNLIQAHIGAYDAIKEYSEKSVGVIYAFAWHDPLAEEYKDEVEEIRKKDYEFVTILHSKGKLDWIGVNYYSRLVYGAKDGHLVPLPGYGFMSERGGFAKSGRPASDFGWEMYPEGLENLLKYLNNAYELPMIITENGMADAADRYRPHYLVSHLKAVYNAMKEGADVRGYLHWSLTDNYEWAQGFRMRFGLVYVDFETKKRYLRPSALVFREIATQKEIPEELAHLADLKFVTR
input PDB
Selected Chain(s) A,C,B,D
Distance of aggregation 10 Å
FoldX usage Yes
pH calculations Yes
alphaCutter usage No
Dynamic mode No
Automated mutations No
Downloads Download all the data
Simulation log
[INFO]       Logger:   Verbosity set to: 2 - [INFO]                                                (00:00:01)
[WARNING]    runJob:   Working directory already exists (possibly overwriting previous results -ow 
                       to prevent this behavior)                                                   (00:00:01)
[INFO]       runJob:   Starting aggrescan3d job on: input.pdb with all chain(s) selected           (00:00:01)
[INFO]       runJob:   Creating pdb object from: input.pdb                                         (00:00:01)
[INFO]       PDB-Info: The input structure is globular. Max score is recommended for pH analysis.  (00:00:11)
[INFO]       FoldX:    Starting FoldX energy minimization                                          (00:00:12)
[INFO]       Analysis: Starting Aggrescan4D on folded.pdb                                          (00:53:05)
[INFO]       agg3D:    Running pKa-ANI on                                                          
                       /STORAGE/DATA/lcbio/aggreskan/1b6b45bcfcfc9b3/tmp/folded.pdb                (00:53:05)
[INFO]       Main:     Simulation completed successfully.                                          (01:39:13)
Show buried residues

Minimal score value
-4.8756
Maximal score value
1.2721
Average score
-0.7773
Total score value
-1464.3726

The table below lists A4D score for protein residues. Residues with A4D score > 0.0000 are marked by yellow rows.

residue index residue name chain Aggrescan4D score mutation
1 A A -1.2169
2 K A -2.3864
3 F A 0.0000
4 P A -2.0648
5 K A -2.8854
6 N A -2.4990
7 F A 0.0000
8 M A 0.0000
9 F A 0.0000
10 G A 0.0000
11 Y A 0.0000
12 S A 0.0000
13 W A 0.0000
14 S A 0.0000
15 G A 0.0000
16 F A 0.0000
17 Q A 0.0000
18 F A 0.0000
19 E A 0.0000
20 M A 0.0000
21 G A 0.0000
22 L A -0.7303
23 P A -0.8840
24 G A -1.0151
25 S A 0.0000
26 E A -1.8501
27 V A -1.3160
28 E A -1.7589
29 S A 0.0000
30 D A 0.0000
31 W A 0.0000
32 W A -0.5223
33 V A -0.2199
34 W A 0.0000
35 V A 0.0000
36 H A -0.6885
37 D A -0.8696
38 K A -1.4612
39 E A -0.7769
40 N A 0.0000
41 I A 0.5415
42 A A 0.1641
43 S A 0.0000
44 G A -0.1272
45 L A -0.0556
46 V A 0.0000
47 S A -0.3961
48 G A -0.3931
49 D A -1.0727
50 L A -0.6693
51 P A 0.0000
52 E A -1.6671
53 N A -1.8481
54 G A 0.0000
55 P A 0.0000
56 A A 0.0000
57 Y A 0.0000
58 W A 0.0000
59 H A -0.7510
60 L A -0.6230
61 Y A 0.0000
62 K A -2.1773
63 Q A -1.9182
64 D A 0.0000
65 H A 0.0000
66 D A -2.3804
67 I A 0.0000
68 A A 0.0000
69 E A -1.7875
70 K A -1.9047
71 L A 0.0000
72 G A -1.3624
73 M A 0.0000
74 D A -1.1121
75 C A 0.0000
76 I A 0.0000
77 R A 0.0000
78 G A 0.0000
79 G A 0.0000
80 I A 0.0000
81 E A 0.0000
82 W A 0.0000
83 A A 0.0000
84 R A 0.0000
85 I A 0.0000
86 F A 0.0000
87 P A -1.1715
88 K A -1.5547
89 P A -0.8227
90 T A 0.0000
91 F A -0.7176
92 D A -1.7577
93 V A -1.3652
94 K A -2.1933
95 V A 0.0000
96 D A -3.2937
97 V A -2.0735
98 E A -2.5390
99 K A -2.6915
100 D A -3.1551
101 E A -3.5702
102 E A -3.4208
103 G A -2.7753
104 N A -1.6256
105 I A 0.0000
106 I A 0.5761
107 S A -0.9450
108 V A 0.0000
109 D A -3.0789
110 V A 0.0000
111 P A -2.2236
112 E A -2.2556
113 S A -2.0899
114 T A -2.1896
115 I A 0.0000
116 K A -3.4818
117 E A -3.4883
118 L A 0.0000
119 E A -2.4264
120 K A -2.6350
121 I A -1.6865
122 A A -1.5142
123 N A -1.5625
124 M A -1.6696
125 E A -2.5849
126 A A 0.0000
127 L A 0.0000
128 E A -3.2497
129 H A -2.4366
130 Y A 0.0000
131 R A -2.5711
132 K A -2.8024
133 I A 0.0000
134 Y A 0.0000
135 S A -2.2085
136 D A 0.0000
137 W A 0.0000
138 K A -2.5308
139 E A -2.8175
140 R A -2.1636
141 G A -1.8691
142 K A -1.4106
143 T A -0.7876
144 F A 0.0000
145 I A 0.0000
146 L A 0.0000
147 N A 0.0000
148 L A 0.0000
149 Y A 0.0000
150 H A 0.0000
151 W A 0.1630
152 P A 0.0000
153 L A 0.0000
154 P A 0.0000
155 L A 0.0143
156 W A 0.0890
157 I A 0.0000
158 H A 0.0000
159 D A -0.0320
160 P A 0.0000
161 I A 0.0843
162 A A 0.0000
163 V A 0.0000
164 R A -0.6061
165 K A -1.2515
166 L A -0.5955
167 G A 0.0000
168 P A -1.6390
169 D A -2.5179
170 R A -2.6305
171 A A -1.5125
172 P A -0.9929
173 A A 0.0000
174 G A 0.0000
175 W A 0.0000
176 L A 0.0000
177 D A -2.2843
178 E A -3.0261
179 K A -2.3737
180 T A 0.0000
181 V A 0.0000
182 V A -1.0489
183 E A 0.0000
184 F A 0.0000
185 V A 0.0000
186 K A 0.0000
187 F A 0.0000
188 A A 0.0000
189 A A 0.0000
190 F A 0.0000
191 V A 0.0000
192 A A 0.0000
193 Y A -0.6972
194 H A -0.8553
195 L A 0.0000
196 D A -1.5104
197 D A -2.1701
198 L A 0.0000
199 V A 0.0000
200 D A -0.9741
201 M A -0.4075
202 W A 0.0000
203 S A 0.0000
204 T A 0.0000
205 M A 0.0000
206 N A 0.0000
207 E A -0.0541
208 P A 0.0000
209 N A 0.0000
210 V A 0.0838
211 V A 0.0000
212 Y A -0.4974
213 N A -0.6075
214 Q A -0.5386
215 G A 0.0000
216 Y A 0.0000
217 I A -0.2882
218 N A -0.3304
219 L A 0.0000
220 R A -0.9442
221 S A -0.4012
222 G A 0.0000
223 F A 0.0564
224 P A 0.0473
225 P A 0.0000
226 G A 0.0000
227 Y A -0.0097
228 L A 0.0000
229 S A 0.0000
230 F A -0.8102
231 E A -2.2054
232 A A 0.0000
233 A A 0.0000
234 E A -2.6766
235 K A -2.4822
236 A A 0.0000
237 K A -1.1649
238 F A -0.9016
239 N A 0.0000
240 L A 0.0000
241 I A 0.0000
242 Q A 0.0000
243 A A 0.0000
244 H A 0.0000
245 I A 0.0000
246 G A 0.0000
247 A A 0.0000
248 Y A -0.7030
249 D A -1.4253
250 A A 0.0000
251 I A 0.0000
252 K A -1.9057
253 E A -2.2928
254 Y A -1.2471
255 S A 0.0000
256 E A -2.4130
257 K A -1.5498
258 S A -0.9306
259 V A 0.0000
260 G A 0.0000
261 V A 0.0000
262 I A 0.0000
263 Y A 0.0000
264 A A -0.0301
265 F A 0.0000
266 A A -0.0216
267 W A 0.0000
268 H A 0.0000
269 D A -0.5210
270 P A -1.2749
271 L A 0.5854
272 A A -1.0202
273 E A -3.3903
274 E A -3.4540
275 Y A -3.0898
276 K A -4.4748
277 D A -4.5321
278 E A -4.4057
279 V A 0.0000
280 E A -3.7174
281 E A -4.0959
282 I A -2.8158
283 R A 0.0000
284 K A -3.7623
285 K A -3.5746
286 D A -2.4563
287 Y A 0.0000
288 E A -2.6344
289 F A 0.0000
290 V A 0.0000
291 T A -1.0663
292 I A -0.2136
293 L A 0.0000
294 H A -1.0894
295 S A -0.8639
296 K A -1.3459
297 G A -1.2909
298 K A -1.1174
299 L A 0.0000
300 D A -0.6958
301 W A 0.0000
302 I A 0.0000
303 G A 0.0000
304 V A 0.0000
305 N A 0.0000
306 Y A 0.0000
307 Y A 0.2834
308 S A 0.0000
309 R A 0.0530
310 L A 0.6676
311 V A 0.0000
312 Y A 0.0000
313 G A 0.1307
314 A A -1.1020
315 K A -2.6040
316 D A -2.8317
317 G A -2.0744
318 H A -1.7111
319 L A -0.2773
320 V A 1.1856
321 P A 1.2721
322 L A 1.0800
323 P A -0.0960
324 G A -0.6490
325 Y A -0.0687
326 G A 0.0000
327 F A 0.6310
328 M A 0.1818
329 S A -1.0175
330 E A -2.5484
331 R A -2.5900
332 G A -1.5215
333 G A -1.2922
334 F A -0.7980
335 A A 0.0000
336 K A -2.0582
337 S A -0.9011
338 G A -1.1383
339 R A -0.8200
340 P A 0.0000
341 A A 0.0000
342 S A 0.0000
343 D A -1.4287
344 F A -0.4188
345 G A 0.0000
346 W A 0.1409
347 E A 0.0000
348 M A 0.0000
349 Y A -0.0549
350 P A 0.0000
351 E A -0.9918
352 G A 0.0000
353 L A 0.0000
354 E A -1.1022
355 N A -1.1134
356 L A 0.0000
357 L A 0.0000
358 K A -1.9977
359 Y A -0.9100
360 L A 0.0000
361 N A -2.0982
362 N A -1.9450
363 A A -1.0788
364 Y A 0.0000
365 E A -2.4129
366 L A -1.3169
367 P A -1.1878
368 M A 0.0000
369 I A 0.0000
370 I A 0.0000
371 T A 0.0000
372 E A -0.1430
373 N A 0.0000
374 G A 0.0000
375 M A 0.0000
376 A A 0.0000
377 D A -0.5223
378 A A -0.3539
379 A A -0.0371
380 D A 0.0000
381 R A -0.3439
382 Y A 0.0000
383 R A 0.0000
384 P A 0.0000
385 H A 0.0000
386 Y A 0.0000
387 L A 0.0000
388 V A 0.0000
389 S A 0.0000
390 H A 0.0000
391 L A 0.0000
392 K A -0.7845
393 A A 0.0000
394 V A 0.0000
395 Y A -0.8440
396 N A -1.5491
397 A A 0.0000
398 M A -1.6762
399 K A -2.7931
400 E A -3.0572
401 G A -2.5045
402 A A 0.0000
403 D A -2.2909
404 V A 0.0000
405 R A -1.8551
406 G A 0.0000
407 Y A 0.0000
408 L A 0.0000
409 H A 0.0000
410 W A 0.0000
411 S A 0.0000
412 L A 0.0000
413 T A 0.0000
414 D A 0.0000
415 N A 0.0000
416 Y A 0.0000
417 E A -0.5288
418 W A 0.0000
419 A A -0.4174
420 Q A -0.8106
421 G A 0.0000
422 F A -1.0049
423 R A -1.9596
424 M A 0.0000
425 R A -0.6486
426 F A 0.0000
427 G A 0.0000
428 L A 0.0000
429 V A 0.0000
430 Y A 0.0000
431 V A 0.0000
432 D A -1.6459
433 F A 0.0000
434 E A -2.5090
435 T A -1.6644
436 K A -1.7884
437 K A -2.5088
438 R A 0.0000
439 Y A -1.2001
440 L A 0.0000
441 R A 0.0000
442 P A 0.0000
443 S A 0.0000
444 A A 0.0000
445 L A -0.3415
446 V A 0.0000
447 F A 0.0000
448 R A -1.5898
449 E A -0.9968
450 I A 0.0000
451 A A 0.0000
452 T A -1.3308
453 Q A -1.5352
454 K A -1.9357
455 E A -1.8978
456 I A 0.0000
457 P A 0.0000
458 E A -2.3391
459 E A -1.5434
460 L A 0.0000
461 A A -1.2900
462 H A -1.4674
463 L A -0.7880
464 A A -1.0689
465 D A -1.7513
466 L A 0.0000
467 K A -1.7510
468 F A -0.4489
469 V A 0.0000
470 T A -0.8981
471 R A -1.3829
1 A B -1.3139
2 K B -2.5141
3 F B 0.0000
4 P B -2.3908
5 K B -2.8518
6 N B -2.4768
7 F B 0.0000
8 M B -1.0760
9 F B 0.0000
10 G B 0.0000
11 Y B 0.0000
12 S B 0.0000
13 W B 0.0000
14 S B -0.0234
15 G B 0.0000
16 F B 0.0000
17 Q B 0.0000
18 F B 0.0000
19 E B 0.0000
20 M B 0.0000
21 G B 0.0000
22 L B -0.2596
23 P B -0.7770
24 G B -1.1284
25 S B 0.0000
26 E B -2.2985
27 V B -1.5825
28 E B -1.8960
29 S B 0.0000
30 D B 0.0000
31 W B 0.0000
32 W B -0.4204
33 V B 0.0057
34 W B 0.0000
35 V B 0.0000
36 H B -0.7917
37 D B -1.1056
38 K B -1.7094
39 E B -0.7968
40 N B 0.0000
41 I B 0.0403
42 A B -0.0852
43 S B 0.0000
44 G B -0.2948
45 L B 0.0000
46 V B 0.0000
47 S B -0.5126
48 G B -0.5399
49 D B -0.4269
50 L B 0.5903
51 P B 0.0000
52 E B -0.5645
53 N B -0.4737
54 G B 0.0000
55 P B 0.0000
56 A B 0.0000
57 Y B 0.0000
58 W B 0.0000
59 H B -0.6856
60 L B -0.4188
61 Y B 0.0000
62 K B -2.0554
63 Q B -1.9812
64 D B 0.0000
65 H B 0.0000
66 D B -2.5837
67 I B -1.4819
68 A B 0.0000
69 E B -2.8372
70 K B -2.1726
71 L B 0.0000
72 G B -1.6831
73 M B 0.0000
74 D B -2.0968
75 C B 0.0000
76 I B 0.0000
77 R B 0.0000
78 G B 0.0000
79 G B 0.0000
80 I B 0.0000
81 E B 0.0000
82 W B 0.0000
83 A B 0.0000
84 R B 0.0000
85 I B 0.0000
86 F B 0.0000
87 P B -1.3509
88 K B -1.7241
89 P B -1.0010
90 T B 0.0000
91 F B -0.8306
92 D B -1.9577
93 V B 0.0000
94 K B -2.3511
95 V B -1.9679
96 D B -2.9599
97 V B -1.8382
98 E B -2.4487
99 K B -2.5645
100 D B -3.0041
101 E B -3.4567
102 E B -3.3023
103 G B -2.4882
104 N B -1.6336
105 I B 0.0000
106 I B 0.8688
107 S B -0.5309
108 V B -1.6428
109 D B -2.8255
110 V B 0.0000
111 P B -2.1601
112 E B -2.3997
113 S B -2.2756
114 T B 0.0000
115 I B 0.0000
116 K B -3.4087
117 E B -3.2434
118 L B 0.0000
119 E B -2.9097
120 K B -2.8283
121 I B -1.8041
122 A B -1.6833
123 N B -1.5963
124 M B -1.5950
125 E B -2.4682
126 A B 0.0000
127 L B 0.0000
128 E B -3.0551
129 H B -2.3478
130 Y B 0.0000
131 R B -2.3058
132 K B -2.7350
133 I B 0.0000
134 Y B 0.0000
135 S B -2.1850
136 D B 0.0000
137 W B 0.0000
138 K B -3.1979
139 E B -3.0577
140 R B -2.7682
141 G B -2.3195
142 K B -2.3412
143 T B -1.3053
144 F B 0.0000
145 I B 0.0000
146 L B 0.0000
147 N B 0.0000
148 L B 0.0000
149 Y B 0.0000
150 H B 0.0000
151 W B 0.1971
152 P B 0.0000
153 L B 0.0000
154 P B 0.0000
155 L B -0.3944
156 W B -0.3553
157 I B 0.0000
158 H B 0.0000
159 D B -0.1263
160 P B 0.0000
161 I B 0.1102
162 A B -0.5399
163 V B 0.0000
164 R B 0.0000
165 K B -0.6925
166 L B -0.6337
167 G B -0.9701
168 P B -1.5261
169 D B -2.2707
170 R B -2.0805
171 A B -1.2004
172 P B -0.7662
173 A B -1.0727
174 G B 0.0000
175 W B 0.0000
176 L B -1.3252
177 D B -2.0949
178 E B -2.3836
179 K B -1.9854
180 T B 0.0000
181 V B 0.0000
182 V B -0.9425
183 E B 0.0000
184 F B 0.0000
185 V B 0.0000
186 K B 0.0000
187 F B 0.0000
188 A B 0.0000
189 A B 0.0000
190 F B 0.0000
191 V B 0.0000
192 A B 0.0000
193 Y B -0.0598
194 H B -0.4537
195 L B 0.0000
196 D B -1.5266
197 D B -2.1731
198 L B 0.0000
199 V B 0.0000
200 D B -1.8177
201 M B -0.6170
202 W B 0.0000
203 S B 0.0000
204 T B 0.0000
205 M B 0.0000
206 N B -0.1550
207 E B -0.1338
208 P B 0.0000
209 N B -0.4675
210 V B 0.0148
211 V B 0.1236
212 Y B -0.4626
213 N B -0.5073
214 Q B -0.5909
215 G B 0.0000
216 Y B 0.0000
217 I B -0.3649
218 N B -0.9700
219 L B 0.0000
220 R B -2.0266
221 S B -1.1180
222 G B 0.0000
223 F B -0.1712
224 P B 0.1685
225 P B 0.0000
226 G B 0.0000
227 Y B -0.1797
228 L B 0.0000
229 S B 0.0000
230 F B -0.7654
231 E B -2.1105
232 A B 0.0000
233 A B -1.3215
234 E B -2.4607
235 K B -1.9578
236 A B 0.0000
237 K B -0.9579
238 F B -0.6562
239 N B 0.0000
240 L B 0.0000
241 I B 0.0000
242 Q B 0.0000
243 A B 0.0000
244 H B 0.0000
245 I B 0.1003
246 G B 0.0000
247 A B 0.0000
248 Y B -0.6094
249 D B -1.4912
250 A B 0.0000
251 I B 0.0000
252 K B -2.3356
253 E B -2.6342
254 Y B -1.3053
255 S B -1.8235
256 E B -2.6630
257 K B -1.7404
258 S B -1.0224
259 V B 0.0000
260 G B 0.0000
261 V B 0.0000
262 I B 0.0000
263 Y B 0.0000
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227 Y D -0.3641
228 L D 0.0000
229 S D -0.8558
230 F D -0.9828
231 E D -2.2611
232 A D -1.6097
233 A D 0.0000
234 E D -2.6105
235 K D -2.2909
236 A D 0.0000
237 K D -1.4151
238 F D -1.1688
239 N D 0.0000
240 L D 0.0000
241 I D 0.0000
242 Q D 0.0000
243 A D 0.0000
244 H D 0.0000
245 I D 0.0000
246 G D 0.0000
247 A D 0.0000
248 Y D -0.6419
249 D D -1.4470
250 A D 0.0000
251 I D 0.0000
252 K D -2.0407
253 E D -2.4912
254 Y D -1.0914
255 S D 0.0000
256 E D -2.4876
257 K D -1.5704
258 S D -0.8665
259 V D 0.0000
260 G D 0.0000
261 V D 0.0000
262 I D 0.0000
263 Y D 0.0000
264 A D -0.1249
265 F D 0.0000
266 A D 0.0402
267 W D -0.1650
268 H D 0.0000
269 D D -0.0911
270 P D -0.8538
271 L D 0.7544
272 A D -0.9852
273 E D -2.9926
274 E D -3.3432
275 Y D -2.7656
276 K D -3.9058
277 D D -4.3588
278 E D -3.7380
279 V D 0.0000
280 E D -3.4930
281 E D -3.9798
282 I D -2.6141
283 R D -2.5594
284 K D -2.9732
285 K D -3.3045
286 D D -2.3419
287 Y D 0.0000
288 E D -2.0948
289 F D 0.0000
290 V D 0.0000
291 T D -1.0564
292 I D -0.5843
293 L D 0.0000
294 H D -1.4568
295 S D -1.1804
296 K D -1.9468
297 G D -1.5751
298 K D -1.4264
299 L D 0.0000
300 D D -0.7490
301 W D 0.0000
302 I D 0.0000
303 G D 0.0000
304 V D 0.0000
305 N D 0.0000
306 Y D 0.0000
307 Y D 0.2953
308 S D 0.0000
309 R D 0.2175
310 L D 0.6067
311 V D 0.0000
312 Y D 0.0000
313 G D 0.1142
314 A D -0.8654
315 K D -1.8197
316 D D -2.6752
317 G D -1.8915
318 H D -0.9886
319 L D 0.1085
320 V D 1.2429
321 P D 0.9091
322 L D 1.0870
323 P D 0.0274
324 G D 0.0000
325 Y D -0.0976
326 G D 0.0000
327 F D 0.7210
328 M D 0.4179
329 S D 0.0000
330 E D -2.7688
331 R D -2.8456
332 G D -1.9589
333 G D -1.6328
334 F D -1.2084
335 A D 0.0000
336 K D -2.3115
337 S D -1.1452
338 G D -1.3662
339 R D -1.0887
340 P D 0.0000
341 A D 0.0000
342 S D 0.0000
343 D D -1.9297
344 F D -0.9629
345 G D 0.0000
346 W D 0.0332
347 E D 0.0000
348 M D 0.0000
349 Y D -0.0380
350 P D 0.0000
351 E D -1.1161
352 G D 0.0000
353 L D 0.0000
354 E D -1.1570
355 N D -1.1211
356 L D 0.0000
357 L D 0.0000
358 K D -1.8523
359 Y D -0.7461
360 L D 0.0000
361 N D -1.7449
362 N D -1.9151
363 A D -1.1233
364 Y D 0.0000
365 E D -2.3836
366 L D -1.1892
367 P D -0.8850
368 M D 0.0000
369 I D 0.0000
370 I D 0.0000
371 T D 0.0000
372 E D -0.1368
373 N D 0.0000
374 G D 0.0000
375 M D 0.0000
376 A D 0.0000
377 D D -0.4212
378 A D -0.7338
379 A D -0.1274
380 D D 0.0000
381 R D -0.4738
382 Y D 0.0000
383 R D 0.0000
384 P D 0.0000
385 H D 0.0000
386 Y D 0.0000
387 L D -0.0053
388 V D 0.0000
389 S D 0.0000
390 H D 0.0000
391 L D 0.0000
392 K D -1.2253
393 A D 0.0000
394 V D 0.0000
395 Y D -1.1207
396 N D -1.7425
397 A D 0.0000
398 M D -1.9982
399 K D -2.8284
400 E D -3.1056
401 G D -2.3302
402 A D 0.0000
403 D D -1.9943
404 V D 0.0000
405 R D -1.4140
406 G D 0.0000
407 Y D 0.0000
408 L D 0.0000
409 H D 0.0000
410 W D 0.0928
411 S D 0.0000
412 L D 0.0000
413 T D 0.0000
414 D D 0.0000
415 N D 0.0000
416 Y D 0.0000
417 E D -0.6825
418 W D -0.1132
419 A D -0.5450
420 Q D -1.1671
421 G D 0.0000
422 F D -0.9662
423 R D -1.9493
424 M D -1.0734
425 R D -0.5969
426 F D 0.1190
427 G D 0.0000
428 L D 0.0000
429 V D 0.0000
430 Y D 0.0000
431 V D 0.0000
432 D D -1.5965
433 F D 0.0000
434 E D -2.7498
435 T D -1.7584
436 K D -1.6557
437 K D -2.0887
438 R D 0.0000
439 Y D -0.8378
440 L D 0.0000
441 R D 0.0000
442 P D 0.0000
443 S D 0.0000
444 A D 0.0000
445 L D 0.0000
446 V D 0.0000
447 F D 0.0000
448 R D -2.1225
449 E D -1.9494
450 I D 0.0000
451 A D 0.0000
452 T D -1.7855
453 Q D -2.5676
454 K D -3.1145
455 E D -2.5971
456 I D -1.6287
457 P D 0.0000
458 E D -2.2100
459 E D -1.8841
460 L D 0.0000
461 A D -1.2204
462 H D -1.1005
463 L D 0.0000
464 A D -0.7718
465 D D -1.3008
466 L D -1.1447
467 K D -2.0167
468 F D -0.9031
469 V D 0.0000
470 T D -1.5077
471 R D -2.2623
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Calculations for various pH values

This page contains details and comparisons for all models calculated at different pH points.
Please find suggestions on interpreting the results below. More details can be found in the Tutorial.
The input structure is globular. Max score is recommended for pH analysis.

pH
Average A4D Score
Max A4D Score
4.0 -0.642 3.0941 View CSV PDB
4.5 -0.7165 2.9658 View CSV PDB
5.0 -0.8105 2.8732 View CSV PDB
5.5 -0.9059 2.8185 View CSV PDB
6.0 -0.9823 2.7694 View CSV PDB
6.5 -1.024 2.734 View CSV PDB
7.0 -1.0284 2.7152 View CSV PDB
7.5 -1.0062 2.7075 View CSV PDB
8.0 -0.9695 2.7049 View CSV PDB
8.5 -0.9238 2.7039 View CSV PDB
9.0 -0.87 2.7036 View CSV PDB