Project name: 1c5e03b49eebb87

Status: done

Started: 2026-04-27 00:36:39
Chain sequence(s) A: MEKTLETVPLERKKREKEQFRKLFIGGLSFETTEESLRNYYEQWGKLTDCVVMRDPASKRSRGFGFVTFSSMAEVDAAMAARPHSIDGRVVEPKRAVAREESGKPGAHVTVKKLFVGGIKEDTEEHHLRDYFEEYGKIDTIEIITDRQSGKKRGFGFVTFDDHDPVDKIVLQKYHTINGHNAEVRKALSRQEMQEVQSSRSGRGGNFGFGDSRGGGGNFGPGPGSNFRGGSDGYGSGRGFGDGYNGYGGGPGGGNFGGSPGYGGGRGGYGGGGPGYGNQGGGYGGGYDNYGGGNYGSGNYNDFGNYNQQPSNYGPMKSGNFGGSRNMGGPYGGGNYGPGGSGGSGGYGGRSRY
input PDB
Selected Chain(s) A
Distance of aggregation 10 Å
FoldX usage Yes
pH calculations No
alphaCutter usage A:

MEKTLETVPLERKKR

EKEQFRKLFIGGLSFETTEESLRNYYEQWGKLTDCVVMRDPASKRSRGFGFVTFSSMAEVDAAMAARPHSIDGRVVEPKRAVAREESGKPGAHVTVKKLFVGGIKEDTEEHHLRDYFEEYGKIDTIEIITDRQSGKKRGFGFVTFDDHDPVDKIVLQKYHTINGHNAEVRKALSRQEMQEVQSSRSGRG

GNFGFGDSRGGGGNFGPGPGSNFRGGSDGYGSGRGFGDGYNGYGGGPGGGNFGGSPGYGGGRGGYGGGGPGYGNQGGGYGGGYDNYGGGNYGSGNYNDFGNYNQQPSNYGPMKSGNFGGSRNMGGPYGGGNYGPGGSGGSGGYGGRSRY


(Red indicates removed residues)
Dynamic mode No
Automated mutations No
Downloads Download all the data
Simulation log
[INFO]       Logger:   Verbosity set to: 2 - [INFO]                                                (00:00:01)
[WARNING]    runJob:   Working directory already exists (possibly overwriting previous results -ow 
                       to prevent this behavior)                                                   (00:00:01)
[INFO]       runJob:   Starting aggrescan3d job on: input.pdb with A chain(s) selected             (00:00:01)
[INFO]       runJob:   Creating pdb object from: input.pdb                                         (00:00:01)
[INFO]       PDB:      Running AlphaCutter                                                         (00:00:01)
[INFO]       FoldX:    Starting FoldX energy minimization                                          (00:00:36)
[INFO]       Analysis: Starting Aggrescan4D on folded.pdb                                          (00:04:34)
[INFO]       Main:     Simulation completed successfully.                                          (00:04:35)
Show buried residues

Minimal score value
-4.5286
Maximal score value
0.5389
Average score
-1.4657
Total score value
-277.0265

The table below lists A4D score for protein residues. Residues with A4D score > 0.0000 are marked by yellow rows.

residue index residue name chain Aggrescan4D score mutation
16 E A -3.0242
17 K A -3.4117
18 E A -3.2907
19 Q A -2.0244
20 F A -1.3339
21 R A -1.5985
22 K A -1.0617
23 L A 0.0000
24 F A 0.4840
25 I A 0.0000
26 G A 0.0000
27 G A -0.4524
28 L A 0.0000
29 S A 0.0000
30 F A -0.0236
31 E A -1.4946
32 T A 0.0000
33 T A -1.4597
34 E A -1.6978
35 E A -2.6140
36 S A -2.2012
37 L A 0.0000
38 R A -2.7686
39 N A -2.5825
40 Y A -1.6180
41 Y A 0.0000
42 E A -2.3711
43 Q A -2.0531
44 W A -1.0794
45 G A -1.5178
46 K A -2.5184
47 L A 0.0000
48 T A -1.7303
49 D A -2.0514
50 C A -1.0366
51 V A 0.1146
52 V A 0.0000
53 M A -0.7420
54 R A -2.1369
55 D A -2.5975
56 P A -1.6701
57 A A -1.2381
58 S A -1.9749
59 K A -3.3207
60 R A -3.3234
61 S A 0.0000
62 R A -1.8650
63 G A -0.5708
64 F A 0.3225
65 G A 0.0000
66 F A 0.5389
67 V A 0.0000
68 T A 0.0000
69 F A 0.0000
70 S A -1.4943
71 S A -1.2664
72 M A -0.8913
73 A A -0.1613
74 E A -0.8984
75 V A 0.0000
76 D A -0.5740
77 A A -0.4031
78 A A 0.0000
79 M A 0.0000
80 A A -0.2940
81 A A -0.2815
82 R A -0.6955
83 P A -0.5271
84 H A 0.0000
85 S A -0.8073
86 I A 0.0000
87 D A -2.0972
88 G A -1.8463
89 R A -1.6022
90 V A 0.0072
91 V A 0.0000
92 E A -1.7129
93 P A 0.0000
94 K A -0.7233
95 R A 0.0000
96 A A 0.0000
97 V A -0.8360
98 A A -1.8368
99 R A -3.2231
100 E A -3.4441
101 E A -3.0359
102 S A -2.5529
103 G A -2.5362
104 K A -2.9750
105 P A -1.7583
106 G A -1.1518
107 A A 0.0000
108 H A -1.1851
109 V A -0.1437
110 T A -0.4684
111 V A -0.8248
112 K A -2.2623
113 K A -1.7302
114 L A 0.0000
115 F A -0.2681
116 V A 0.0000
117 G A 0.0000
118 G A -1.7090
119 I A 0.0000
120 K A -4.0823
121 E A -4.5286
122 D A -3.7388
123 T A 0.0000
124 E A -3.7734
125 E A -3.4164
126 H A -3.1761
127 H A -2.9407
128 L A 0.0000
129 R A -3.9776
130 D A -3.7313
131 Y A -2.2460
132 F A 0.0000
133 E A -4.0969
134 E A -3.3108
135 Y A -1.6455
136 G A -2.4313
137 K A -3.3505
138 I A -2.8969
139 D A -2.8473
140 T A -1.7236
141 I A -1.5026
142 E A -1.1795
143 I A -1.0779
144 I A -0.8504
145 T A -2.3829
146 D A -2.8015
147 R A -3.2037
148 Q A -2.6370
149 S A -2.3396
150 G A -2.6214
151 K A -3.5163
152 K A -3.5656
153 R A -3.2469
154 G A -2.5004
155 F A -0.8610
156 G A 0.0000
157 F A -0.2236
158 V A 0.0000
159 T A -1.8300
160 F A 0.0000
161 D A -2.6815
162 D A -2.0243
163 H A -1.2936
164 D A -0.8616
165 P A 0.0000
166 V A 0.0000
167 D A 0.0000
168 K A -0.3432
169 I A 0.0000
170 V A -0.7515
171 L A -0.5557
172 Q A -1.4154
173 K A -1.9190
174 Y A -0.8963
175 H A 0.0000
176 T A -0.8388
177 I A 0.0000
178 N A -1.9438
179 G A -1.3797
180 H A -1.8538
181 N A -1.9889
182 A A 0.0000
183 E A -1.5586
184 V A 0.0000
185 R A -1.2495
186 K A 0.0000
187 A A 0.0000
188 L A -1.0349
189 S A -1.9959
190 R A -3.2077
191 Q A -3.4807
192 E A -3.1996
193 M A -2.8278
194 Q A -3.8459
195 E A -3.9850
196 V A 0.0000
197 Q A -3.2783
198 S A -2.8473
199 S A -2.8834
200 R A -3.6586
201 S A -2.4176
202 G A -2.4332
203 R A -2.9793
204 G A -1.9362
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