Chain sequence(s) |
A: MSISGAVLSGLGPSFLISGGKRSGVGGGAMKVGRKNVIIAPQRKKSWVSAAVKGAGNSPNDPKWLDDASEKASGYVKEKGSEVGNVSAQKGQELQNQMERAKDYIFGKAGEAMDSVAENAKRASDFVTEKGKEVKEETTSRTDKAKDFIVEKAGDVKDTAMDMRNKTSKYVGDKATEAKEAILPPKTDA
input PDB |
Selected Chain(s) | A |
Distance of aggregation | 10 Å |
FoldX usage | No |
pH calculations | No |
alphaCutter usage | No |
Dynamic mode | No |
Automated mutations | No |
Downloads | Download all the data |
Simulation log |
[INFO] Logger: Verbosity set to: 2 - [INFO] (00:00:00) [WARNING] runJob: Working directory already exists (possibly overwriting previous results -ow to prevent this behavior) (00:00:00) [INFO] runJob: Starting aggrescan3d job on: input.pdb with A chain(s) selected (00:00:00) [INFO] runJob: Creating pdb object from: input.pdb (00:00:00) [INFO] runJob: FoldX not utilized. Treating input pdb file as it was already optimized. (00:00:00) [INFO] Analysis: Starting Aggrescan4D on folded.pdb (00:00:01) [INFO] Main: Simulation completed successfully. (00:00:01) |
The table below lists A4D score for protein residues. Residues with A4D score > 0.0000 are marked by yellow rows.
residue index | residue name | chain | Aggrescan4D score | mutation |
---|---|---|---|---|
1 | M | A | 1.3844 | |
2 | S | A | 1.3215 | |
3 | I | A | 1.9162 | |
4 | S | A | 0.6779 | |
5 | G | A | 0.5194 | |
6 | A | A | 1.2171 | |
7 | V | A | 2.3256 | |
8 | L | A | 2.3565 | |
9 | S | A | 1.1184 | |
10 | G | A | 0.5693 | |
11 | L | A | 1.1636 | |
12 | G | A | 0.1913 | |
13 | P | A | 0.2963 | |
14 | S | A | 1.1648 | |
15 | F | A | 2.9854 | |
16 | L | A | 3.2822 | |
17 | I | A | 2.9853 | |
18 | S | A | 1.0467 | |
19 | G | A | -0.5910 | |
20 | G | A | -1.8038 | |
21 | K | A | -2.9694 | |
22 | R | A | -2.9931 | |
23 | S | A | -1.3453 | |
24 | G | A | -0.2511 | |
25 | V | A | 1.1733 | |
26 | G | A | -0.0841 | |
27 | G | A | -0.5371 | |
28 | G | A | -0.5162 | |
29 | A | A | 0.0128 | |
30 | M | A | 0.5811 | |
31 | K | A | -0.6254 | |
32 | V | A | 0.4208 | |
33 | G | A | -1.3816 | |
34 | R | A | -2.8309 | |
35 | K | A | -2.4512 | |
36 | N | A | -0.8896 | |
37 | V | A | 2.0691 | |
38 | I | A | 3.2940 | |
39 | I | A | 3.1375 | |
40 | A | A | 1.1902 | |
41 | P | A | -0.7658 | |
42 | Q | A | -2.6218 | |
43 | R | A | -3.8893 | |
44 | K | A | -3.6738 | |
45 | K | A | -2.8064 | |
46 | S | A | -0.6567 | |
47 | W | A | 1.1978 | |
48 | V | A | 1.9635 | |
49 | S | A | 1.2670 | |
50 | A | A | 0.8846 | |
51 | A | A | 0.5313 | |
52 | V | A | 0.8107 | |
53 | K | A | -1.0969 | |
54 | G | A | -1.1502 | |
55 | A | A | -0.9065 | |
56 | G | A | -1.7117 | |
57 | N | A | -2.5155 | |
58 | S | A | -2.1110 | |
59 | P | A | -1.7598 | |
60 | N | A | -2.3130 | |
61 | D | A | -3.0625 | |
62 | P | A | -2.5052 | |
63 | K | A | -3.4885 | |
64 | W | A | -2.4280 | |
65 | L | A | -1.9321 | |
66 | D | A | -3.6646 | |
67 | D | A | -3.8782 | |
68 | A | A | -2.4751 | |
69 | S | A | -2.5760 | |
70 | E | A | -3.3999 | |
71 | K | A | -2.9825 | |
72 | A | A | -1.6281 | |
73 | S | A | -1.4555 | |
74 | G | A | -1.5648 | |
75 | Y | A | -0.1972 | |
76 | V | A | 0.0116 | |
77 | K | A | -2.2322 | |
78 | E | A | -2.6006 | |
79 | K | A | -1.9350 | |
80 | G | A | -1.4463 | |
81 | S | A | -2.0597 | |
82 | E | A | -2.6009 | |
83 | V | A | -1.2839 | |
84 | G | A | -1.2385 | |
85 | N | A | -1.3710 | |
86 | V | A | -1.0359 | |
87 | S | A | -1.2040 | |
88 | A | A | -1.7011 | |
89 | Q | A | -2.7751 | |
90 | K | A | -3.4154 | |
91 | G | A | -2.6132 | |
92 | Q | A | -3.8644 | |
93 | E | A | -4.3796 | |
94 | L | A | -3.1165 | |
95 | Q | A | -3.6857 | |
96 | N | A | -4.4539 | |
97 | Q | A | -4.0329 | |
98 | M | A | -2.9098 | |
99 | E | A | -4.4780 | |
100 | R | A | -3.8411 | |
101 | A | A | -2.2180 | |
102 | K | A | -2.5542 | |
103 | D | A | -2.3722 | |
104 | Y | A | -0.2473 | |
105 | I | A | 0.0948 | |
106 | F | A | 0.6835 | |
107 | G | A | -0.6850 | |
108 | K | A | -1.4540 | |
109 | A | A | -0.4333 | |
110 | G | A | -0.9605 | |
111 | E | A | -2.2197 | |
112 | A | A | -1.1449 | |
113 | M | A | -0.5557 | |
114 | D | A | -2.3492 | |
115 | S | A | -1.5355 | |
116 | V | A | -0.3884 | |
117 | A | A | -1.6709 | |
118 | E | A | -3.2539 | |
119 | N | A | -3.0536 | |
120 | A | A | -2.2079 | |
121 | K | A | -3.4239 | |
122 | R | A | -3.2828 | |
123 | A | A | -1.7406 | |
124 | S | A | -1.9311 | |
125 | D | A | -2.5728 | |
126 | F | A | -0.1982 | |
127 | V | A | 0.0857 | |
128 | T | A | -1.8962 | |
129 | E | A | -3.0239 | |
130 | K | A | -2.9673 | |
131 | G | A | -2.5032 | |
132 | K | A | -3.9934 | |
133 | E | A | -4.1997 | |
134 | V | A | -2.3206 | |
135 | K | A | -3.6605 | |
136 | E | A | -3.7098 | |
137 | E | A | -3.0383 | |
138 | T | A | -1.8260 | |
139 | T | A | -1.4904 | |
140 | S | A | -1.6058 | |
141 | R | A | -2.6325 | |
142 | T | A | -2.7471 | |
143 | D | A | -3.6725 | |
144 | K | A | -3.1853 | |
145 | A | A | -1.6510 | |
146 | K | A | -2.2002 | |
147 | D | A | -2.0467 | |
148 | F | A | 0.4188 | |
149 | I | A | 1.4268 | |
150 | V | A | 0.5211 | |
151 | E | A | -1.6040 | |
152 | K | A | -1.6014 | |
153 | A | A | -0.7405 | |
154 | G | A | -1.9950 | |
155 | D | A | -2.9367 | |
156 | V | A | -1.1435 | |
157 | K | A | -2.4054 | |
158 | D | A | -2.8349 | |
159 | T | A | -1.6872 | |
160 | A | A | -0.8887 | |
161 | M | A | -1.4209 | |
162 | D | A | -2.5670 | |
163 | M | A | -2.2330 | |
164 | R | A | -2.9394 | |
165 | N | A | -3.1591 | |
166 | K | A | -2.9757 | |
167 | T | A | -1.6103 | |
168 | S | A | -2.0974 | |
169 | K | A | -2.6483 | |
170 | Y | A | -0.7863 | |
171 | V | A | -0.1529 | |
172 | G | A | -1.5527 | |
173 | D | A | -2.7539 | |
174 | K | A | -2.5434 | |
175 | A | A | -2.0352 | |
176 | T | A | -2.6239 | |
177 | E | A | -3.6171 | |
178 | A | A | -2.0951 | |
179 | K | A | -2.5274 | |
180 | E | A | -2.3849 | |
181 | A | A | -0.6014 | |
182 | I | A | 0.8950 | |
183 | L | A | 0.9219 | |
184 | P | A | -0.1045 | |
185 | P | A | -1.1336 | |
186 | K | A | -2.2217 | |
187 | T | A | -1.8915 | |
188 | D | A | -2.3678 | |
189 | A | A | -1.0716 |