Project name: 213b28a28d2f69c

Status: done

Started: 2025-02-21 07:06:20
Chain sequence(s) A: MAMSFSGAVLTGMASSFHSGAKQSSFGAVRVGQKTQFVVVSQRKKSLIYAAKGDGNILDDLNEATKKASDFVTDKTKEALADGEKAKDYVVEKNSETADTLGKEAEKAAAYVEEKGKEAANKAAEFAEGKAGEAKDATK
input PDB
Selected Chain(s) A
Distance of aggregation 10 Å
FoldX usage No
pH calculations No
alphaCutter usage No
Dynamic mode No
Automated mutations No
Downloads Download all the data
Simulation log
[INFO]       Logger:   Verbosity set to: 2 - [INFO]                                                (00:00:00)
[WARNING]    runJob:   Working directory already exists (possibly overwriting previous results -ow 
                       to prevent this behavior)                                                   (00:00:00)
[INFO]       runJob:   Starting aggrescan3d job on: input.pdb with A chain(s) selected             (00:00:00)
[INFO]       runJob:   Creating pdb object from: input.pdb                                         (00:00:00)
[INFO]       runJob:   FoldX not utilized. Treating input pdb file as it was already optimized.    (00:00:00)
[INFO]       Analysis: Starting Aggrescan4D on folded.pdb                                          (00:00:01)
[INFO]       Main:     Simulation completed successfully.                                          (00:00:01)
Show buried residues

Minimal score value
-4.4866
Maximal score value
3.8306
Average score
-1.3875
Total score value
-192.8666

The table below lists A4D score for protein residues. Residues with A4D score > 0.0000 are marked by yellow rows.

residue index residue name chain Aggrescan4D score mutation
1 M A 1.3241
2 A A 1.2358
3 M A 1.6531
4 S A 1.2778
5 F A 1.8658
6 S A 0.7336
7 G A 0.4867
8 A A 1.2500
9 V A 2.3541
10 L A 2.2388
11 T A 1.1623
12 G A 0.5596
13 M A 0.7681
14 A A 0.3549
15 S A 0.3218
16 S A 0.4702
17 F A 1.1971
18 H A -0.3440
19 S A -0.6393
20 G A -1.0982
21 A A -1.5702
22 K A -2.4532
23 Q A -1.9788
24 S A -0.8877
25 S A -0.0801
26 F A 1.9991
27 G A 1.0616
28 A A 1.4484
29 V A 1.9209
30 R A -0.3841
31 V A 0.7028
32 G A -0.9837
33 Q A -2.2816
34 K A -2.2429
35 T A -1.4180
36 Q A -0.7326
37 F A 2.4940
38 V A 3.2233
39 V A 3.8306
40 V A 2.3926
41 S A 0.0943
42 Q A -2.0415
43 R A -3.3034
44 K A -3.6076
45 K A -2.8422
46 S A -0.8228
47 L A 1.7940
48 I A 3.5013
49 Y A 3.6094
50 A A 2.0146
51 A A 0.2200
52 K A -2.0809
53 G A -2.5123
54 D A -2.8584
55 G A -2.5229
56 N A -2.2903
57 I A -1.6345
58 L A -0.4946
59 D A -2.9208
60 D A -3.2678
61 L A -1.9074
62 N A -3.2576
63 E A -4.1264
64 A A -2.9597
65 T A -2.7843
66 K A -3.6966
67 K A -2.9740
68 A A -1.3960
69 S A -1.5758
70 D A -2.2047
71 F A -0.0672
72 V A 0.1084
73 T A -1.5117
74 D A -2.9863
75 K A -2.8013
76 T A -2.1790
77 K A -3.4671
78 E A -3.9053
79 A A -2.6235
80 L A -2.4704
81 A A -2.8714
82 D A -3.4034
83 G A -3.1012
84 E A -3.9340
85 K A -3.4553
86 A A -1.9378
87 K A -2.3779
88 D A -2.3335
89 Y A -0.3338
90 V A 0.0564
91 V A 0.1333
92 E A -1.9781
93 K A -2.7024
94 N A -2.2405
95 S A -2.2395
96 E A -2.9277
97 T A -1.7527
98 A A -1.2204
99 D A -2.0804
100 T A -1.4436
101 L A -0.6245
102 G A -2.3063
103 K A -3.6965
104 E A -3.4699
105 A A -2.4820
106 E A -3.2796
107 K A -3.2015
108 A A -1.3369
109 A A -1.2408
110 A A -1.3487
111 Y A -0.2374
112 V A -0.1925
113 E A -2.7660
114 E A -3.3891
115 K A -3.1874
116 G A -3.1444
117 K A -4.3102
118 E A -4.4866
119 A A -3.2712
120 A A -2.6709
121 N A -3.4031
122 K A -3.2101
123 A A -1.7019
124 A A -1.8742
125 E A -2.7451
126 F A -0.6479
127 A A -1.5619
128 E A -3.0611
129 G A -2.4558
130 K A -3.0846
131 A A -2.7469
132 G A -3.2751
133 E A -3.8783
134 A A -2.6987
135 K A -3.7073
136 D A -3.6705
137 A A -2.2468
138 T A -2.1024
139 K A -2.4890
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