Chain sequence(s) |
A: MAMSFSGAVLTGMASSFHSGAKQSSFGAVRVGQKTQFVVVSQRKKSLIYAAKGDGNILDDLNEATKKASDFVTDKTKEALADGEKAKDYVVEKNSETADTLGKEAEKAAAYVEEKGKEAANKAAEFAEGKAGEAKDATK
input PDB |
Selected Chain(s) | A |
Distance of aggregation | 10 Å |
FoldX usage | No |
pH calculations | No |
alphaCutter usage | No |
Dynamic mode | No |
Automated mutations | No |
Downloads | Download all the data |
Simulation log |
[INFO] Logger: Verbosity set to: 2 - [INFO] (00:00:00) [WARNING] runJob: Working directory already exists (possibly overwriting previous results -ow to prevent this behavior) (00:00:00) [INFO] runJob: Starting aggrescan3d job on: input.pdb with A chain(s) selected (00:00:00) [INFO] runJob: Creating pdb object from: input.pdb (00:00:00) [INFO] runJob: FoldX not utilized. Treating input pdb file as it was already optimized. (00:00:00) [INFO] Analysis: Starting Aggrescan4D on folded.pdb (00:00:01) [INFO] Main: Simulation completed successfully. (00:00:01) |
The table below lists A4D score for protein residues. Residues with A4D score > 0.0000 are marked by yellow rows.
residue index | residue name | chain | Aggrescan4D score | mutation |
---|---|---|---|---|
1 | M | A | 1.3241 | |
2 | A | A | 1.2358 | |
3 | M | A | 1.6531 | |
4 | S | A | 1.2778 | |
5 | F | A | 1.8658 | |
6 | S | A | 0.7336 | |
7 | G | A | 0.4867 | |
8 | A | A | 1.2500 | |
9 | V | A | 2.3541 | |
10 | L | A | 2.2388 | |
11 | T | A | 1.1623 | |
12 | G | A | 0.5596 | |
13 | M | A | 0.7681 | |
14 | A | A | 0.3549 | |
15 | S | A | 0.3218 | |
16 | S | A | 0.4702 | |
17 | F | A | 1.1971 | |
18 | H | A | -0.3440 | |
19 | S | A | -0.6393 | |
20 | G | A | -1.0982 | |
21 | A | A | -1.5702 | |
22 | K | A | -2.4532 | |
23 | Q | A | -1.9788 | |
24 | S | A | -0.8877 | |
25 | S | A | -0.0801 | |
26 | F | A | 1.9991 | |
27 | G | A | 1.0616 | |
28 | A | A | 1.4484 | |
29 | V | A | 1.9209 | |
30 | R | A | -0.3841 | |
31 | V | A | 0.7028 | |
32 | G | A | -0.9837 | |
33 | Q | A | -2.2816 | |
34 | K | A | -2.2429 | |
35 | T | A | -1.4180 | |
36 | Q | A | -0.7326 | |
37 | F | A | 2.4940 | |
38 | V | A | 3.2233 | |
39 | V | A | 3.8306 | |
40 | V | A | 2.3926 | |
41 | S | A | 0.0943 | |
42 | Q | A | -2.0415 | |
43 | R | A | -3.3034 | |
44 | K | A | -3.6076 | |
45 | K | A | -2.8422 | |
46 | S | A | -0.8228 | |
47 | L | A | 1.7940 | |
48 | I | A | 3.5013 | |
49 | Y | A | 3.6094 | |
50 | A | A | 2.0146 | |
51 | A | A | 0.2200 | |
52 | K | A | -2.0809 | |
53 | G | A | -2.5123 | |
54 | D | A | -2.8584 | |
55 | G | A | -2.5229 | |
56 | N | A | -2.2903 | |
57 | I | A | -1.6345 | |
58 | L | A | -0.4946 | |
59 | D | A | -2.9208 | |
60 | D | A | -3.2678 | |
61 | L | A | -1.9074 | |
62 | N | A | -3.2576 | |
63 | E | A | -4.1264 | |
64 | A | A | -2.9597 | |
65 | T | A | -2.7843 | |
66 | K | A | -3.6966 | |
67 | K | A | -2.9740 | |
68 | A | A | -1.3960 | |
69 | S | A | -1.5758 | |
70 | D | A | -2.2047 | |
71 | F | A | -0.0672 | |
72 | V | A | 0.1084 | |
73 | T | A | -1.5117 | |
74 | D | A | -2.9863 | |
75 | K | A | -2.8013 | |
76 | T | A | -2.1790 | |
77 | K | A | -3.4671 | |
78 | E | A | -3.9053 | |
79 | A | A | -2.6235 | |
80 | L | A | -2.4704 | |
81 | A | A | -2.8714 | |
82 | D | A | -3.4034 | |
83 | G | A | -3.1012 | |
84 | E | A | -3.9340 | |
85 | K | A | -3.4553 | |
86 | A | A | -1.9378 | |
87 | K | A | -2.3779 | |
88 | D | A | -2.3335 | |
89 | Y | A | -0.3338 | |
90 | V | A | 0.0564 | |
91 | V | A | 0.1333 | |
92 | E | A | -1.9781 | |
93 | K | A | -2.7024 | |
94 | N | A | -2.2405 | |
95 | S | A | -2.2395 | |
96 | E | A | -2.9277 | |
97 | T | A | -1.7527 | |
98 | A | A | -1.2204 | |
99 | D | A | -2.0804 | |
100 | T | A | -1.4436 | |
101 | L | A | -0.6245 | |
102 | G | A | -2.3063 | |
103 | K | A | -3.6965 | |
104 | E | A | -3.4699 | |
105 | A | A | -2.4820 | |
106 | E | A | -3.2796 | |
107 | K | A | -3.2015 | |
108 | A | A | -1.3369 | |
109 | A | A | -1.2408 | |
110 | A | A | -1.3487 | |
111 | Y | A | -0.2374 | |
112 | V | A | -0.1925 | |
113 | E | A | -2.7660 | |
114 | E | A | -3.3891 | |
115 | K | A | -3.1874 | |
116 | G | A | -3.1444 | |
117 | K | A | -4.3102 | |
118 | E | A | -4.4866 | |
119 | A | A | -3.2712 | |
120 | A | A | -2.6709 | |
121 | N | A | -3.4031 | |
122 | K | A | -3.2101 | |
123 | A | A | -1.7019 | |
124 | A | A | -1.8742 | |
125 | E | A | -2.7451 | |
126 | F | A | -0.6479 | |
127 | A | A | -1.5619 | |
128 | E | A | -3.0611 | |
129 | G | A | -2.4558 | |
130 | K | A | -3.0846 | |
131 | A | A | -2.7469 | |
132 | G | A | -3.2751 | |
133 | E | A | -3.8783 | |
134 | A | A | -2.6987 | |
135 | K | A | -3.7073 | |
136 | D | A | -3.6705 | |
137 | A | A | -2.2468 | |
138 | T | A | -2.1024 | |
139 | K | A | -2.4890 |