Chain sequence(s) |
A: MEYGQQGQRGHGRTGHVDQYGNPVGGVEHGTGGMRHGTGTTGGMGQLGEHGGAGMGGGQFQPAREEHKTGGILHRSGSSSSSSSEDDGMGGRRKKGIKEKIKEKLPGGHKDDQHATATTGGAYGQQGHTGSAYGQQGHTGGAYATGTEGTGEKKGIMDKIKEKLPGQH
input PDB |
Selected Chain(s) | A |
Distance of aggregation | 10 Å |
FoldX usage | No |
pH calculations | No |
alphaCutter usage | No |
Dynamic mode | No |
Automated mutations | No |
Downloads | Download all the data |
Simulation log |
[INFO] Logger: Verbosity set to: 2 - [INFO] (00:00:00) [WARNING] runJob: Working directory already exists (possibly overwriting previous results -ow to prevent this behavior) (00:00:00) [INFO] runJob: Starting aggrescan3d job on: input.pdb with A chain(s) selected (00:00:00) [INFO] runJob: Creating pdb object from: input.pdb (00:00:00) [INFO] runJob: FoldX not utilized. Treating input pdb file as it was already optimized. (00:00:01) [INFO] Analysis: Starting Aggrescan4D on folded.pdb (00:00:01) [INFO] Main: Simulation completed successfully. (00:00:02) |
The table below lists A4D score for protein residues. Residues with A4D score > 0.0000 are marked by yellow rows.
residue index | residue name | chain | Aggrescan4D score | mutation |
---|---|---|---|---|
1 | M | A | 0.4098 | |
2 | E | A | -0.9109 | |
3 | Y | A | -0.0644 | |
4 | G | A | -0.9769 | |
5 | Q | A | -2.2111 | |
6 | Q | A | -2.5773 | |
7 | G | A | -2.7140 | |
8 | Q | A | -3.0552 | |
9 | R | A | -3.3534 | |
10 | G | A | -2.7930 | |
11 | H | A | -2.6543 | |
12 | G | A | -2.3635 | |
13 | R | A | -2.7468 | |
14 | T | A | -1.5701 | |
15 | G | A | -1.2821 | |
16 | H | A | -0.6811 | |
17 | V | A | 0.6691 | |
18 | D | A | -0.3163 | |
19 | Q | A | -0.7543 | |
20 | Y | A | 0.2695 | |
21 | G | A | -0.3423 | |
22 | N | A | -0.7938 | |
23 | P | A | -0.3595 | |
24 | V | A | 1.0634 | |
25 | G | A | -0.2147 | |
26 | G | A | -0.0098 | |
27 | V | A | 0.3931 | |
28 | E | A | -1.7510 | |
29 | H | A | -1.7479 | |
30 | G | A | -1.2710 | |
31 | T | A | -1.0808 | |
32 | G | A | -0.7744 | |
33 | G | A | -0.6832 | |
34 | M | A | -0.4088 | |
35 | R | A | -1.9923 | |
36 | H | A | -2.0150 | |
37 | G | A | -1.6162 | |
38 | T | A | -0.7500 | |
39 | G | A | -0.7567 | |
40 | T | A | -0.4354 | |
41 | T | A | -0.5389 | |
42 | G | A | -0.6031 | |
43 | G | A | -0.4745 | |
44 | M | A | 0.2522 | |
45 | G | A | -0.5112 | |
46 | Q | A | -0.9378 | |
47 | L | A | 0.1732 | |
48 | G | A | -1.2489 | |
49 | E | A | -2.4711 | |
50 | H | A | -2.1428 | |
51 | G | A | -1.7449 | |
52 | G | A | -1.0901 | |
53 | A | A | -0.3730 | |
54 | G | A | -0.3080 | |
55 | M | A | 0.3889 | |
56 | G | A | -0.5918 | |
57 | G | A | -0.7963 | |
58 | G | A | -0.9580 | |
59 | Q | A | -0.9284 | |
60 | F | A | 0.5556 | |
61 | Q | A | -0.9295 | |
62 | P | A | -1.2626 | |
63 | A | A | -1.8016 | |
64 | R | A | -3.5002 | |
65 | E | A | -4.1147 | |
66 | E | A | -4.1248 | |
67 | H | A | -3.4895 | |
68 | K | A | -3.2020 | |
69 | T | A | -1.5455 | |
70 | G | A | -0.6934 | |
71 | G | A | 0.3649 | |
72 | I | A | 1.8911 | |
73 | L | A | 1.3091 | |
74 | H | A | -0.7770 | |
75 | R | A | -1.9044 | |
76 | S | A | -1.5333 | |
77 | G | A | -1.4574 | |
78 | S | A | -0.9545 | |
79 | S | A | -0.6329 | |
80 | S | A | -0.6073 | |
81 | S | A | -0.5460 | |
82 | S | A | -0.7298 | |
83 | S | A | -1.0737 | |
84 | S | A | -2.0120 | |
85 | E | A | -3.3704 | |
86 | D | A | -3.6425 | |
87 | D | A | -3.1450 | |
88 | G | A | -1.8528 | |
89 | M | A | -0.8226 | |
90 | G | A | -1.6687 | |
91 | G | A | -2.5136 | |
92 | R | A | -3.4174 | |
93 | R | A | -4.0986 | |
94 | K | A | -3.7202 | |
95 | K | A | -3.6678 | |
96 | G | A | -1.9373 | |
97 | I | A | -0.1478 | |
98 | K | A | -1.8378 | |
99 | E | A | -2.7469 | |
100 | K | A | -2.0761 | |
101 | I | A | -0.5276 | |
102 | K | A | -2.4541 | |
103 | E | A | -3.1873 | |
104 | K | A | -2.5585 | |
105 | L | A | -1.3446 | |
106 | P | A | -1.2284 | |
107 | G | A | -1.8681 | |
108 | G | A | -2.4423 | |
109 | H | A | -3.3299 | |
110 | K | A | -3.9262 | |
111 | D | A | -4.0770 | |
112 | D | A | -3.9749 | |
113 | Q | A | -3.2308 | |
114 | H | A | -2.5820 | |
115 | A | A | -1.3521 | |
116 | T | A | -0.8615 | |
117 | A | A | -0.4113 | |
118 | T | A | -0.2903 | |
119 | T | A | -0.4460 | |
120 | G | A | -0.5830 | |
121 | G | A | -0.3979 | |
122 | A | A | 0.2155 | |
123 | Y | A | 0.4266 | |
124 | G | A | -1.6925 | |
125 | Q | A | -2.8161 | |
126 | Q | A | -3.4007 | |
127 | G | A | -3.1886 | |
128 | H | A | -2.3814 | |
129 | T | A | -0.9938 | |
130 | G | A | -0.8448 | |
131 | S | A | 0.0138 | |
132 | A | A | 0.4655 | |
133 | Y | A | 0.7936 | |
134 | G | A | -0.5580 | |
135 | Q | A | -2.0253 | |
136 | Q | A | -2.4637 | |
137 | G | A | -2.0246 | |
138 | H | A | -1.7977 | |
139 | T | A | -1.1785 | |
140 | G | A | -0.8558 | |
141 | G | A | -0.4119 | |
142 | A | A | 0.3042 | |
143 | Y | A | 1.0982 | |
144 | A | A | 0.4514 | |
145 | T | A | 0.1794 | |
146 | G | A | -0.7956 | |
147 | T | A | -1.6167 | |
148 | E | A | -2.7612 | |
149 | G | A | -2.1083 | |
150 | T | A | -1.6316 | |
151 | G | A | -2.4160 | |
152 | E | A | -3.6814 | |
153 | K | A | -3.4275 | |
154 | K | A | -3.3505 | |
155 | G | A | -0.8446 | |
156 | I | A | 1.2739 | |
157 | M | A | 0.7512 | |
158 | D | A | -1.6633 | |
159 | K | A | -1.7535 | |
160 | I | A | 0.0619 | |
161 | K | A | -1.9031 | |
162 | E | A | -2.9855 | |
163 | K | A | -2.2840 | |
164 | L | A | -0.4351 | |
165 | P | A | -1.1064 | |
166 | G | A | -1.7341 | |
167 | Q | A | -1.7783 | |
168 | H | A | -1.8694 |