Chain sequence(s) |
A: MASYQNRPGGQATDEYGNPIQQQYDEYGNPMGGGGYGTGGGGGATGGQGYGTGGQGYGSGGQGYGTGGQGYGTGTGTEGFGTGGGARHHGQEQLHKESGGGLGGMLHRSGSGSSSSSEDDGQGGRRKKGITQKIKEKLPGHHDQSGQAQAMGGMGSGYDAGGYGGEHHEKKGMMDKIKEKLPGGGR
input PDB |
Selected Chain(s) | A |
Distance of aggregation | 10 Å |
FoldX usage | No |
pH calculations | No |
alphaCutter usage | No |
Dynamic mode | No |
Automated mutations | No |
Downloads | Download all the data |
Simulation log |
[INFO] Logger: Verbosity set to: 2 - [INFO] (00:00:00) [WARNING] runJob: Working directory already exists (possibly overwriting previous results -ow to prevent this behavior) (00:00:00) [INFO] runJob: Starting aggrescan3d job on: input.pdb with A chain(s) selected (00:00:00) [INFO] runJob: Creating pdb object from: input.pdb (00:00:00) [INFO] runJob: FoldX not utilized. Treating input pdb file as it was already optimized. (00:00:00) [INFO] Analysis: Starting Aggrescan4D on folded.pdb (00:00:01) [INFO] Main: Simulation completed successfully. (00:00:01) |
The table below lists A4D score for protein residues. Residues with A4D score > 0.0000 are marked by yellow rows.
residue index | residue name | chain | Aggrescan4D score | mutation |
---|---|---|---|---|
1 | M | A | 1.1839 | |
2 | A | A | 0.6579 | |
3 | S | A | 0.1914 | |
4 | Y | A | 0.1257 | |
5 | Q | A | -1.7797 | |
6 | N | A | -2.6149 | |
7 | R | A | -3.0925 | |
8 | P | A | -2.1708 | |
9 | G | A | -1.8589 | |
10 | G | A | -2.0853 | |
11 | Q | A | -1.9593 | |
12 | A | A | -1.0227 | |
13 | T | A | -1.1675 | |
14 | D | A | -1.3892 | |
15 | E | A | -1.6760 | |
16 | Y | A | -0.2245 | |
17 | G | A | -1.0105 | |
18 | N | A | -1.5721 | |
19 | P | A | -1.1307 | |
20 | I | A | -0.2945 | |
21 | Q | A | -1.1918 | |
22 | Q | A | -1.2477 | |
23 | Q | A | -1.3729 | |
24 | Y | A | -0.4512 | |
25 | D | A | -0.8807 | |
26 | E | A | -1.4707 | |
27 | Y | A | 0.0347 | |
28 | G | A | -0.7718 | |
29 | N | A | -1.2708 | |
30 | P | A | -1.0972 | |
31 | M | A | -0.4412 | |
32 | G | A | -0.8888 | |
33 | G | A | -0.9146 | |
34 | G | A | -0.7147 | |
35 | G | A | -0.4029 | |
36 | Y | A | 0.6093 | |
37 | G | A | -0.3283 | |
38 | T | A | -0.3983 | |
39 | G | A | -0.8618 | |
40 | G | A | -1.1894 | |
41 | G | A | -1.1645 | |
42 | G | A | -1.0997 | |
43 | G | A | -0.9281 | |
44 | A | A | -0.5966 | |
45 | T | A | -0.7891 | |
46 | G | A | -1.1597 | |
47 | G | A | -1.2705 | |
48 | Q | A | -1.5184 | |
49 | G | A | -0.7820 | |
50 | Y | A | 0.4246 | |
51 | G | A | -0.3843 | |
52 | T | A | -0.3312 | |
53 | G | A | -1.0118 | |
54 | G | A | -1.3405 | |
55 | Q | A | -1.4722 | |
56 | G | A | -0.7436 | |
57 | Y | A | 0.4083 | |
58 | G | A | -0.3721 | |
59 | S | A | -0.6737 | |
60 | G | A | -1.1901 | |
61 | G | A | -1.3674 | |
62 | Q | A | -1.5174 | |
63 | G | A | -0.7707 | |
64 | Y | A | 0.3928 | |
65 | G | A | -0.3748 | |
66 | T | A | -0.4834 | |
67 | G | A | -1.0806 | |
68 | G | A | -1.3404 | |
69 | Q | A | -1.5044 | |
70 | G | A | -0.7809 | |
71 | Y | A | 0.4275 | |
72 | G | A | -0.3203 | |
73 | T | A | -0.3377 | |
74 | G | A | -0.6564 | |
75 | T | A | -0.8370 | |
76 | G | A | -1.3188 | |
77 | T | A | -1.1702 | |
78 | E | A | -1.7581 | |
79 | G | A | -0.6491 | |
80 | F | A | 0.8914 | |
81 | G | A | -0.1435 | |
82 | T | A | -0.2602 | |
83 | G | A | -0.7338 | |
84 | G | A | -1.2007 | |
85 | G | A | -1.4401 | |
86 | A | A | -1.5844 | |
87 | R | A | -2.7623 | |
88 | H | A | -2.7013 | |
89 | H | A | -2.5536 | |
90 | G | A | -2.4220 | |
91 | Q | A | -2.7710 | |
92 | E | A | -2.9226 | |
93 | Q | A | -2.0329 | |
94 | L | A | -0.7223 | |
95 | H | A | -1.9374 | |
96 | K | A | -2.9002 | |
97 | E | A | -3.0057 | |
98 | S | A | -1.9869 | |
99 | G | A | -1.4610 | |
100 | G | A | -0.8953 | |
101 | G | A | -0.2813 | |
102 | L | A | 0.9400 | |
103 | G | A | 0.2924 | |
104 | G | A | 0.4568 | |
105 | M | A | 1.0847 | |
106 | L | A | 0.8016 | |
107 | H | A | -1.0282 | |
108 | R | A | -1.9727 | |
109 | S | A | -1.5389 | |
110 | G | A | -1.4687 | |
111 | S | A | -1.0049 | |
112 | G | A | -0.8467 | |
113 | S | A | -0.6964 | |
114 | S | A | -0.6020 | |
115 | S | A | -0.7082 | |
116 | S | A | -1.1160 | |
117 | S | A | -1.9748 | |
118 | E | A | -3.4410 | |
119 | D | A | -3.9959 | |
120 | D | A | -3.8637 | |
121 | G | A | -2.8805 | |
122 | Q | A | -2.8460 | |
123 | G | A | -2.6809 | |
124 | G | A | -2.7749 | |
125 | R | A | -4.0108 | |
126 | R | A | -4.2868 | |
127 | K | A | -3.8356 | |
128 | K | A | -3.2071 | |
129 | G | A | -1.6563 | |
130 | I | A | 0.4103 | |
131 | T | A | -0.5433 | |
132 | Q | A | -2.1332 | |
133 | K | A | -1.9524 | |
134 | I | A | -0.3322 | |
135 | K | A | -2.4448 | |
136 | E | A | -3.2424 | |
137 | K | A | -2.3425 | |
138 | L | A | -0.5131 | |
139 | P | A | -1.1029 | |
140 | G | A | -1.7673 | |
141 | H | A | -2.8653 | |
142 | H | A | -2.9631 | |
143 | D | A | -3.3860 | |
144 | Q | A | -3.0127 | |
145 | S | A | -2.0594 | |
146 | G | A | -1.9238 | |
147 | Q | A | -1.9734 | |
148 | A | A | -1.2392 | |
149 | Q | A | -1.2898 | |
150 | A | A | -0.2441 | |
151 | M | A | 0.5851 | |
152 | G | A | -0.0851 | |
153 | G | A | -0.1308 | |
154 | M | A | 0.4871 | |
155 | G | A | -0.2188 | |
156 | S | A | -0.2878 | |
157 | G | A | -0.3522 | |
158 | Y | A | 0.0554 | |
159 | D | A | -1.4463 | |
160 | A | A | -0.8395 | |
161 | G | A | -0.7231 | |
162 | G | A | -0.3963 | |
163 | Y | A | 0.3649 | |
164 | G | A | -0.9553 | |
165 | G | A | -1.7725 | |
166 | E | A | -3.0241 | |
167 | H | A | -3.6586 | |
168 | H | A | -3.8551 | |
169 | E | A | -3.8747 | |
170 | K | A | -3.5995 | |
171 | K | A | -3.5205 | |
172 | G | A | -2.1242 | |
173 | M | A | -0.8946 | |
174 | M | A | -1.2470 | |
175 | D | A | -3.1690 | |
176 | K | A | -2.5441 | |
177 | I | A | -0.4352 | |
178 | K | A | -2.5567 | |
179 | E | A | -3.3648 | |
180 | K | A | -2.4895 | |
181 | L | A | -0.4832 | |
182 | P | A | -0.9331 | |
183 | G | A | -1.4429 | |
184 | G | A | -1.8038 | |
185 | G | A | -1.7703 | |
186 | R | A | -2.2589 |