Project name: NP_stalk20

Status: done

Started: 2026-06-10 09:54:06
Chain sequence(s) A: SSVLKTFERFTIQQELQEQSEDTPIPLETIRPTIRVFVINNNDPVVRSRLLFFNLRIIMSNTAREGHRAGALLSLLSLPSAAMSNHIKLAMHSPEASIDRVEITGFENNSFRVIPDARTSTMSRGEVLAFEALAEDIPDELKSTQNAIDKITNKVNSVIELTLNHQTPFVNLQNDVEDDIFDETEKFLDVCYSVLMQAWIVTCKCMTAPDQPPVSVAKRMAKYQQQGRINACRYVLQPEAQRLIQNAIRKSMVVRHFMTYELQLSQSRSLLANRYYAMVGDIGKYIEHSGMGGFFLTLKYGLGTRWPTLALAAFSGELQKLKALMLHYQSLGPMAKYMALLESPKLMDFVPSEYPLVYSYAMGIGTVLDTNMRNYAYGRSYLNPQYFQLGVETARKQQGAVDNRTAEDLGMTAADKADLTATISKLSLSQLPRGRQPISDPFAGANDRETGGQATDTPVYNFNSLNNRRYDNYDSDSEDRIDNDQDQAIRENRGEPGQPNNQTSENQQRLNLPVPQCTSGMSSEEFQHSMNQYIRAMHEQYRGSQDDDANDATDGNDISLELVGDFDSHHHHHH
B: SSVLKTFERFTIQQELQEQSEDTPIPLETIRPTIRVFVINNNDPVVRSRLLFFNLRIIMSNTAREGHRAGALLSLLSLPSAAMSNHIKLAMHSPEASIDRVEITGFENNSFRVIPDARTSTMSRGEVLAFEALAEDIPDELKSTQNAIDKITNKVNSVIELTLNHQTPFVNLQNDVEDDIFDETEKFLDVCYSVLMQAWIVTCKCMTAPDQPPVSVAKRMAKYQQQGRINACRYVLQPEAQRLIQNAIRKSMVVRHFMTYELQLSQSRSLLANRYYAMVGDIGKYIEHSGMGGFFLTLKYGLGTRWPTLALAAFSGELQKLKALMLHYQSLGPMAKYMALLESPKLMDFVPSEYPLVYSYAMGIGTVLDTNMRNYAYGRSYLNPQYFQLGVETARKQQGAVDNRTAEDLGMTAADKADLTATISKLSLSQLPRGRQPISDPFAGANDRETGGQATDTPVYNFNSLNNRRYDNYDSDSEDRIDNDQDQAIRENRGEPGQPNNQTSENQQRLNLPVPQCTSGMSSEEFQHSMNQYIRAMHEQYRGSQDDDANDATDGNDISLELVGDFDSHHHHHH
input PDB
Selected Chain(s) A,B
Distance of aggregation 10 Å
FoldX usage Yes
pH calculations Yes
alphaCutter usage A: SSVLKTFERFTIQQELQEQSEDTPIPLETIRPTIRVFVINNNDPVVRSRLLFFNLRIIMSNTAREGHRAGALLSLLSLPSAAMSNHIKLAMHSPEASIDRVEITGFENNSFRVIPDARTSTMSRGEVLAFEALAEDIPDELKSTQNAIDKITNKVNSVIELTLNHQTPFVNLQNDVEDDIFDETEKFLDVCYSVLMQAWIVTCKCMTAPDQPPVSVAKRMAKYQQQGRINACRYVLQPEAQRLIQNAIRKSMVVRHFMTYELQLSQSRSLLANRYYAMVGDIGKYIEHSGMGGFFLTLKYGLGTRWPTLALAAFSGELQKLKALMLHYQSLGPMAKYMALLESPKLMDFVPSEYPLVYSYAMGIGTVLDTNMRNYAYGRSYLNPQYFQLGVETARKQQGAVDNRTAEDLGMTAADKADLTATISKLSLSQLPRGRQPISDPFAGANDRE

TGGQATDTPVYNFNSLNNRRYDNYDSDSEDRIDNDQDQAIRENRGEPGQPNNQTSENQQRLN

LPVPQCTSGMSSEEFQHSMNQYIRAMHEQYRGSQDDDANDAT

DGNDISLELVGDFDSHHHHHH


B: SSVLKTFERFTIQQELQEQSEDTPIPLETIRPTIRVFVINNNDPVVRSRLLFFNLRIIMSNTAREGHRAGALLSLLSLPSAAMSNHIKLAMHSPEASIDRVEITGFENNSFRVIPDARTSTMSRGEVLAFEALAEDIPDELKSTQNAIDKITNKVNSVIELTLNHQTPFVNLQNDVEDDIFDETEKFLDVCYSVLMQAWIVTCKCMTAPDQPPVSVAKRMAKYQQQGRINACRYVLQPEAQRLIQNAIRKSMVVRHFMTYELQLSQSRSLLANRYYAMVGDIGKYIEHSGMGGFFLTLKYGLGTRWPTLALAAFSGELQKLKALMLHYQSLGPMAKYMALLESPKLMDFVPSEYPLVYSYAMGIGTVLDTNMRNYAYGRSYLNPQYFQLGVETARKQQGAVDNRTAEDLGMTAADKADLTATISKLSLSQLPRGRQPISDPFAGANDRETGGQATDTPVYNFNSLNNRRYDNYDSDSEDRIDNDQDQAIRENR

GEPGQPNNQTSENQQRLN

LPVPQCTSGMSSEEFQHSMNQYIRAMHEQYRGSQDDDANDA

TDGNDISLELVGDFDSHHHHHH


(Red indicates removed residues)
Dynamic mode No
Automated mutations No
Downloads Download all the data
Simulation log
[INFO]       Logger:   Verbosity set to: 2 - [INFO]                                                (00:00:00)
[WARNING]    runJob:   Working directory already exists (possibly overwriting previous results -ow 
                       to prevent this behavior)                                                   (00:00:00)
[INFO]       runJob:   Starting aggrescan3d job on: input.pdb with all chain(s) selected           (00:00:00)
[INFO]       runJob:   Creating pdb object from: input.pdb                                         (00:00:00)
[INFO]       PDB:      Running AlphaCutter                                                         (00:00:01)
[INFO]       PDB-Info: The input structure is globular. Max score is recommended for pH analysis.  (00:00:18)
[INFO]       FoldX:    Starting FoldX energy minimization                                          (00:00:18)
[INFO]       Analysis: Starting Aggrescan4D on folded.pdb                                          (00:21:57)
[INFO]       agg3D:    Running pKa-ANI on                                                          
                       /STORAGE/DATA/lcbio/aggreskan/34449084f5320e1/tmp/folded.pdb                (00:21:57)
[INFO]       Main:     Simulation completed successfully.                                          (00:29:02)
Show buried residues

Minimal score value
-4.757
Maximal score value
2.1972
Average score
-0.8158
Total score value
-836.1685

The table below lists A4D score for protein residues. Residues with A4D score > 0.0000 are marked by yellow rows.

residue index residue name chain Aggrescan4D score mutation
1 S A -0.4557
2 S A -0.4684
3 V A -0.2866
4 L A -0.5126
5 K A -1.6445
6 T A -1.0885
7 F A -0.8676
8 E A -1.7009
9 R A -2.3638
10 F A 0.0000
11 T A -1.2779
12 I A -0.9842
13 Q A -1.5443
14 Q A -1.2369
15 E A -0.7669
16 L A -0.3539
17 Q A -1.3402
18 E A -1.3924
19 Q A -1.6841
20 S A -1.9936
21 E A -2.8164
22 D A -2.5786
23 T A 0.0000
24 P A 0.0271
25 I A 1.1587
26 P A 0.5186
27 L A -0.3127
28 E A -1.8070
29 T A 0.0000
30 I A 0.0000
31 R A -2.4311
32 P A -1.2363
33 T A -0.9171
34 I A 0.0000
35 R A -0.7706
36 V A 0.0000
37 F A 0.0000
38 V A 0.0000
39 I A 0.0000
40 N A -2.3420
41 N A -2.6927
42 N A -2.4020
43 D A -2.1039
44 P A -1.5328
45 V A -0.2384
46 V A -0.3391
47 R A 0.0000
48 S A 0.0000
49 R A -0.1493
50 L A 0.0000
51 L A 0.0000
52 F A 0.0000
53 F A 0.0000
54 N A 0.0000
55 L A 0.0000
56 R A -0.9398
57 I A 0.0000
58 I A 0.0000
59 M A 0.0000
60 S A 0.0000
61 N A -1.9370
62 T A -1.3007
63 A A 0.0000
64 R A -2.3376
65 E A -2.5462
66 G A -1.5668
67 H A -1.3418
68 R A -1.3855
69 A A 0.0000
70 G A 0.0000
71 A A 0.0000
72 L A 0.0000
73 L A 0.0000
74 S A 0.0000
75 L A 0.0000
76 L A 0.0000
77 S A 0.0000
78 L A 0.0000
79 P A -0.2532
80 S A -0.3700
81 A A -0.8126
82 A A -1.0483
83 M A 0.0000
84 S A -1.4502
85 N A -1.8195
86 H A -1.1815
87 I A 0.0000
88 K A -1.9514
89 L A -0.7796
90 A A 0.0000
91 M A -0.4577
92 H A -0.5919
93 S A 0.0000
94 P A -1.0071
95 E A -1.1711
96 A A 0.0000
97 S A -0.8687
98 I A -0.7903
99 D A -0.8185
100 R A -1.2795
101 V A 0.0000
102 E A -1.0065
103 I A 0.0000
104 T A -0.5325
105 G A 0.0000
106 F A -0.7973
107 E A -1.9713
108 N A -2.4335
109 N A -2.4881
110 S A -1.7641
111 F A -1.0472
112 R A -1.0427
113 V A 0.0000
114 I A 0.0739
115 P A -0.4392
116 D A -0.7305
117 A A -0.9147
118 R A -1.9753
119 T A -1.1999
120 S A -0.8077
121 T A -0.7940
122 M A -0.7405
123 S A -1.3265
124 R A -2.1105
125 G A -1.5252
126 E A -1.2869
127 V A 0.0000
128 L A -0.3586
129 A A -0.5611
130 F A 0.0000
131 E A -0.8096
132 A A -0.7870
133 L A -1.0932
134 A A 0.0000
135 E A -2.4793
136 D A -2.2756
137 I A 0.0000
138 P A -1.8241
139 D A -1.7139
140 E A -1.8249
141 L A -0.8093
142 K A -2.0534
143 S A -1.4601
144 T A -1.2200
145 Q A -1.8690
146 N A -2.0996
147 A A -0.9053
148 I A 0.3452
149 D A -1.9136
150 K A -2.2400
151 I A 0.1327
152 T A -0.9412
153 N A -2.2563
154 K A -2.1716
155 V A -0.3570
156 N A -0.2372
157 S A 0.5078
158 V A 2.1098
159 I A 2.1972
160 E A 0.2288
161 L A 1.0349
162 T A 0.0000
163 L A 0.0000
164 N A -1.6326
165 H A -1.7178
166 Q A -1.9875
167 T A -0.9763
168 P A 0.0000
169 F A 0.0000
170 V A 0.5868
171 N A -0.3125
172 L A -0.5697
173 Q A -1.4083
174 N A -1.9562
175 D A -2.4567
176 V A 0.0000
177 E A -1.4560
178 D A -2.2639
179 D A -0.8437
180 I A 0.6471
181 F A 0.0000
182 D A -2.2466
183 E A -2.8758
184 T A -2.5052
185 E A -2.9612
186 K A -2.3121
187 F A 0.0000
188 L A -1.2010
189 D A -1.5925
190 V A 0.0000
191 C A 0.0000
192 Y A 0.0000
193 S A 0.0000
194 V A 0.0000
195 L A 0.0000
196 M A 0.0000
197 Q A 0.0000
198 A A 0.0000
199 W A 0.0000
200 I A 0.0000
201 V A 0.0000
202 T A 0.0000
203 C A -0.2064
204 K A -0.6820
205 C A 0.0000
206 M A -0.5765
207 T A -0.6133
208 A A -1.3656
209 P A -1.4513
210 D A -2.5939
211 Q A -1.8994
212 P A -0.5565
213 P A -0.2510
214 V A 1.0307
215 S A 0.0150
216 V A -0.1666
217 A A -0.4159
218 K A -1.6235
219 R A -1.3769
220 M A 0.0000
221 A A -1.6855
222 K A -2.2698
223 Y A 0.0000
224 Q A -2.1581
225 Q A -2.5858
226 Q A -2.5998
227 G A -2.2226
228 R A -2.2765
229 I A 0.0000
230 N A -0.9556
231 A A -0.1813
232 C A 0.5233
233 R A -0.2239
234 Y A 0.0000
235 V A 0.3870
236 L A 0.0000
237 Q A 0.0000
238 P A -0.1570
239 E A -0.5357
240 A A 0.0000
241 Q A -0.5240
242 R A -0.5912
243 L A -0.0732
244 I A 0.0000
245 Q A 0.0000
246 N A -0.8599
247 A A 0.0000
248 I A 0.0000
249 R A -1.0701
250 K A -1.8263
251 S A 0.0000
252 M A 0.0000
253 V A 0.0000
254 V A 0.0000
255 R A 0.0000
256 H A 0.0000
257 F A 0.0000
258 M A 0.0000
259 T A 0.0000
260 Y A 0.3165
261 E A 0.0000
262 L A 0.0000
263 Q A -0.1724
264 L A 0.0894
265 S A -0.6518
266 Q A -1.2237
267 S A -0.8775
268 R A -1.4664
269 S A -0.0666
270 L A 1.5273
271 L A 1.4964
272 A A -0.0720
273 N A -1.5482
274 R A -2.2664
275 Y A 0.0000
276 Y A -0.7765
277 A A -0.8288
278 M A 0.0000
279 V A 0.0000
280 G A -1.2239
281 D A -1.5697
282 I A 0.0000
283 G A 0.0000
284 K A -1.9529
285 Y A -0.6903
286 I A 0.0000
287 E A 0.0000
288 H A -0.6450
289 S A -0.6590
290 G A -0.4647
291 M A 0.0000
292 G A -0.0640
293 G A 0.0000
294 F A 0.0000
295 F A 0.3686
296 L A -0.0135
297 T A 0.0000
298 L A -0.4063
299 K A -1.5463
300 Y A 0.0000
301 G A 0.0000
302 L A -0.6972
303 G A -1.3089
304 T A -1.1864
305 R A -1.7412
306 W A -0.7165
307 P A -1.0078
308 T A 0.0000
309 L A 0.0000
310 A A 0.0000
311 L A 0.0000
312 A A 0.0000
313 A A 0.0000
314 F A 0.0000
315 S A 0.0000
316 G A -0.3680
317 E A 0.0000
318 L A -0.1853
319 Q A -0.6983
320 K A -0.5936
321 L A 0.0000
322 K A -0.7095
323 A A 0.0000
324 L A 0.0000
325 M A 0.1859
326 L A 0.3595
327 H A 0.0000
328 Y A -0.2352
329 Q A -0.8890
330 S A -0.5126
331 L A 0.0000
332 G A -0.6231
333 P A -0.6554
334 M A -0.3169
335 A A 0.0000
336 K A -0.9615
337 Y A 0.0000
338 M A 0.0000
339 A A 0.0000
340 L A 0.0000
341 L A 0.0000
342 E A -0.2615
343 S A 0.0000
344 P A 0.0000
345 K A 0.0000
346 L A 0.2035
347 M A 0.2431
348 D A -0.0460
349 F A 0.0000
350 V A 0.1500
351 P A 0.0000
352 S A -0.7756
353 E A -0.5795
354 Y A 0.0000
355 P A 0.0000
356 L A 0.0000
357 V A 0.0000
358 Y A 0.0000
359 S A 0.0000
360 Y A 0.0000
361 A A 0.0000
362 M A 0.0000
363 G A 0.0000
364 I A 0.0000
365 G A 0.0000
366 T A 0.0000
367 V A -0.0849
368 L A 0.0668
369 D A -0.7296
370 T A -1.2487
371 N A -2.0700
372 M A 0.0000
373 R A -2.1064
374 N A -2.1589
375 Y A -0.9985
376 A A -0.3594
377 Y A -0.0854
378 G A -0.4323
379 R A -1.2424
380 S A -1.0387
381 Y A -0.5636
382 L A 0.0000
383 N A 0.0000
384 P A -0.1539
385 Q A -0.6745
386 Y A 0.0000
387 F A 0.0000
388 Q A -0.7570
389 L A 0.0000
390 G A 0.0000
391 V A -0.5654
392 E A -1.2562
393 T A 0.0000
394 A A 0.0000
395 R A -2.4026
396 K A -2.5956
397 Q A -1.6903
398 Q A -1.2304
399 G A 0.0000
400 A A -0.8769
401 V A -1.3632
402 D A -2.5390
403 N A -3.0121
404 R A -3.6300
405 T A -2.4770
406 A A 0.0000
407 E A -3.4471
408 D A -2.8101
409 L A -0.6564
410 G A -1.3621
411 M A -1.0975
412 T A -0.7961
413 A A -0.7987
414 A A -0.8652
415 D A -1.5301
416 K A -1.3089
417 A A -1.0277
418 D A -1.8883
419 L A -0.8493
420 T A -0.8601
421 A A -0.8557
422 T A -0.3122
423 I A -0.1901
424 S A -0.6149
425 K A -0.4290
426 L A 0.8047
427 S A 0.2115
428 L A 1.3435
429 S A 0.4052
430 Q A -0.5778
431 L A 0.3407
432 P A -1.2853
433 R A -2.6850
434 G A -2.4987
435 R A -2.7694
436 Q A -2.1631
437 P A -0.8041
438 I A 0.3797
439 S A -0.0939
440 D A -0.0869
441 P A 0.4990
442 F A 1.2928
443 A A 0.0072
444 G A -0.7789
445 A A -1.4665
446 N A -3.0197
447 D A -3.8828
448 R A -3.8862
449 E A -3.4374
512 L A 1.5892
513 P A 0.5536
514 V A 0.4577
515 P A -0.2934
516 Q A -1.5251
517 C A 0.0000
518 T A -0.8153
519 S A -0.7760
520 G A -0.6744
521 M A -1.0227
522 S A -1.3924
523 S A -2.0124
524 E A -3.2230
525 E A -3.2314
526 F A 0.0000
527 Q A -2.3928
528 H A -2.7663
529 S A -2.2089
530 M A 0.0000
531 N A -2.1943
532 Q A -2.6382
533 Y A -1.3569
534 I A 0.0000
535 R A -3.3608
536 A A -2.5192
537 M A 0.0000
538 H A -2.6876
539 E A -3.9161
540 Q A -3.0323
541 Y A -2.0746
542 R A -3.7454
543 G A -3.5249
544 S A -2.5107
545 Q A -3.1557
546 D A -3.4072
547 D A -3.7268
548 D A -3.1829
549 A A -2.3549
550 N A -3.1820
551 D A -3.2135
552 A A -1.7896
553 T A -0.8263
1 S B 0.0092
2 S B 0.6045
3 V B 1.9420
4 L B 1.4730
5 K B -0.6666
6 T B 0.1541
7 F B 0.7186
8 E B -0.7130
9 R B -1.3832
10 F B 0.3383
11 T B 0.0000
12 I B -0.8420
13 Q B -1.9858
14 Q B -2.2786
15 E B -1.8156
16 L B -1.6369
17 Q B -2.9227
18 E B -3.5134
19 Q B -2.7234
20 S B -2.8559
21 E B -3.0900
22 D B -2.7478
23 T B -1.6851
24 P B 0.1139
25 I B 1.3443
26 P B 0.8774
27 L B 1.2213
28 E B -0.8744
29 T B -0.3631
30 I B 0.4950
31 R B -1.6503
32 P B -1.0012
33 T B -0.9553
34 I B 0.0000
35 R B -1.0548
36 V B 0.0000
37 F B 0.0000
38 V B 0.0000
39 I B 0.0000
40 N B -2.3012
41 N B -2.6011
42 N B -2.3628
43 D B -1.9303
44 P B -1.1518
45 V B -0.2410
46 V B 0.0000
47 R B 0.0000
48 S B 0.0000
49 R B -0.6868
50 L B 0.0000
51 L B 0.0000
52 F B 0.0000
53 F B 0.0000
54 N B 0.0000
55 L B 0.0000
56 R B -0.9649
57 I B 0.0000
58 I B 0.0000
59 M B 0.0000
60 S B 0.0000
61 N B -2.0165
62 T B -1.5108
63 A B 0.0000
64 R B -3.1577
65 E B -3.3975
66 G B -2.2545
67 H B -1.8218
68 R B -1.8932
69 A B 0.0000
70 G B 0.0000
71 A B 0.0000
72 L B 0.0000
73 L B 0.0000
74 S B 0.0000
75 L B 0.0000
76 L B 0.0000
77 S B 0.0000
78 L B 0.0000
79 P B 0.0000
80 S B 0.0000
81 A B -1.4852
82 A B -1.1266
83 M B 0.0000
84 S B -1.1827
85 N B -1.0508
86 H B 0.0000
87 I B 0.0000
88 K B -1.4763
89 L B -0.6127
90 A B 0.0000
91 M B -0.6761
92 H B -1.1557
93 S B 0.0000
94 P B -1.3009
95 E B -1.7384
96 A B 0.0000
97 S B -1.0446
98 I B 0.0000
99 D B -1.2262
100 R B -1.8581
101 V B 0.0000
102 E B -1.2280
103 I B 0.0000
104 T B -0.5277
105 G B 0.0000
106 F B -0.8682
107 E B -1.8337
108 N B -2.3597
109 N B -2.4918
110 S B -1.7557
111 F B -1.0597
112 R B -0.9228
113 V B 0.0000
114 I B 0.1255
115 P B -0.4396
116 D B -0.7579
117 A B -0.9374
118 R B -1.9870
119 T B -1.2853
120 S B -0.9127
121 T B -0.9155
122 M B -0.7371
123 S B -1.3122
124 R B -2.0903
125 G B -1.4978
126 E B -1.2382
127 V B 0.0000
128 L B -0.3548
129 A B -0.3723
130 F B 0.0000
131 E B -0.7935
132 A B -0.7605
133 L B -1.1637
134 A B 0.0000
135 E B -2.4749
136 D B -2.2258
137 I B 0.0000
138 P B -2.0275
139 D B -2.0022
140 E B -2.3617
141 L B -0.9839
142 K B -2.2209
143 S B -2.1284
144 T B -1.3929
145 Q B -2.1995
146 N B -2.1828
147 A B -0.9413
148 I B 0.4205
149 D B -1.9522
150 K B -2.2209
151 I B 0.4511
152 T B -0.7316
153 N B -2.1104
154 K B -1.5348
155 V B 0.5437
156 N B -0.2149
157 S B 0.5193
158 V B 1.9871
159 I B 1.9166
160 E B -0.2091
161 L B 0.1513
162 T B -1.1514
163 L B 0.0000
164 N B -1.5013
165 H B -1.8095
166 Q B -2.0094
167 T B -1.0531
168 P B 0.0000
169 F B 0.0000
170 V B 0.5606
171 N B -0.4652
172 L B -0.7626
173 Q B -1.4921
174 N B -2.0541
175 D B -2.8232
176 V B 0.0000
177 E B -1.7312
178 D B -2.4612
179 D B -0.9170
180 I B 0.7473
181 F B 0.0000
182 D B -1.5578
183 E B -1.4425
184 T B -1.5801
185 E B -1.9685
186 K B -1.4817
187 F B 0.0000
188 L B -0.6932
189 D B -1.1347
190 V B 0.0000
191 C B 0.0000
192 Y B 0.0000
193 S B 0.0000
194 V B 0.0000
195 L B 0.0000
196 M B 0.0000
197 Q B 0.0000
198 A B 0.0000
199 W B 0.0000
200 I B 0.0000
201 V B 0.0000
202 T B 0.0000
203 C B 0.0000
204 K B 0.0000
205 C B 0.0000
206 M B -0.5686
207 T B -0.6243
208 A B -1.2020
209 P B -1.2664
210 D B -1.9737
211 Q B -1.2519
212 P B -0.2728
213 P B 0.1186
214 V B 1.2888
215 S B 0.2109
216 V B 0.2594
217 A B 0.0616
218 K B -0.8441
219 R B 0.0000
220 M B 0.0000
221 A B -0.8258
222 K B -1.1628
223 Y B 0.0000
224 Q B -1.2066
225 Q B -1.3792
226 Q B -1.3856
227 G B -1.4799
228 R B 0.0000
229 I B 0.0000
230 N B -0.7342
231 A B -0.1062
232 C B 0.4007
233 R B -0.4572
234 Y B 0.0000
235 V B 0.3361
236 L B 0.0000
237 Q B 0.0000
238 P B -0.2042
239 E B -0.7341
240 A B 0.0000
241 Q B -0.6156
242 R B -0.9309
243 L B -0.4179
244 I B 0.0000
245 Q B -0.9910
246 N B -1.5183
247 A B 0.0000
248 I B 0.0000
249 R B -1.7396
250 K B -2.5079
251 S B 0.0000
252 M B -0.8937
253 V B 0.0000
254 V B 0.0000
255 R B 0.0000
256 H B -0.2574
257 F B 0.0000
258 M B 0.0000
259 T B 0.0000
260 Y B 0.2702
261 E B 0.0000
262 L B 0.0000
263 Q B -0.0993
264 L B 0.0000
265 S B 0.0000
266 Q B -0.5431
267 S B 0.0000
268 R B -1.2713
269 S B -0.1646
270 L B 0.0000
271 L B -0.1448
272 A B -0.2600
273 N B 0.0000
274 R B -0.6481
275 Y B 0.0000
276 Y B 0.0000
277 A B 0.0000
278 M B 0.0000
279 V B 0.0000
280 G B 0.0000
281 D B 0.0000
282 I B 0.0000
283 G B 0.0000
284 K B 0.0000
285 Y B -0.2685
286 I B 0.0000
287 E B 0.0000
288 H B -0.3114
289 S B -0.4116
290 G B -0.3846
291 M B 0.0000
292 G B -0.0968
293 G B 0.0000
294 F B 0.0000
295 F B 0.1245
296 L B 0.0000
297 T B 0.0000
298 L B 0.0000
299 K B -0.3269
300 Y B 0.0000
301 G B 0.0000
302 L B 0.0000
303 G B 0.0000
304 T B 0.0000
305 R B -0.5374
306 W B 0.0000
307 P B -0.2048
308 T B 0.1466
309 L B 0.2579
310 A B 0.3638
311 L B 0.7375
312 A B 0.3760
313 A B 0.2731
314 F B 0.0000
315 S B 0.0563
316 G B -0.1810
317 E B -0.5790
318 L B -0.1824
319 Q B -0.4048
320 K B -0.8896
321 L B 0.0000
322 K B 0.0000
323 A B 0.0000
324 L B 0.0000
325 M B 0.0000
326 L B 0.1395
327 H B 0.0000
328 Y B 0.0000
329 Q B -0.7341
330 S B -0.6445
331 L B -0.4022
332 G B -0.4584
333 P B -0.4298
334 M B 0.1217
335 A B 0.0000
336 K B -0.3858
337 Y B 0.0000
338 M B 0.0000
339 A B 0.0000
340 L B 0.0000
341 L B -0.7537
342 E B -1.6992
343 S B -0.9895
344 P B -0.7089
345 K B -0.8091
346 L B -0.1966
347 M B 0.2040
348 D B -0.7233
349 F B 0.0000
350 V B 0.0785
351 P B 0.0000
352 S B -0.5996
353 E B -1.2644
354 Y B 0.0000
355 P B -0.3581
356 L B -0.2005
357 V B 0.0000
358 Y B 0.0000
359 S B 0.0000
360 Y B 0.0000
361 A B 0.0000
362 M B 0.0000
363 G B 0.0000
364 I B 0.0000
365 G B 0.0000
366 T B 0.0000
367 V B -0.4265
368 L B 0.0000
369 D B -0.6149
370 T B -0.9125
371 N B -1.5253
372 M B 0.0000
373 R B -1.9926
374 N B -2.1742
375 Y B 0.0000
376 A B -0.8520
377 Y B -0.0987
378 G B -0.3546
379 R B -0.3275
380 S B -0.1414
381 Y B -0.2400
382 L B 0.0000
383 N B -0.8273
384 P B -0.9205
385 Q B -1.4477
386 Y B -0.7947
387 F B 0.0000
388 Q B -1.3985
389 L B -0.8412
390 G B 0.0000
391 V B 0.0000
392 E B -2.1143
393 T B 0.0000
394 A B 0.0000
395 R B -2.6661
396 K B -2.8748
397 Q B -1.7589
398 Q B -1.4021
399 G B 0.0000
400 A B -0.8151
401 V B -0.8967
402 D B -1.8989
403 N B -3.0715
404 R B -3.5698
405 T B -2.6908
406 A B 0.0000
407 E B -3.6819
408 D B -3.2714
409 L B -2.4744
410 G B -2.4490
411 M B -1.5068
412 T B -0.7245
413 A B -0.4629
414 A B -0.6876
415 D B -1.2096
416 K B -1.2389
417 A B -1.0004
418 D B -1.8693
419 L B 0.0000
420 T B -1.1446
421 A B -1.0630
422 T B -1.0390
423 I B 0.0000
424 S B -1.1229
425 K B -1.1117
426 L B 0.0000
427 S B -0.2103
428 L B 1.1781
429 S B 0.3682
430 Q B -0.0839
431 L B 0.7017
432 P B -0.7958
433 R B -2.5661
434 G B -2.5271
435 R B -2.9850
436 Q B -2.5339
437 P B -1.4629
438 I B -0.7543
439 S B -0.8103
440 D B -0.7479
441 P B -0.1036
442 F B 0.3857
443 A B -0.5720
444 G B -1.0222
445 A B -1.6171
446 N B -3.0558
447 D B -3.9640
448 R B -3.9948
449 E B -3.7406
450 T B -2.3584
451 G B -1.8397
452 G B -1.5093
453 Q B -1.8158
454 A B -1.2594
455 T B -1.4082
456 D B -1.7579
457 T B -0.4309
458 P B 0.1581
459 V B 1.8191
460 Y B 1.9077
461 N B 0.4607
462 F B 1.4507
463 N B -1.0127
464 S B -1.7136
465 L B -1.8510
466 N B -3.1329
467 N B -2.9377
468 R B -3.1485
469 R B -3.1624
470 Y B -1.3891
471 D B -3.1463
472 N B -2.8189
473 Y B -1.9361
474 D B -2.9048
475 S B -2.0368
476 D B -3.0178
477 S B -1.9211
478 E B -1.9999
479 D B -2.4003
480 R B -1.4199
481 I B -0.5826
482 D B -1.1604
483 N B -1.3129
484 D B 0.0000
485 Q B -1.6930
486 D B -1.7176
487 Q B -2.0381
488 A B -1.8913
489 I B -1.5012
490 R B -3.3948
491 E B -3.7295
492 N B -3.2821
493 R B -3.3033
512 L B 1.5915
513 P B 0.5042
514 V B 0.3322
515 P B -0.4410
516 Q B -1.3467
517 C B -1.1680
518 T B -0.7320
519 S B -0.7184
520 G B -0.6581
521 M B -1.0011
522 S B -1.3745
523 S B -1.9696
524 E B -3.2390
525 E B -3.1388
526 F B 0.0000
527 Q B -2.2640
528 H B -2.6803
529 S B -1.9802
530 M B 0.0000
531 N B -1.7161
532 Q B -2.0716
533 Y B -0.9995
534 I B 0.0000
535 R B -2.7858
536 A B -1.9521
537 M B -1.5595
538 H B -2.3683
539 E B -3.4873
540 Q B -2.7139
541 Y B -1.5652
542 R B -3.7541
543 G B -3.5997
544 S B -2.8740
545 Q B -3.7003
546 D B -4.4634
547 D B -4.7570
548 D B -4.1427
549 A B -3.0537
550 N B -3.2147
551 D B -2.9913
552 A B -1.5447
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Calculations for various pH values

This page contains details and comparisons for all models calculated at different pH points.
Please find suggestions on interpreting the results below. More details can be found in the Tutorial.
The input structure is globular. Max score is recommended for pH analysis.

pH
Average A4D Score
Max A4D Score
4.0 -0.5331 5.04 View CSV PDB
4.5 -0.6042 4.9109 View CSV PDB
5.0 -0.6911 4.7488 View CSV PDB
5.5 -0.7803 4.6555 View CSV PDB
6.0 -0.8594 4.5588 View CSV PDB
6.5 -0.9196 4.461 View CSV PDB
7.0 -0.9595 4.3631 View CSV PDB
7.5 -0.9844 4.2656 View CSV PDB
8.0 -0.9997 4.17 View CSV PDB
8.5 -1.0062 4.152 View CSV PDB
9.0 -1.0011 4.1512 View CSV PDB