Chain sequence(s) |
A: EVRLVESGGGLVQPGGSLRLSCAASGFTFSTSWMSWVRQGPGNGLEWVANIKEDGSQKYYVDSVKGRFTISRDNPKNSLFLQMNRLRVEDTAVYFCVRERTESFHEFWNGQYVHAGYHFYGMDVWGQGTTVTVAS
B: LVLTQSPATLSLSPGDRATLSCRASESVTTYVAWYQQKPGQAPRLLIYDVSNRATGIPARFSGGGSGTDFTLTISSLEPEDFAVYYCQQRGNWPPDFTFGPGTKVDIK input PDB |
Selected Chain(s) | A,B |
Distance of aggregation | 10 Å |
FoldX usage | Yes |
pH calculations | No |
alphaCutter usage | No |
Dynamic mode | No |
Automated mutations | No |
Downloads | Download all the data |
Simulation log |
[INFO] Logger: Verbosity set to: 2 - [INFO] (00:00:00) [WARNING] runJob: Working directory already exists (possibly overwriting previous results -ow to prevent this behavior) (00:00:00) [INFO] runJob: Starting aggrescan3d job on: input.pdb with all chain(s) selected (00:00:00) [INFO] runJob: Creating pdb object from: input.pdb (00:00:00) [INFO] FoldX: Starting FoldX energy minimization (00:00:00) [INFO] Analysis: Starting Aggrescan4D on folded.pdb (00:01:26) [INFO] Main: Simulation completed successfully. (00:01:28) |
The table below lists A4D score for protein residues. Residues with A4D score > 0.0000 are marked by yellow rows.
residue index | residue name | chain | Aggrescan4D score | mutation |
---|---|---|---|---|
1 | E | A | -1.9469 | |
2 | V | A | -0.9036 | |
3 | R | A | -1.7021 | |
4 | L | A | 0.0000 | |
5 | V | A | -0.1445 | |
6 | E | A | 0.0000 | |
7 | S | A | -0.6068 | |
8 | G | A | -0.9021 | |
9 | G | A | -0.3195 | |
10 | G | A | 0.3119 | |
11 | L | A | 1.2478 | |
12 | V | A | 0.2522 | |
13 | Q | A | -1.1400 | |
14 | P | A | -1.3812 | |
15 | G | A | -1.7930 | |
16 | G | A | -1.3298 | |
17 | S | A | -1.4773 | |
18 | L | A | -0.8831 | |
19 | R | A | -1.6799 | |
20 | L | A | 0.0000 | |
21 | S | A | -0.4361 | |
22 | C | A | 0.0000 | |
23 | A | A | -0.4543 | |
24 | A | A | 0.0000 | |
25 | S | A | -0.9936 | |
26 | G | A | -1.0522 | |
27 | F | A | -0.3741 | |
28 | T | A | -0.0848 | |
29 | F | A | 0.0000 | |
30 | S | A | -1.1589 | |
31 | T | A | -0.9278 | |
32 | S | A | 0.0000 | |
33 | W | A | 0.0000 | |
34 | M | A | 0.0000 | |
35 | S | A | 0.0000 | |
36 | W | A | 0.0000 | |
37 | V | A | 0.0000 | |
38 | R | A | 0.0000 | |
39 | Q | A | -0.7303 | |
40 | G | A | -1.1958 | |
41 | P | A | -1.1125 | |
42 | G | A | -1.2795 | |
43 | N | A | -1.8493 | |
44 | G | A | -1.1460 | |
45 | L | A | 0.0000 | |
46 | E | A | -0.8936 | |
47 | W | A | 0.0000 | |
48 | V | A | 0.0000 | |
49 | A | A | 0.0000 | |
50 | N | A | 0.0000 | |
51 | I | A | 0.0000 | |
52 | K | A | -1.5929 | |
53 | E | A | -1.7684 | |
54 | D | A | -2.3633 | |
55 | G | A | -1.6905 | |
56 | S | A | -1.2698 | |
57 | Q | A | -1.2305 | |
58 | K | A | -1.0161 | |
59 | Y | A | -0.7534 | |
60 | Y | A | -0.9173 | |
61 | V | A | -1.1070 | |
62 | D | A | -2.2956 | |
63 | S | A | -1.6504 | |
64 | V | A | 0.0000 | |
65 | K | A | -2.4402 | |
66 | G | A | -1.8137 | |
67 | R | A | 0.0000 | |
68 | F | A | 0.0000 | |
69 | T | A | -0.8337 | |
70 | I | A | 0.0000 | |
71 | S | A | -0.4692 | |
72 | R | A | -1.1751 | |
73 | D | A | -1.5860 | |
74 | N | A | -1.7695 | |
75 | P | A | -1.4872 | |
76 | K | A | -2.2664 | |
77 | N | A | -1.5190 | |
78 | S | A | -0.9830 | |
79 | L | A | 0.0000 | |
80 | F | A | -0.3834 | |
81 | L | A | 0.0000 | |
82 | Q | A | -1.0947 | |
83 | M | A | 0.0000 | |
84 | N | A | -2.0588 | |
85 | R | A | -2.6606 | |
86 | L | A | 0.0000 | |
87 | R | A | -1.7260 | |
88 | V | A | 0.0504 | |
89 | E | A | -1.4099 | |
90 | D | A | 0.0000 | |
91 | T | A | -0.1088 | |
92 | A | A | 0.0000 | |
93 | V | A | 0.1400 | |
94 | Y | A | 0.0000 | |
95 | F | A | 0.0000 | |
96 | C | A | 0.0000 | |
97 | V | A | 0.0000 | |
98 | R | A | -0.6348 | |
99 | E | A | 0.0000 | |
100 | R | A | -1.1498 | |
101 | T | A | 0.0000 | |
102 | E | A | -2.0108 | |
103 | S | A | -1.0500 | |
104 | F | A | -0.6490 | |
105 | H | A | -0.3585 | |
106 | E | A | 0.3183 | |
107 | F | A | 1.8077 | |
108 | W | A | 1.3152 | |
109 | N | A | -0.5119 | |
110 | G | A | -0.3585 | |
111 | Q | A | -0.0513 | |
112 | Y | A | 1.4167 | |
113 | V | A | 1.8019 | |
114 | H | A | 0.3741 | |
115 | A | A | -0.0708 | |
116 | G | A | -0.7629 | |
117 | Y | A | 0.0000 | |
118 | H | A | -1.0500 | |
119 | F | A | 0.0000 | |
120 | Y | A | -0.5735 | |
121 | G | A | 0.0000 | |
122 | M | A | 0.0000 | |
123 | D | A | -0.8237 | |
124 | V | A | -0.6426 | |
125 | W | A | -0.7215 | |
126 | G | A | 0.0000 | |
127 | Q | A | -1.5132 | |
128 | G | A | -0.6957 | |
129 | T | A | -0.3122 | |
130 | T | A | 0.1289 | |
131 | V | A | 0.0000 | |
132 | T | A | 0.3177 | |
133 | V | A | 0.0000 | |
134 | A | A | -0.1000 | |
135 | S | A | -0.2693 | |
1 | L | B | 1.3421 | |
2 | V | B | 1.5765 | |
3 | L | B | 0.0000 | |
4 | T | B | -0.5475 | |
5 | Q | B | 0.0000 | |
6 | S | B | -0.6934 | |
7 | P | B | -0.3421 | |
8 | A | B | -0.3193 | |
9 | T | B | -0.4396 | |
10 | L | B | -0.1299 | |
11 | S | B | -0.3274 | |
12 | L | B | -0.4899 | |
13 | S | B | -0.8196 | |
14 | P | B | -1.3157 | |
15 | G | B | -1.6472 | |
16 | D | B | -2.0049 | |
17 | R | B | -2.5205 | |
18 | A | B | 0.0000 | |
19 | T | B | -0.6078 | |
20 | L | B | 0.0000 | |
21 | S | B | -0.9159 | |
22 | C | B | 0.0000 | |
23 | R | B | -2.4498 | |
24 | A | B | 0.0000 | |
25 | S | B | -0.8199 | |
26 | E | B | -1.8351 | |
27 | S | B | -1.4983 | |
28 | V | B | 0.0000 | |
29 | T | B | -0.6325 | |
30 | T | B | -0.4660 | |
31 | Y | B | 0.0000 | |
32 | V | B | 0.0000 | |
33 | A | B | 0.0000 | |
34 | W | B | 0.0000 | |
35 | Y | B | 0.0000 | |
36 | Q | B | 0.0000 | |
37 | Q | B | -1.1544 | |
38 | K | B | -1.6248 | |
39 | P | B | -1.1189 | |
40 | G | B | -1.5028 | |
41 | Q | B | -2.1523 | |
42 | A | B | -1.4391 | |
43 | P | B | 0.0000 | |
44 | R | B | -1.6336 | |
45 | L | B | 0.0000 | |
46 | L | B | 0.0000 | |
47 | I | B | 0.0000 | |
48 | Y | B | -0.6440 | |
49 | D | B | -0.7781 | |
50 | V | B | -0.6739 | |
51 | S | B | -1.1507 | |
52 | N | B | -1.7292 | |
53 | R | B | -1.7341 | |
54 | A | B | -1.1500 | |
55 | T | B | -0.7372 | |
56 | G | B | -0.6730 | |
57 | I | B | 0.0000 | |
58 | P | B | -0.4455 | |
59 | A | B | -0.4002 | |
60 | R | B | -0.8467 | |
61 | F | B | 0.0000 | |
62 | S | B | -0.7200 | |
63 | G | B | -0.7521 | |
64 | G | B | -0.8238 | |
65 | G | B | -1.1917 | |
66 | S | B | -1.0594 | |
67 | G | B | -1.3291 | |
68 | T | B | -1.9254 | |
69 | D | B | -2.2470 | |
70 | F | B | 0.0000 | |
71 | T | B | -0.7938 | |
72 | L | B | 0.0000 | |
73 | T | B | -0.6109 | |
74 | I | B | 0.0000 | |
75 | S | B | -1.3918 | |
76 | S | B | -1.6681 | |
77 | L | B | 0.0000 | |
78 | E | B | -2.0647 | |
79 | P | B | -1.2578 | |
80 | E | B | -2.0107 | |
81 | D | B | 0.0000 | |
82 | F | B | -0.3956 | |
83 | A | B | 0.0000 | |
84 | V | B | -0.3688 | |
85 | Y | B | 0.0000 | |
86 | Y | B | 0.0000 | |
87 | C | B | 0.0000 | |
88 | Q | B | 0.0000 | |
89 | Q | B | 0.0000 | |
90 | R | B | 0.0000 | |
91 | G | B | -0.3830 | |
92 | N | B | -0.9113 | |
93 | W | B | 0.3612 | |
94 | P | B | -0.0156 | |
95 | P | B | 0.0000 | |
96 | D | B | -0.4304 | |
97 | F | B | 0.0000 | |
98 | T | B | 0.3219 | |
99 | F | B | 0.0000 | |
100 | G | B | 0.0000 | |
101 | P | B | -0.5322 | |
102 | G | B | -0.5808 | |
103 | T | B | 0.0000 | |
104 | K | B | -0.8614 | |
105 | V | B | 0.0000 | |
106 | D | B | -0.0439 | |
107 | I | B | 0.8586 | |
108 | K | B | -0.8334 |