| Chain sequence(s) |
A: MWIKWIATLVAFGALVQSAVACPSQCSCSGTEVNCGNKGLASVPPGIPTTTEKLVLFSNQITKLEPGVFDSLTQLTILALNDNQLQALSEGLFDRLGKLQHLDLSKNQLKSIPRGAFDNLKSLTHIWLFGNPW
input PDB |
| Selected Chain(s) | A |
| Distance of aggregation | 10 Å |
| FoldX usage | No |
| pH calculations | No |
| alphaCutter usage | No |
| Dynamic mode | No |
| Automated mutations | No |
| Downloads | Download all the data |
| Simulation log |
[INFO] Logger: Verbosity set to: 2 - [INFO] (00:00:02)
[WARNING] runJob: Working directory already exists (possibly overwriting previous results -ow
to prevent this behavior) (00:00:02)
[INFO] runJob: Starting aggrescan3d job on: input.pdb with A chain(s) selected (00:00:02)
[INFO] runJob: Creating pdb object from: input.pdb (00:00:02)
[INFO] runJob: FoldX not utilized. Treating input pdb file as it was already optimized. (00:00:02)
[INFO] Analysis: Starting Aggrescan4D on folded.pdb (00:00:02)
[INFO] Main: Simulation completed successfully. (00:00:03)
|
The table below lists A4D score for protein residues. Residues with A4D score > 0.0000 are marked by yellow rows.
| residue index | residue name | chain | Aggrescan4D score | mutation |
|---|---|---|---|---|
| 1 | M | A | 1.8760 | |
| 2 | W | A | 2.3543 | |
| 3 | I | A | 2.5230 | |
| 4 | K | A | 0.7819 | |
| 5 | W | A | 1.9955 | |
| 6 | I | A | 2.5734 | |
| 7 | A | A | 1.7562 | |
| 8 | T | A | 1.8856 | |
| 9 | L | A | 2.8951 | |
| 10 | V | A | 3.0144 | |
| 11 | A | A | 2.1630 | |
| 12 | F | A | 2.6574 | |
| 13 | G | A | 1.4456 | |
| 14 | A | A | 1.5006 | |
| 15 | L | A | 2.1750 | |
| 16 | V | A | 1.8396 | |
| 17 | Q | A | 0.3107 | |
| 18 | S | A | 0.4559 | |
| 19 | A | A | 0.7913 | |
| 20 | V | A | 1.6522 | |
| 21 | A | A | 0.9891 | |
| 22 | C | A | 0.4269 | |
| 23 | P | A | 0.0000 | |
| 24 | S | A | -0.6030 | |
| 25 | Q | A | -1.3349 | |
| 26 | C | A | -0.8663 | |
| 27 | S | A | -0.4305 | |
| 28 | C | A | -0.0150 | |
| 29 | S | A | -0.5869 | |
| 30 | G | A | -0.8515 | |
| 31 | T | A | -1.0884 | |
| 32 | E | A | -1.1346 | |
| 33 | V | A | 0.0000 | |
| 34 | N | A | -0.9664 | |
| 35 | C | A | 0.0000 | |
| 36 | G | A | 0.0000 | |
| 37 | N | A | -2.2605 | |
| 38 | K | A | -2.6080 | |
| 39 | G | A | -1.8311 | |
| 40 | L | A | -1.1893 | |
| 41 | A | A | -1.0178 | |
| 42 | S | A | -0.8985 | |
| 43 | V | A | -0.3250 | |
| 44 | P | A | 0.0000 | |
| 45 | P | A | -0.4242 | |
| 46 | G | A | -0.2200 | |
| 47 | I | A | 0.2241 | |
| 48 | P | A | 0.1324 | |
| 49 | T | A | -0.3608 | |
| 50 | T | A | -0.4851 | |
| 51 | T | A | 0.0000 | |
| 52 | E | A | -1.7235 | |
| 53 | K | A | -1.2196 | |
| 54 | L | A | 0.0000 | |
| 55 | V | A | 0.0000 | |
| 56 | L | A | 0.0000 | |
| 57 | F | A | -0.6731 | |
| 58 | S | A | -1.5169 | |
| 59 | N | A | 0.0000 | |
| 60 | Q | A | -2.1471 | |
| 61 | I | A | 0.0000 | |
| 62 | T | A | -1.9112 | |
| 63 | K | A | -2.6905 | |
| 64 | L | A | 0.0000 | |
| 65 | E | A | -2.1620 | |
| 66 | P | A | -1.7517 | |
| 67 | G | A | -1.6045 | |
| 68 | V | A | -0.5872 | |
| 69 | F | A | 0.0000 | |
| 70 | D | A | -1.9416 | |
| 71 | S | A | -1.0701 | |
| 72 | L | A | 0.0000 | |
| 73 | T | A | -1.6898 | |
| 74 | Q | A | -1.5295 | |
| 75 | L | A | 0.0000 | |
| 76 | T | A | -1.0750 | |
| 77 | I | A | -0.5416 | |
| 78 | L | A | 0.0000 | |
| 79 | A | A | -0.0551 | |
| 80 | L | A | 0.0000 | |
| 81 | N | A | -0.8464 | |
| 82 | D | A | -2.2606 | |
| 83 | N | A | 0.0000 | |
| 84 | Q | A | -2.4980 | |
| 85 | L | A | 0.0000 | |
| 86 | Q | A | -2.5517 | |
| 87 | A | A | -1.6630 | |
| 88 | L | A | 0.0000 | |
| 89 | S | A | -1.5558 | |
| 90 | E | A | -2.3902 | |
| 91 | G | A | -2.2542 | |
| 92 | L | A | 0.0000 | |
| 93 | F | A | 0.0000 | |
| 94 | D | A | -3.1238 | |
| 95 | R | A | -3.1951 | |
| 96 | L | A | 0.0000 | |
| 97 | G | A | -2.5867 | |
| 98 | K | A | -2.4500 | |
| 99 | L | A | 0.0000 | |
| 100 | Q | A | -1.2605 | |
| 101 | H | A | -0.6058 | |
| 102 | L | A | 0.0000 | |
| 103 | D | A | 0.0493 | |
| 104 | L | A | 0.0000 | |
| 105 | S | A | 0.0000 | |
| 106 | K | A | -2.0407 | |
| 107 | N | A | 0.0000 | |
| 108 | Q | A | -2.5905 | |
| 109 | L | A | 0.0000 | |
| 110 | K | A | -1.8037 | |
| 111 | S | A | -1.0155 | |
| 112 | I | A | -0.3950 | |
| 113 | P | A | -1.2075 | |
| 114 | R | A | -2.3350 | |
| 115 | G | A | -2.1033 | |
| 116 | A | A | 0.0000 | |
| 117 | F | A | -1.5008 | |
| 118 | D | A | -2.7607 | |
| 119 | N | A | -2.8339 | |
| 120 | L | A | 0.0000 | |
| 121 | K | A | -2.6861 | |
| 122 | S | A | -1.6860 | |
| 123 | L | A | -1.1254 | |
| 124 | T | A | -0.6770 | |
| 125 | H | A | -0.5002 | |
| 126 | I | A | 0.7397 | |
| 127 | W | A | 0.9576 | |
| 128 | L | A | 1.3590 | |
| 129 | F | A | 1.7199 | |
| 130 | G | A | -0.3257 | |
| 131 | N | A | -0.9851 | |
| 132 | P | A | -0.7189 | |
| 133 | W | A | 0.4808 |