Chain sequence(s) |
A: MQGGKKAGESIKETATNIGASAKAGMEKTKATVQEKAERMTARDPVQKELATQKKEAKMNQAELDKQAARQHNTAAKQSATTAGHMGHGHHTTGTGTGTATYSTTGEYGQPMGAHQTSAMPGHGTGQPTGHVTEGVVGSHPIGTNRGPGGTATAHNTRAGGKPNDYGYGTGGT
input PDB |
Selected Chain(s) | A |
Distance of aggregation | 10 Å |
FoldX usage | No |
pH calculations | No |
alphaCutter usage | No |
Dynamic mode | No |
Automated mutations | No |
Downloads | Download all the data |
Simulation log |
[INFO] Logger: Verbosity set to: 2 - [INFO] (00:00:00) [WARNING] runJob: Working directory already exists (possibly overwriting previous results -ow to prevent this behavior) (00:00:00) [INFO] runJob: Starting aggrescan3d job on: input.pdb with A chain(s) selected (00:00:00) [INFO] runJob: Creating pdb object from: input.pdb (00:00:00) [INFO] runJob: FoldX not utilized. Treating input pdb file as it was already optimized. (00:00:01) [INFO] Analysis: Starting Aggrescan4D on folded.pdb (00:00:01) [INFO] Main: Simulation completed successfully. (00:00:02) |
The table below lists A4D score for protein residues. Residues with A4D score > 0.0000 are marked by yellow rows.
residue index | residue name | chain | Aggrescan4D score | mutation |
---|---|---|---|---|
1 | M | A | 0.0921 | |
2 | Q | A | -1.6668 | |
3 | G | A | -1.8584 | |
4 | G | A | -2.2097 | |
5 | K | A | -3.5068 | |
6 | K | A | -3.3874 | |
7 | A | A | -2.0565 | |
8 | G | A | -2.4685 | |
9 | E | A | -3.3216 | |
10 | S | A | -1.9370 | |
11 | I | A | -0.3900 | |
12 | K | A | -2.5271 | |
13 | E | A | -2.6524 | |
14 | T | A | -1.0631 | |
15 | A | A | -0.4990 | |
16 | T | A | -0.8990 | |
17 | N | A | -1.1417 | |
18 | I | A | 0.6792 | |
19 | G | A | -0.3311 | |
20 | A | A | -0.6475 | |
21 | S | A | -0.5755 | |
22 | A | A | -0.8832 | |
23 | K | A | -1.9941 | |
24 | A | A | -1.7390 | |
25 | G | A | -1.7211 | |
26 | M | A | -1.5215 | |
27 | E | A | -3.1022 | |
28 | K | A | -2.9990 | |
29 | T | A | -1.9068 | |
30 | K | A | -2.8317 | |
31 | A | A | -2.4299 | |
32 | T | A | -2.1250 | |
33 | V | A | -1.4359 | |
34 | Q | A | -3.0639 | |
35 | E | A | -3.9272 | |
36 | K | A | -3.4677 | |
37 | A | A | -2.4481 | |
38 | E | A | -3.8254 | |
39 | R | A | -4.0451 | |
40 | M | A | -1.6292 | |
41 | T | A | -1.9272 | |
42 | A | A | -2.8277 | |
43 | R | A | -3.2426 | |
44 | D | A | -3.3791 | |
45 | P | A | -1.8400 | |
46 | V | A | -0.4933 | |
47 | Q | A | -2.2084 | |
48 | K | A | -3.4098 | |
49 | E | A | -2.6919 | |
50 | L | A | -1.1509 | |
51 | A | A | -2.2277 | |
52 | T | A | -2.9853 | |
53 | Q | A | -3.6011 | |
54 | K | A | -3.9430 | |
55 | K | A | -4.3174 | |
56 | E | A | -4.0398 | |
57 | A | A | -3.4701 | |
58 | K | A | -3.7244 | |
59 | M | A | -2.3899 | |
60 | N | A | -2.8589 | |
61 | Q | A | -2.9576 | |
62 | A | A | -2.2471 | |
63 | E | A | -2.2210 | |
64 | L | A | -1.3905 | |
65 | D | A | -2.9219 | |
66 | K | A | -3.3203 | |
67 | Q | A | -2.9982 | |
68 | A | A | -2.5264 | |
69 | A | A | -2.9353 | |
70 | R | A | -3.8530 | |
71 | Q | A | -3.6968 | |
72 | H | A | -3.3323 | |
73 | N | A | -3.5019 | |
74 | T | A | -2.8009 | |
75 | A | A | -2.3110 | |
76 | A | A | -2.3257 | |
77 | K | A | -2.9988 | |
78 | Q | A | -2.4573 | |
79 | S | A | -1.5196 | |
80 | A | A | -1.3433 | |
81 | T | A | -1.2919 | |
82 | T | A | -0.9405 | |
83 | A | A | -0.7271 | |
84 | G | A | -1.2159 | |
85 | H | A | -1.0134 | |
86 | M | A | -0.1091 | |
87 | G | A | -1.0903 | |
88 | H | A | -1.5855 | |
89 | G | A | -1.7457 | |
90 | H | A | -2.0320 | |
91 | H | A | -1.6836 | |
92 | T | A | -1.0058 | |
93 | T | A | -0.6132 | |
94 | G | A | -0.7939 | |
95 | T | A | -0.5610 | |
96 | G | A | -0.7788 | |
97 | T | A | -0.6072 | |
98 | G | A | -0.6371 | |
99 | T | A | -0.2191 | |
100 | A | A | 0.2110 | |
101 | T | A | 0.4683 | |
102 | Y | A | 1.1597 | |
103 | S | A | 0.2703 | |
104 | T | A | -0.2381 | |
105 | T | A | -0.5412 | |
106 | G | A | -1.1926 | |
107 | E | A | -1.5378 | |
108 | Y | A | -0.1497 | |
109 | G | A | -0.7780 | |
110 | Q | A | -1.1120 | |
111 | P | A | -0.6589 | |
112 | M | A | 0.2554 | |
113 | G | A | -0.5258 | |
114 | A | A | -0.7443 | |
115 | H | A | -1.6176 | |
116 | Q | A | -1.8330 | |
117 | T | A | -0.8581 | |
118 | S | A | -0.3849 | |
119 | A | A | 0.1618 | |
120 | M | A | 0.7951 | |
121 | P | A | -0.2349 | |
122 | G | A | -0.9702 | |
123 | H | A | -1.5757 | |
124 | G | A | -1.4189 | |
125 | T | A | -1.1766 | |
126 | G | A | -1.4178 | |
127 | Q | A | -1.6973 | |
128 | P | A | -1.2529 | |
129 | T | A | -1.0313 | |
130 | G | A | -0.8111 | |
131 | H | A | -0.6327 | |
132 | V | A | 0.6586 | |
133 | T | A | -0.4813 | |
134 | E | A | -1.1687 | |
135 | G | A | 0.1356 | |
136 | V | A | 1.8312 | |
137 | V | A | 1.8461 | |
138 | G | A | 0.5515 | |
139 | S | A | -0.1514 | |
140 | H | A | -0.6366 | |
141 | P | A | -0.0193 | |
142 | I | A | 1.1922 | |
143 | G | A | -0.3505 | |
144 | T | A | -1.0288 | |
145 | N | A | -2.1909 | |
146 | R | A | -2.9386 | |
147 | G | A | -2.0379 | |
148 | P | A | -1.4146 | |
149 | G | A | -1.1475 | |
150 | G | A | -1.0634 | |
151 | T | A | -0.4306 | |
152 | A | A | -0.3158 | |
153 | T | A | -0.4889 | |
154 | A | A | -0.7680 | |
155 | H | A | -1.9436 | |
156 | N | A | -2.1977 | |
157 | T | A | -1.9025 | |
158 | R | A | -2.3961 | |
159 | A | A | -1.4431 | |
160 | G | A | -1.4392 | |
161 | G | A | -1.6955 | |
162 | K | A | -2.6245 | |
163 | P | A | -2.1183 | |
164 | N | A | -2.4344 | |
165 | D | A | -2.0466 | |
166 | Y | A | 0.1382 | |
167 | G | A | 0.0623 | |
168 | Y | A | 0.8770 | |
169 | G | A | 0.1321 | |
170 | T | A | -0.3583 | |
171 | G | A | -0.7078 | |
172 | G | A | -0.8291 | |
173 | T | A | -0.3965 |