Project name: mi2699_3APG_40C_conf3

Status: done

Started: 2026-05-15 12:12:37
Chain sequence(s) A: AKFPKNFMFGYSWSGFQFEMGLPGSEVESDWWVWVHDKENIASGLVSGDLPENGPAYWHLYKQDHDIAEKLGMDCIRGGIEWARIFPKPTFDVKVDVEKDEEGNIISVDVPESTIKELEKIANMEALEHYRKIYSDWKERGKTFILNLYHWPLPLWIHDPIAVRKLGPDRAPAGWLDEKTVVEFVKFAAFVAYHLDDLVDMWSTMNEPNVVYNQGYINLRSGFPPGYLSFEAAEKAKFNLIQAHIGAYDAIKEYSEKSVGVIYAFAWHDPLAEEYKDEVEEIRKKDYEFVTILHSKGKLDWIGVNYYSRLVYGAKDGHLVPLPGYGFMSERGGFAKSGRPASDFGWEMYPEGLENLLKYLNNAYELPMIITENGMADAADRYRPHYLVSHLKAVYNAMKEGADVRGYLHWSLTDNYEWAQGFRMRFGLVYVDFETKKRYLRPSALVFREIATQKEIPEELAHLADLKFVTR
C: AKFPKNFMFGYSWSGFQFEMGLPGSEVESDWWVWVHDKENIASGLVSGDLPENGPAYWHLYKQDHDIAEKLGMDCIRGGIEWARIFPKPTFDVKVDVEKDEEGNIISVDVPESTIKELEKIANMEALEHYRKIYSDWKERGKTFILNLYHWPLPLWIHDPIAVRKLGPDRAPAGWLDEKTVVEFVKFAAFVAYHLDDLVDMWSTMNEPNVVYNQGYINLRSGFPPGYLSFEAAEKAKFNLIQAHIGAYDAIKEYSEKSVGVIYAFAWHDPLAEEYKDEVEEIRKKDYEFVTILHSKGKLDWIGVNYYSRLVYGAKDGHLVPLPGYGFMSERGGFAKSGRPASDFGWEMYPEGLENLLKYLNNAYELPMIITENGMADAADRYRPHYLVSHLKAVYNAMKEGADVRGYLHWSLTDNYEWAQGFRMRFGLVYVDFETKKRYLRPSALVFREIATQKEIPEELAHLADLKFVTR
B: AKFPKNFMFGYSWSGFQFEMGLPGSEVESDWWVWVHDKENIASGLVSGDLPENGPAYWHLYKQDHDIAEKLGMDCIRGGIEWARIFPKPTFDVKVDVEKDEEGNIISVDVPESTIKELEKIANMEALEHYRKIYSDWKERGKTFILNLYHWPLPLWIHDPIAVRKLGPDRAPAGWLDEKTVVEFVKFAAFVAYHLDDLVDMWSTMNEPNVVYNQGYINLRSGFPPGYLSFEAAEKAKFNLIQAHIGAYDAIKEYSEKSVGVIYAFAWHDPLAEEYKDEVEEIRKKDYEFVTILHSKGKLDWIGVNYYSRLVYGAKDGHLVPLPGYGFMSERGGFAKSGRPASDFGWEMYPEGLENLLKYLNNAYELPMIITENGMADAADRYRPHYLVSHLKAVYNAMKEGADVRGYLHWSLTDNYEWAQGFRMRFGLVYVDFETKKRYLRPSALVFREIATQKEIPEELAHLADLKFVTR
D: AKFPKNFMFGYSWSGFQFEMGLPGSEVESDWWVWVHDKENIASGLVSGDLPENGPAYWHLYKQDHDIAEKLGMDCIRGGIEWARIFPKPTFDVKVDVEKDEEGNIISVDVPESTIKELEKIANMEALEHYRKIYSDWKERGKTFILNLYHWPLPLWIHDPIAVRKLGPDRAPAGWLDEKTVVEFVKFAAFVAYHLDDLVDMWSTMNEPNVVYNQGYINLRSGFPPGYLSFEAAEKAKFNLIQAHIGAYDAIKEYSEKSVGVIYAFAWHDPLAEEYKDEVEEIRKKDYEFVTILHSKGKLDWIGVNYYSRLVYGAKDGHLVPLPGYGFMSERGGFAKSGRPASDFGWEMYPEGLENLLKYLNNAYELPMIITENGMADAADRYRPHYLVSHLKAVYNAMKEGADVRGYLHWSLTDNYEWAQGFRMRFGLVYVDFETKKRYLRPSALVFREIATQKEIPEELAHLADLKFVTR
input PDB
Selected Chain(s) A,C,B,D
Distance of aggregation 10 Å
FoldX usage Yes
pH calculations Yes
alphaCutter usage No
Dynamic mode No
Automated mutations No
Downloads Download all the data
Simulation log
[INFO]       Logger:   Verbosity set to: 2 - [INFO]                                                (00:00:01)
[WARNING]    runJob:   Working directory already exists (possibly overwriting previous results -ow 
                       to prevent this behavior)                                                   (00:00:01)
[INFO]       runJob:   Starting aggrescan3d job on: input.pdb with all chain(s) selected           (00:00:01)
[INFO]       runJob:   Creating pdb object from: input.pdb                                         (00:00:01)
[INFO]       PDB-Info: The input structure is globular. Max score is recommended for pH analysis.  (00:00:14)
[INFO]       FoldX:    Starting FoldX energy minimization                                          (00:00:15)
[INFO]       Analysis: Starting Aggrescan4D on folded.pdb                                          (01:17:25)
[INFO]       agg3D:    Running pKa-ANI on                                                          
                       /STORAGE/DATA/lcbio/aggreskan/414b45c1b118f6b/tmp/folded.pdb                (01:17:25)
[INFO]       Main:     Simulation completed successfully.                                          (01:59:30)
Show buried residues

Minimal score value
-4.5003
Maximal score value
1.2244
Average score
-0.8184
Total score value
-1541.9305

The table below lists A4D score for protein residues. Residues with A4D score > 0.0000 are marked by yellow rows.

residue index residue name chain Aggrescan4D score mutation
1 A A -1.8049
2 K A -2.7519
3 F A 0.0000
4 P A -2.3774
5 K A -2.8602
6 N A -2.4421
7 F A -1.6078
8 M A -0.6843
9 F A 0.0000
10 G A 0.0000
11 Y A 0.0000
12 S A 0.0000
13 W A 0.0000
14 S A 0.0000
15 G A -0.1343
16 F A 0.0000
17 Q A 0.0000
18 F A 0.0000
19 E A 0.0000
20 M A 0.0000
21 G A 0.0000
22 L A -0.5549
23 P A -0.9623
24 G A -0.9981
25 S A 0.0000
26 E A -2.3570
27 V A -1.5437
28 E A -1.8544
29 S A 0.0000
30 D A 0.0000
31 W A 0.0000
32 W A -0.4200
33 V A -0.0089
34 W A 0.0000
35 V A 0.0000
36 H A -0.8016
37 D A -1.0399
38 K A -1.8728
39 E A -0.8987
40 N A 0.0000
41 I A -0.4438
42 A A -0.4510
43 S A -0.7578
44 G A -0.9694
45 L A -0.4466
46 V A 0.0000
47 S A -0.5338
48 G A -1.0059
49 D A -0.7855
50 L A -0.1132
51 P A 0.0000
52 E A -1.4499
53 N A -1.0789
54 G A 0.0000
55 P A 0.0000
56 A A 0.0000
57 Y A 0.0000
58 W A 0.0000
59 H A -0.7642
60 L A -0.7814
61 Y A -1.4452
62 K A -2.6296
63 Q A -2.6407
64 D A 0.0000
65 H A 0.0000
66 D A -2.8360
67 I A 0.0000
68 A A 0.0000
69 E A -1.8154
70 K A -1.6430
71 L A 0.0000
72 G A -1.4486
73 M A 0.0000
74 D A -1.0108
75 C A 0.0000
76 I A 0.0000
77 R A 0.0000
78 G A 0.0000
79 G A -0.1328
80 I A 0.0000
81 E A -0.2083
82 W A 0.0000
83 A A -0.6367
84 R A 0.0000
85 I A 0.0000
86 F A 0.0000
87 P A -1.2039
88 K A -1.5272
89 P A -0.9086
90 T A 0.0000
91 F A -0.9547
92 D A -1.9432
93 V A 0.0000
94 K A -2.4711
95 V A -1.8716
96 D A -2.7646
97 V A -1.6122
98 E A -2.2229
99 K A -2.1964
100 D A -2.7847
101 E A -3.3867
102 E A -3.2192
103 G A -2.3303
104 N A -1.2800
105 I A 0.0000
106 I A 0.8632
107 S A -0.6866
108 V A -1.4710
109 D A -3.0215
110 V A 0.0000
111 P A -2.4531
112 E A -2.7439
113 S A -2.2407
114 T A 0.0000
115 I A 0.0000
116 K A -3.3579
117 E A -3.0454
118 L A 0.0000
119 E A -2.6744
120 K A -2.6714
121 I A -1.5058
122 A A -1.6740
123 N A -1.6586
124 M A -1.8114
125 E A -2.5858
126 A A -1.6576
127 L A 0.0000
128 E A -3.1413
129 H A -2.3552
130 Y A 0.0000
131 R A -2.4902
132 K A -2.5118
133 I A 0.0000
134 Y A 0.0000
135 S A -2.1846
136 D A -2.2485
137 W A 0.0000
138 K A -3.0263
139 E A -2.9033
140 R A -2.3918
141 G A -2.0890
142 K A -1.8457
143 T A -1.1207
144 F A 0.0000
145 I A 0.0000
146 L A 0.0000
147 N A 0.0000
148 L A 0.0000
149 Y A 0.0000
150 H A -0.1511
151 W A 0.0285
152 P A 0.0000
153 L A 0.0000
154 P A 0.0000
155 L A -0.3011
156 W A -0.4165
157 I A 0.0000
158 H A 0.0000
159 D A -0.2277
160 P A 0.0000
161 I A -0.1426
162 A A -0.7926
163 V A 0.0000
164 R A -1.0738
165 K A -1.8864
166 L A -1.3020
167 G A -1.6533
168 P A -1.8280
169 D A -2.7306
170 R A -2.8166
171 A A 0.0000
172 P A -0.9761
173 A A -1.3544
174 G A 0.0000
175 W A 0.0000
176 L A 0.0000
177 D A -2.2048
178 E A -2.7445
179 K A -2.3936
180 T A 0.0000
181 V A 0.0000
182 V A -0.7889
183 E A 0.0000
184 F A 0.0000
185 V A 0.0000
186 K A 0.0000
187 F A 0.0000
188 A A 0.0000
189 A A 0.0000
190 F A 0.0000
191 V A 0.0000
192 A A 0.0000
193 Y A 0.0182
194 H A -0.4206
195 L A 0.0000
196 D A -1.7713
197 D A -2.3993
198 L A 0.0000
199 V A 0.0000
200 D A -2.2772
201 M A 0.0000
202 W A 0.0000
203 S A 0.0000
204 T A 0.0000
205 M A 0.0000
206 N A 0.0000
207 E A -0.1988
208 P A 0.0000
209 N A -0.8890
210 V A -0.4891
211 V A 0.0000
212 Y A 0.0000
213 N A -1.6200
214 Q A -1.5988
215 G A 0.0000
216 Y A 0.0000
217 I A 0.0000
218 N A -1.4980
219 L A -1.1236
220 R A -2.2908
221 S A -1.3356
222 G A 0.0000
223 F A 0.0000
224 P A 0.0000
225 P A 0.0000
226 G A -0.4576
227 Y A -0.0777
228 L A -0.3505
229 S A 0.0000
230 F A -0.9554
231 E A -2.3672
232 A A 0.0000
233 A A 0.0000
234 E A -3.0210
235 K A -2.7326
236 A A 0.0000
237 K A -1.7883
238 F A -0.9456
239 N A 0.0000
240 L A 0.0000
241 I A 0.0000
242 Q A 0.0000
243 A A 0.0000
244 H A 0.0000
245 I A 0.0512
246 G A 0.0000
247 A A 0.0000
248 Y A -0.7183
249 D A -1.4875
250 A A 0.0000
251 I A 0.0000
252 K A -2.2586
253 E A -2.8573
254 Y A -1.4929
255 S A 0.0000
256 E A -2.7513
257 K A -1.9074
258 S A -1.1528
259 V A 0.0000
260 G A 0.0000
261 V A 0.0000
262 I A 0.0000
263 Y A 0.0000
264 A A -0.1622
265 F A 0.0000
266 A A -0.0510
267 W A 0.0000
268 H A 0.0000
269 D A -0.5483
270 P A -1.2894
271 L A 0.1262
272 A A -1.3842
273 E A -3.3313
274 E A -3.7869
275 Y A -3.5176
276 K A -4.2414
277 D A -4.3382
278 E A -4.0861
279 V A 0.0000
280 E A -4.1693
281 E A -4.4559
282 I A -3.1260
283 R A 0.0000
284 K A -3.9649
285 K A -3.9363
286 D A -3.0465
287 Y A 0.0000
288 E A -2.4870
289 F A 0.0000
290 V A 0.0000
291 T A -1.2896
292 I A -0.6235
293 L A 0.0000
294 H A -1.4994
295 S A -1.1666
296 K A -1.8767
297 G A -1.5212
298 K A -1.2168
299 L A 0.0000
300 D A -0.6812
301 W A 0.0000
302 I A 0.0000
303 G A 0.0000
304 V A 0.0000
305 N A 0.0000
306 Y A 0.0000
307 Y A 0.3182
308 S A 0.0000
309 R A 0.0000
310 L A 0.7563
311 V A 0.0000
312 Y A 0.0000
313 G A -0.8488
314 A A -1.8249
315 K A -2.7044
316 D A -3.0337
317 G A -2.0116
318 H A -1.4973
319 L A -0.2967
320 V A 1.1863
321 P A 1.1728
322 L A 0.8927
323 P A -0.0483
324 G A -0.7088
325 Y A -0.0534
326 G A 0.0000
327 F A 0.6120
328 M A 0.2999
329 S A -1.1653
330 E A -2.7801
331 R A -2.8868
332 G A -1.9313
333 G A -1.4852
334 F A -1.0497
335 A A 0.0000
336 K A -2.1447
337 S A -1.1456
338 G A 0.0000
339 R A -0.9826
340 P A 0.0000
341 A A 0.0000
342 S A 0.0000
343 D A -2.2905
344 F A -1.1019
345 G A 0.0000
346 W A -0.0065
347 E A 0.0000
348 M A 0.0000
349 Y A -0.0577
350 P A 0.0000
351 E A -1.2267
352 G A 0.0000
353 L A 0.0000
354 E A -1.7859
355 N A -1.5176
356 L A 0.0000
357 L A 0.0000
358 K A -2.3235
359 Y A -1.1127
360 L A 0.0000
361 N A -2.1864
362 N A -2.3484
363 A A -1.1785
364 Y A 0.0000
365 E A -2.6021
366 L A -1.3910
367 P A -1.3618
368 M A 0.0000
369 I A 0.0000
370 I A 0.0000
371 T A 0.0000
372 E A -0.1518
373 N A 0.0000
374 G A 0.0000
375 M A 0.0000
376 A A 0.0000
377 D A 0.0000
378 A A -0.0261
379 A A 0.2622
380 D A 0.0000
381 R A -0.6140
382 Y A 0.0000
383 R A 0.0000
384 P A 0.0000
385 H A 0.0000
386 Y A 0.0000
387 L A 0.0000
388 V A 0.0000
389 S A 0.0000
390 H A 0.0000
391 L A 0.0000
392 K A -0.9975
393 A A 0.0000
394 V A 0.0000
395 Y A -1.4996
396 N A -2.1123
397 A A 0.0000
398 M A 0.0000
399 K A -3.1540
400 E A -3.4286
401 G A -2.7754
402 A A 0.0000
403 D A -3.5148
404 V A 0.0000
405 R A -2.3266
406 G A 0.0000
407 Y A 0.0000
408 L A 0.0000
409 H A 0.0000
410 W A 0.0000
411 S A 0.0000
412 L A 0.0000
413 T A 0.0000
414 D A 0.0000
415 N A 0.0000
416 Y A 0.0000
417 E A -0.4967
418 W A 0.0000
419 A A -0.5191
420 Q A -0.9543
421 G A 0.0000
422 F A -0.7542
423 R A -2.0024
424 M A 0.0000
425 R A 0.0000
426 F A 0.0000
427 G A 0.0000
428 L A 0.0000
429 V A 0.0000
430 Y A -0.2694
431 V A 0.0000
432 D A -1.3683
433 F A -1.2433
434 E A -2.2046
435 T A -1.6063
436 K A -1.4771
437 K A -2.1731
438 R A -1.4111
439 Y A -0.9061
440 L A 0.0000
441 R A 0.0000
442 P A 0.0000
443 S A 0.0000
444 A A 0.0000
445 L A 0.0000
446 V A 0.0000
447 F A 0.0000
448 R A -1.4111
449 E A -1.7341
450 I A 0.0000
451 A A 0.0000
452 T A -1.7597
453 Q A -2.5246
454 K A -2.6668
455 E A -2.6500
456 I A 0.0000
457 P A -2.2358
458 E A -2.6367
459 E A -2.0506
460 L A 0.0000
461 A A -1.3834
462 H A -1.3364
463 L A 0.0000
464 A A -0.8976
465 D A -1.4574
466 L A -1.1957
467 K A -1.9132
468 F A -0.5956
469 V A 0.0000
470 T A -1.3261
471 R A -2.1462
1 A B -1.0711
2 K B -2.3691
3 F B 0.0000
4 P B -2.0280
5 K B -2.7834
6 N B -2.4426
7 F B 0.0000
8 M B -1.2242
9 F B 0.0000
10 G B 0.0000
11 Y B 0.0000
12 S B 0.0000
13 W B 0.0000
14 S B 0.0000
15 G B -0.0834
16 F B 0.0000
17 Q B 0.0000
18 F B 0.0000
19 E B 0.0000
20 M B 0.0000
21 G B -0.7836
22 L B -0.4315
23 P B -0.7129
24 G B -0.8284
25 S B 0.0000
26 E B -1.3055
27 V B 0.0000
28 E B -1.7792
29 S B 0.0000
30 D B 0.0000
31 W B 0.0000
32 W B -0.3001
33 V B -0.1345
34 W B 0.0000
35 V B -0.1931
36 H B -0.8436
37 D B -0.9945
38 K B -1.6808
39 E B -0.8843
40 N B 0.0000
41 I B -0.0090
42 A B -0.1849
43 S B 0.0000
44 G B -0.3331
45 L B 0.0000
46 V B -0.1312
47 S B -0.3071
48 G B -0.5988
49 D B -0.8967
50 L B -0.5120
51 P B 0.0000
52 E B -1.4725
53 N B -1.1129
54 G B 0.0000
55 P B 0.0000
56 A B 0.0000
57 Y B 0.0000
58 W B -0.2562
59 H B -0.6460
60 L B -0.7285
61 Y B 0.0000
62 K B -2.1734
63 Q B -2.1191
64 D B 0.0000
65 H B 0.0000
66 D B -3.0342
67 I B 0.0000
68 A B 0.0000
69 E B -2.9738
70 K B -2.5346
71 L B 0.0000
72 G B -1.7985
73 M B 0.0000
74 D B -2.2904
75 C B 0.0000
76 I B 0.0000
77 R B 0.0000
78 G B 0.0000
79 G B 0.0000
80 I B 0.0000
81 E B -0.2026
82 W B 0.0000
83 A B -0.8069
84 R B 0.0000
85 I B 0.0000
86 F B 0.0000
87 P B -1.3289
88 K B -1.7291
89 P B -1.0178
90 T B 0.0000
91 F B -0.9322
92 D B -1.9908
93 V B -1.5474
94 K B -2.3836
95 V B 0.0000
96 D B -2.9187
97 V B -2.1897
98 E B -2.8650
99 K B -3.4216
100 D B -3.3512
101 E B -3.6973
102 E B -3.5457
103 G B -3.1230
104 N B -2.1884
105 I B -1.1579
106 I B 0.0730
107 S B -0.9664
108 V B 0.0000
109 D B -3.0668
110 V B 0.0000
111 P B -1.9106
112 E B -2.3975
113 S B -1.7510
114 T B -1.8354
115 I B 0.0000
116 K B -2.5521
117 E B -2.8743
118 L B 0.0000
119 E B -1.9736
120 K B -2.3848
121 I B -1.6123
122 A B -1.5324
123 N B -1.6270
124 M B -1.7413
125 E B -2.6171
126 A B -1.9123
127 L B 0.0000
128 E B -3.2233
129 H B -2.3526
130 Y B 0.0000
131 R B -2.3767
132 K B -2.5542
133 I B 0.0000
134 Y B 0.0000
135 S B -2.0688
136 D B -1.9059
137 W B 0.0000
138 K B -2.3748
139 E B -2.5049
140 R B -2.1768
141 G B -1.8415
142 K B -1.9471
143 T B -0.9839
144 F B 0.0000
145 I B 0.0000
146 L B 0.0000
147 N B 0.0000
148 L B 0.0000
149 Y B 0.0000
150 H B -0.1562
151 W B 0.0000
152 P B 0.0000
153 L B 0.0000
154 P B 0.0000
155 L B -0.2289
156 W B -0.1800
157 I B 0.0000
158 H B 0.0000
159 D B -0.2388
160 P B 0.0000
161 I B -0.2245
162 A B -0.8044
163 V B 0.0000
164 R B -1.2413
165 K B -1.9177
166 L B -1.2377
167 G B -1.6257
168 P B -1.8420
169 D B -2.6314
170 R B -2.7219
171 A B -1.5851
172 P B -0.6214
173 A B 0.0000
174 G B 0.0000
175 W B 0.0000
176 L B 0.0000
177 D B -2.0863
178 E B -2.7397
179 K B -2.4708
180 T B 0.0000
181 V B 0.0000
182 V B -0.5846
183 E B 0.0000
184 F B 0.0000
185 V B 0.0000
186 K B 0.0000
187 F B 0.0000
188 A B 0.0000
189 A B 0.0000
190 F B 0.0000
191 V B 0.0000
192 A B 0.0000
193 Y B -0.1752
194 H B -0.5228
195 L B 0.0000
196 D B -1.4786
197 D B -2.1218
198 L B 0.0000
199 V B 0.0000
200 D B -1.3064
201 M B -0.6540
202 W B 0.0000
203 S B 0.0000
204 T B 0.0000
205 M B 0.0000
206 N B 0.0000
207 E B -0.1321
208 P B 0.0000
209 N B 0.0000
210 V B 0.1131
211 V B 0.0832
212 Y B 0.0000
213 N B -0.3548
214 Q B 0.0000
215 G B 0.0000
216 Y B 0.0000
217 I B -0.0061
218 N B -0.8311
219 L B -1.1323
220 R B -2.1847
221 S B -1.0384
222 G B 0.0000
223 F B 0.0000
224 P B 0.0000
225 P B 0.0000
226 G B -0.0526
227 Y B 0.0644
228 L B -0.0014
229 S B -0.4623
230 F B -0.8165
231 E B -2.2296
232 A B 0.0000
233 A B 0.0000
234 E B -2.5294
235 K B -2.0371
236 A B 0.0000
237 K B -1.1195
238 F B -0.2158
239 N B -0.8850
240 L B 0.0000
241 I B 0.0000
242 Q B -0.1557
243 A B 0.0000
244 H B 0.0000
245 I B 0.0120
246 G B 0.0000
247 A B 0.0000
248 Y B 0.0000
249 D B -1.4207
250 A B 0.0000
251 I B 0.0000
252 K B -3.0537
253 E B -2.7874
254 Y B -1.5326
255 S B -2.1461
256 E B -2.6873
257 K B -1.7132
258 S B -1.1060
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222 G D 0.0000
223 F D 0.0165
224 P D 0.0857
225 P D 0.0000
226 G D -0.2248
227 Y D -0.4289
228 L D 0.0000
229 S D -0.7826
230 F D -0.8399
231 E D -2.2600
232 A D 0.0000
233 A D -1.5987
234 E D -2.6751
235 K D -2.2121
236 A D 0.0000
237 K D -1.0035
238 F D -0.5422
239 N D 0.0000
240 L D 0.0000
241 I D 0.0000
242 Q D 0.0000
243 A D 0.0000
244 H D 0.0000
245 I D 0.0000
246 G D 0.0000
247 A D 0.0000
248 Y D -0.8663
249 D D -1.9330
250 A D 0.0000
251 I D 0.0000
252 K D -2.3597
253 E D -3.0398
254 Y D -1.7146
255 S D -1.9477
256 E D -2.5085
257 K D -1.6439
258 S D -0.9587
259 V D 0.0000
260 G D 0.0000
261 V D 0.0000
262 I D 0.0000
263 Y D 0.0000
264 A D -0.1037
265 F D 0.0000
266 A D 0.0845
267 W D 0.0000
268 H D 0.0000
269 D D -0.2258
270 P D -1.0515
271 L D 0.4109
272 A D -1.0529
273 E D -3.0680
274 E D -3.3621
275 Y D -2.7791
276 K D -3.9338
277 D D -4.2982
278 E D -3.6549
279 V D 0.0000
280 E D -3.7740
281 E D -4.1017
282 I D -2.4001
283 R D 0.0000
284 K D -3.6125
285 K D -3.5161
286 D D -2.4728
287 Y D 0.0000
288 E D -1.9580
289 F D 0.0000
290 V D 0.0000
291 T D -0.9455
292 I D -0.3021
293 L D 0.0000
294 H D -1.3404
295 S D -1.1112
296 K D -1.8837
297 G D -1.6376
298 K D -1.5883
299 L D 0.0000
300 D D -0.7665
301 W D 0.0000
302 I D 0.0000
303 G D 0.0000
304 V D 0.0000
305 N D 0.0000
306 Y D 0.0000
307 Y D 0.3899
308 S D 0.0000
309 R D 0.1014
310 L D 0.6767
311 V D 0.0000
312 Y D 0.0000
313 G D 0.0000
314 A D -1.6088
315 K D -2.7940
316 D D -3.1053
317 G D -2.3742
318 H D -2.1451
319 L D -1.2234
320 V D -0.2918
321 P D 0.3071
322 L D 0.4657
323 P D -0.1272
324 G D -0.6060
325 Y D -0.1350
326 G D 0.0000
327 F D 1.2244
328 M D 0.4786
329 S D -0.9828
330 E D -2.6558
331 R D -2.5261
332 G D -1.4928
333 G D -1.2132
334 F D -1.2072
335 A D 0.0000
336 K D -2.2002
337 S D -1.2072
338 G D -1.4506
339 R D -1.1961
340 P D 0.0000
341 A D 0.0000
342 S D 0.0000
343 D D -1.2892
344 F D -0.6689
345 G D 0.0000
346 W D 0.3443
347 E D 0.0000
348 M D 0.0000
349 Y D -0.5143
350 P D 0.0000
351 E D -2.1571
352 G D 0.0000
353 L D 0.0000
354 E D -1.7853
355 N D -1.5660
356 L D 0.0000
357 L D 0.0000
358 K D -2.0904
359 Y D -1.1637
360 L D 0.0000
361 N D -2.4533
362 N D -2.1153
363 A D -1.2329
364 Y D 0.0000
365 E D -2.5613
366 L D -1.3646
367 P D -1.3829
368 M D 0.0000
369 I D 0.0000
370 I D 0.0000
371 T D 0.0000
372 E D 0.0000
373 N D 0.0000
374 G D 0.0000
375 M D 0.0000
376 A D 0.0000
377 D D 0.0000
378 A D -0.2694
379 A D -0.2301
380 D D 0.0000
381 R D -0.4550
382 Y D 0.0000
383 R D 0.0000
384 P D 0.0000
385 H D 0.0000
386 Y D 0.0000
387 L D 0.0000
388 V D 0.0000
389 S D 0.0000
390 H D 0.0000
391 L D 0.0000
392 K D -0.9895
393 A D 0.0000
394 V D 0.0000
395 Y D -1.0851
396 N D -1.8571
397 A D 0.0000
398 M D -2.3403
399 K D -2.9365
400 E D -3.2431
401 G D -2.6165
402 A D 0.0000
403 D D -2.9787
404 V D 0.0000
405 R D -2.0913
406 G D 0.0000
407 Y D 0.0000
408 L D 0.0000
409 H D 0.0000
410 W D 0.0000
411 S D 0.0000
412 L D 0.0000
413 T D 0.0000
414 D D 0.0000
415 N D 0.0000
416 Y D 0.0000
417 E D -0.6654
418 W D -0.0818
419 A D -0.4731
420 Q D -1.0637
421 G D 0.0000
422 F D -0.9132
423 R D -1.9308
424 M D 0.0000
425 R D -0.5737
426 F D 0.0000
427 G D 0.0000
428 L D 0.0000
429 V D 0.0000
430 Y D 0.0000
431 V D 0.0000
432 D D -1.3370
433 F D 0.0000
434 E D -2.3192
435 T D -1.4891
436 K D -1.2702
437 K D -1.7251
438 R D 0.0000
439 Y D -0.7712
440 L D 0.0000
441 R D 0.0000
442 P D 0.0000
443 S D 0.0000
444 A D 0.0000
445 L D 0.0000
446 V D 0.0000
447 F D 0.0000
448 R D -1.2267
449 E D -0.9758
450 I D 0.0000
451 A D 0.0000
452 T D -1.3525
453 Q D -1.9516
454 K D -2.7651
455 E D -2.0545
456 I D -1.2484
457 P D -1.6044
458 E D -2.0705
459 E D -1.5916
460 L D 0.0000
461 A D -1.1848
462 H D -1.1692
463 L D 0.0000
464 A D -1.3023
465 D D -1.8917
466 L D -1.3505
467 K D -1.8222
468 F D -0.9431
469 V D 0.0000
470 T D -1.4323
471 R D -2.1981
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Calculations for various pH values

This page contains details and comparisons for all models calculated at different pH points.
Please find suggestions on interpreting the results below. More details can be found in the Tutorial.
The input structure is globular. Max score is recommended for pH analysis.

pH
Average A4D Score
Max A4D Score
4.0 -0.6957 3.1438 View CSV PDB
4.5 -0.7723 3.0994 View CSV PDB
5.0 -0.8691 3.0495 View CSV PDB
5.5 -0.9674 2.9955 View CSV PDB
6.0 -1.046 2.9457 View CSV PDB
6.5 -1.0886 2.9085 View CSV PDB
7.0 -1.093 2.8879 View CSV PDB
7.5 -1.0703 2.8792 View CSV PDB
8.0 -1.0326 2.8761 View CSV PDB
8.5 -0.9854 2.8751 View CSV PDB
9.0 -0.9294 2.9471 View CSV PDB