Project name: jrk_3AP40

Status: done

Started: 2026-02-06 22:12:27
Chain sequence(s) A: AKFPKNFMFGYSWSGFQFEMGLPGSEVESDWWVWVHDKENIASGLVSGDLPENGPAYWHLYKQDHDIAEKLGMDCIRGGIEWARIFPKPTFDVKVDVEKDEEGNIISVDVPESTIKELEKIANMEALEHYRKIYSDWKERGKTFILNLYHWPLPLWIHDPIAVRKLGPDRAPAGWLDEKTVVEFVKFAAFVAYHLDDLVDMWSTMNEPNVVYNQGYINLRSGFPPGYLSFEAAEKAKFNLIQAHIGAYDAIKEYSEKSVGVIYAFAWHDPLAEEYKDEVEEIRKKDYEFVTILHSKGKLDWIGVNYYSRLVYGAKDGHLVPLPGYGFMSERGGFAKSGRPASDFGWEMYPEGLENLLKYLNNAYELPMIITENGMADAADRYRPHYLVSHLKAVYNAMKEGADVRGYLHWSLTDNYEWAQGFRMRFGLVYVDFETKKRYLRPSALVFREIATQKEIPEELAHLADLKFVTR
C: AKFPKNFMFGYSWSGFQFEMGLPGSEVESDWWVWVHDKENIASGLVSGDLPENGPAYWHLYKQDHDIAEKLGMDCIRGGIEWARIFPKPTFDVKVDVEKDEEGNIISVDVPESTIKELEKIANMEALEHYRKIYSDWKERGKTFILNLYHWPLPLWIHDPIAVRKLGPDRAPAGWLDEKTVVEFVKFAAFVAYHLDDLVDMWSTMNEPNVVYNQGYINLRSGFPPGYLSFEAAEKAKFNLIQAHIGAYDAIKEYSEKSVGVIYAFAWHDPLAEEYKDEVEEIRKKDYEFVTILHSKGKLDWIGVNYYSRLVYGAKDGHLVPLPGYGFMSERGGFAKSGRPASDFGWEMYPEGLENLLKYLNNAYELPMIITENGMADAADRYRPHYLVSHLKAVYNAMKEGADVRGYLHWSLTDNYEWAQGFRMRFGLVYVDFETKKRYLRPSALVFREIATQKEIPEELAHLADLKFVTR
B: AKFPKNFMFGYSWSGFQFEMGLPGSEVESDWWVWVHDKENIASGLVSGDLPENGPAYWHLYKQDHDIAEKLGMDCIRGGIEWARIFPKPTFDVKVDVEKDEEGNIISVDVPESTIKELEKIANMEALEHYRKIYSDWKERGKTFILNLYHWPLPLWIHDPIAVRKLGPDRAPAGWLDEKTVVEFVKFAAFVAYHLDDLVDMWSTMNEPNVVYNQGYINLRSGFPPGYLSFEAAEKAKFNLIQAHIGAYDAIKEYSEKSVGVIYAFAWHDPLAEEYKDEVEEIRKKDYEFVTILHSKGKLDWIGVNYYSRLVYGAKDGHLVPLPGYGFMSERGGFAKSGRPASDFGWEMYPEGLENLLKYLNNAYELPMIITENGMADAADRYRPHYLVSHLKAVYNAMKEGADVRGYLHWSLTDNYEWAQGFRMRFGLVYVDFETKKRYLRPSALVFREIATQKEIPEELAHLADLKFVTR
D: AKFPKNFMFGYSWSGFQFEMGLPGSEVESDWWVWVHDKENIASGLVSGDLPENGPAYWHLYKQDHDIAEKLGMDCIRGGIEWARIFPKPTFDVKVDVEKDEEGNIISVDVPESTIKELEKIANMEALEHYRKIYSDWKERGKTFILNLYHWPLPLWIHDPIAVRKLGPDRAPAGWLDEKTVVEFVKFAAFVAYHLDDLVDMWSTMNEPNVVYNQGYINLRSGFPPGYLSFEAAEKAKFNLIQAHIGAYDAIKEYSEKSVGVIYAFAWHDPLAEEYKDEVEEIRKKDYEFVTILHSKGKLDWIGVNYYSRLVYGAKDGHLVPLPGYGFMSERGGFAKSGRPASDFGWEMYPEGLENLLKYLNNAYELPMIITENGMADAADRYRPHYLVSHLKAVYNAMKEGADVRGYLHWSLTDNYEWAQGFRMRFGLVYVDFETKKRYLRPSALVFREIATQKEIPEELAHLADLKFVTR
input PDB
Selected Chain(s) A,B,C,D
Distance of aggregation 10 Å
FoldX usage Yes
pH calculations Yes
alphaCutter usage No
Dynamic mode No
Automated mutations No
Downloads Download all the data
Simulation log
[INFO]       Logger:   Verbosity set to: 2 - [INFO]                                                (00:00:01)
[WARNING]    runJob:   Working directory already exists (possibly overwriting previous results -ow 
                       to prevent this behavior)                                                   (00:00:01)
[INFO]       runJob:   Starting aggrescan3d job on: input.pdb with all chain(s) selected           (00:00:01)
[INFO]       runJob:   Creating pdb object from: input.pdb                                         (00:00:01)
[INFO]       PDB-Info: The input structure is globular. Max score is recommended for pH analysis.  (00:00:13)
[INFO]       FoldX:    Starting FoldX energy minimization                                          (00:00:14)
[INFO]       Analysis: Starting Aggrescan4D on folded.pdb                                          (00:55:23)
[INFO]       agg3D:    Running pKa-ANI on                                                          
                       /STORAGE/DATA/lcbio/aggreskan/422319654586bfd/tmp/folded.pdb                (00:55:23)
[INFO]       Main:     Simulation completed successfully.                                          (01:34:21)
Show buried residues

Minimal score value
-4.8984
Maximal score value
1.2818
Average score
-0.7589
Total score value
-1426.7555

The table below lists A4D score for protein residues. Residues with A4D score > 0.0000 are marked by yellow rows.

residue index residue name chain Aggrescan4D score mutation
1 A A -1.4026
2 K A -2.2743
3 F A 0.0000
4 P A -2.0758
5 K A -2.8907
6 N A -2.3706
7 F A 0.0000
8 M A -0.8883
9 F A 0.0000
10 G A 0.0000
11 Y A 0.0000
12 S A 0.0000
13 W A 0.0000
14 S A 0.0000
15 G A 0.0000
16 F A 0.0000
17 Q A 0.0000
18 F A 0.0000
19 E A 0.0000
20 M A 0.0000
21 G A 0.0000
22 L A -0.6574
23 P A -1.0810
24 G A -1.0234
25 S A 0.0000
26 E A -2.4128
27 V A -1.5120
28 E A -1.8500
29 S A 0.0000
30 D A 0.0000
31 W A 0.0000
32 W A 0.0000
33 V A -0.5650
34 W A 0.0000
35 V A 0.0000
36 H A -1.6368
37 D A -1.3029
38 K A -1.7814
39 E A 0.0000
40 N A 0.0000
41 I A -0.4122
42 A A -0.2360
43 S A 0.0000
44 G A -0.5689
45 L A 0.0000
46 V A 0.0000
47 S A -0.7543
48 G A -1.0427
49 D A -1.4439
50 L A -1.0668
51 P A 0.0000
52 E A -2.2230
53 N A -1.6291
54 G A 0.0000
55 P A 0.0000
56 A A 0.0000
57 Y A 0.0000
58 W A -0.3289
59 H A -0.9673
60 L A -0.8374
61 Y A 0.0000
62 K A -2.2243
63 Q A -2.3158
64 D A 0.0000
65 H A 0.0000
66 D A -2.5931
67 I A -1.5697
68 A A 0.0000
69 E A -2.4014
70 K A -1.9484
71 L A 0.0000
72 G A -1.4439
73 M A 0.0000
74 D A -0.9907
75 C A 0.0000
76 I A 0.0000
77 R A 0.0000
78 G A 0.0000
79 G A 0.0000
80 I A 0.0000
81 E A 0.0000
82 W A 0.0000
83 A A 0.0000
84 R A 0.0000
85 I A 0.0000
86 F A 0.0000
87 P A -0.8251
88 K A -0.9850
89 P A -0.5688
90 T A 0.0000
91 F A -0.6085
92 D A -2.0202
93 V A 0.0000
94 K A -2.4780
95 V A -2.0285
96 D A -2.9493
97 V A -2.0784
98 E A -2.8654
99 K A -3.5517
100 D A -3.7321
101 E A -3.9125
102 E A -3.7730
103 G A -3.2856
104 N A -2.1945
105 I A 0.0000
106 I A 0.1104
107 S A -0.7011
108 V A -1.3184
109 D A -2.5324
110 V A 0.0000
111 P A -1.9756
112 E A -2.5727
113 S A -2.0231
114 T A -2.3127
115 I A 0.0000
116 K A -3.6409
117 E A -3.7452
118 L A 0.0000
119 E A -2.8955
120 K A -2.9640
121 I A -1.7794
122 A A -1.5276
123 N A -1.6386
124 M A -1.7246
125 E A -2.4868
126 A A 0.0000
127 L A 0.0000
128 E A -3.0576
129 H A -2.2118
130 Y A 0.0000
131 R A -2.1333
132 K A -2.4110
133 I A 0.0000
134 Y A 0.0000
135 S A -1.8459
136 D A -2.0171
137 W A 0.0000
138 K A -1.9274
139 E A -2.5729
140 R A -2.1995
141 G A -1.6938
142 K A -1.2948
143 T A -0.5950
144 F A 0.0000
145 I A 0.0000
146 L A 0.0000
147 N A 0.0000
148 L A 0.0000
149 Y A 0.0000
150 H A 0.0000
151 W A 0.1109
152 P A 0.0000
153 L A 0.0000
154 P A 0.0000
155 L A 0.1756
156 W A 0.2007
157 I A 0.0000
158 H A 0.0000
159 D A -0.3733
160 P A 0.0000
161 I A 0.0211
162 A A -0.2185
163 V A 0.0000
164 R A 0.0000
165 K A -0.4643
166 L A -0.4726
167 G A 0.0000
168 P A -1.2424
169 D A -2.4845
170 R A -1.8132
171 A A -1.1611
172 P A -1.0614
173 A A 0.0000
174 G A 0.0000
175 W A 0.0000
176 L A 0.0000
177 D A -2.0023
178 E A -3.0615
179 K A -1.7256
180 T A 0.0000
181 V A 0.0000
182 V A -0.9434
183 E A 0.0000
184 F A 0.0000
185 V A 0.0000
186 K A 0.0000
187 F A 0.0000
188 A A 0.0000
189 A A 0.0000
190 F A 0.0000
191 V A 0.0000
192 A A 0.0000
193 Y A -0.1303
194 H A -0.5007
195 L A 0.0000
196 D A -1.5907
197 D A -2.0425
198 L A 0.0000
199 V A 0.0000
200 D A -1.1766
201 M A -0.6828
202 W A 0.0000
203 S A 0.0000
204 T A 0.0000
205 M A 0.0000
206 N A 0.0000
207 E A -0.1823
208 P A 0.0000
209 N A -0.7612
210 V A -0.2863
211 V A 0.0000
212 Y A 0.0000
213 N A -0.6041
214 Q A -0.7454
215 G A 0.0000
216 Y A 0.0000
217 I A 0.3799
218 N A -0.3626
219 L A -0.5618
220 R A -1.2000
221 S A -0.7916
222 G A 0.0000
223 F A 0.0000
224 P A 0.0000
225 P A 0.0000
226 G A -0.1557
227 Y A 0.1771
228 L A 0.0000
229 S A 0.0000
230 F A 0.5241
231 E A -1.7382
232 A A 0.0000
233 A A 0.0000
234 E A -2.4505
235 K A -2.1638
236 A A 0.0000
237 K A -1.4712
238 F A -0.7454
239 N A -0.8852
240 L A 0.0000
241 I A 0.1856
242 Q A 0.0000
243 A A 0.0000
244 H A 0.0000
245 I A 0.0000
246 G A 0.0000
247 A A 0.0000
248 Y A 0.0000
249 D A -2.0496
250 A A 0.0000
251 I A 0.0000
252 K A -2.1035
253 E A -2.2767
254 Y A -1.1751
255 S A -1.8769
256 E A -2.5338
257 K A -1.7227
258 S A -1.0481
259 V A 0.0000
260 G A 0.0000
261 V A 0.0000
262 I A 0.0000
263 Y A 0.0000
264 A A -0.0411
265 F A 0.0000
266 A A -0.1193
267 W A 0.0000
268 H A 0.0000
269 D A -0.3264
270 P A -1.1274
271 L A 0.5241
272 A A -1.0105
273 E A -3.0408
274 E A -3.3355
275 Y A -2.7214
276 K A -3.9885
277 D A -4.4102
278 E A -3.9496
279 V A 0.0000
280 E A -3.7693
281 E A -4.3749
282 I A -3.1698
283 R A 0.0000
284 K A -4.0544
285 K A -4.1147
286 D A -3.5950
287 Y A 0.0000
288 E A -3.0011
289 F A 0.0000
290 V A 0.0000
291 T A -1.1110
292 I A -0.3034
293 L A 0.0000
294 H A -1.1572
295 S A -1.0699
296 K A -1.8941
297 G A -1.5197
298 K A -1.3053
299 L A 0.0000
300 D A -0.7066
301 W A 0.0000
302 I A 0.0000
303 G A 0.0000
304 V A 0.0000
305 N A 0.0000
306 Y A 0.0000
307 Y A 0.0000
308 S A 0.0000
309 R A 0.1338
310 L A 0.6968
311 V A 0.0000
312 Y A 0.0000
313 G A 0.0000
314 A A -1.0992
315 K A -2.6392
316 D A -3.0172
317 G A -2.0678
318 H A -1.6185
319 L A -0.4081
320 V A 1.1351
321 P A 1.0516
322 L A 0.8478
323 P A -0.3595
324 G A -0.5224
325 Y A 0.0129
326 G A 0.0000
327 F A 0.7911
328 M A 0.2115
329 S A -0.8769
330 E A -2.3907
331 R A -2.5783
332 G A -1.4002
333 G A -0.6987
334 F A 0.3601
335 A A 0.0000
336 K A -1.6937
337 S A -0.7688
338 G A -0.6199
339 R A -0.2032
340 P A 0.0000
341 A A 0.0000
342 S A 0.0000
343 D A -1.6701
344 F A -0.8967
345 G A 0.0000
346 W A 0.0606
347 E A 0.0000
348 M A 0.0000
349 Y A -0.0845
350 P A 0.0000
351 E A -0.8895
352 G A 0.0000
353 L A 0.0000
354 E A -1.2551
355 N A -1.2020
356 L A 0.0000
357 L A 0.0000
358 K A -2.2509
359 Y A -1.1700
360 L A 0.0000
361 N A -2.1913
362 N A -2.0358
363 A A -1.3780
364 Y A 0.0000
365 E A -2.5153
366 L A -1.3492
367 P A -1.1203
368 M A 0.0000
369 I A 0.0000
370 I A 0.0000
371 T A 0.0000
372 E A 0.0000
373 N A 0.0000
374 G A 0.0000
375 M A 0.0000
376 A A 0.0000
377 D A 0.0000
378 A A -0.3179
379 A A 0.0000
380 D A 0.0000
381 R A -0.6578
382 Y A -0.1662
383 R A 0.0000
384 P A 0.0000
385 H A -0.1626
386 Y A 0.0000
387 L A 0.0000
388 V A 0.0000
389 S A 0.0000
390 H A 0.0000
391 L A 0.0000
392 K A -0.9062
393 A A 0.0000
394 V A 0.0000
395 Y A -1.2105
396 N A -1.6914
397 A A 0.0000
398 M A -2.1693
399 K A -2.9493
400 E A -3.1523
401 G A -2.7214
402 A A 0.0000
403 D A -2.3332
404 V A 0.0000
405 R A -1.5337
406 G A 0.0000
407 Y A 0.0000
408 L A 0.0000
409 H A 0.0000
410 W A 0.0000
411 S A 0.0000
412 L A 0.0000
413 T A 0.0000
414 D A 0.0000
415 N A 0.0000
416 Y A 0.0000
417 E A -0.6105
418 W A 0.0000
419 A A -0.5074
420 Q A -1.0386
421 G A 0.0000
422 F A -0.7996
423 R A -1.9312
424 M A 0.0000
425 R A -0.5837
426 F A 0.0000
427 G A 0.0000
428 L A 0.0000
429 V A 0.0000
430 Y A 0.0000
431 V A 0.0000
432 D A -1.4024
433 F A 0.0000
434 E A -2.2854
435 T A -1.5641
436 K A 0.0000
437 K A -2.0956
438 R A -1.0611
439 Y A -0.7980
440 L A 0.0000
441 R A 0.0000
442 P A 0.0000
443 S A 0.0000
444 A A 0.0000
445 L A 0.0000
446 V A 0.0000
447 F A 0.0000
448 R A -0.9193
449 E A -0.6185
450 I A 0.0000
451 A A 0.0000
452 T A -1.0424
453 Q A -1.5219
454 K A -1.8430
455 E A -1.8515
456 I A 0.0000
457 P A -1.6834
458 E A -2.3421
459 E A -2.0824
460 L A 0.0000
461 A A -1.1835
462 H A -1.2466
463 L A -0.4604
464 A A 0.0000
465 D A -1.5053
466 L A 0.0000
467 K A -1.4997
468 F A 0.1571
469 V A 0.0183
470 T A -0.2777
1 A B -0.8711
2 K B -2.2592
3 F B 0.0000
4 P B -1.9825
5 K B -2.7414
6 N B -2.4255
7 F B 0.0000
8 M B 0.0000
9 F B 0.0000
10 G B 0.0000
11 Y B 0.0000
12 S B 0.0000
13 W B 0.0000
14 S B 0.0000
15 G B -0.0318
16 F B 0.0000
17 Q B 0.0000
18 F B 0.0000
19 E B 0.0000
20 M B 0.0000
21 G B 0.0000
22 L B -0.5312
23 P B -0.8927
24 G B -1.0651
25 S B 0.0000
26 E B -2.4398
27 V B -1.5799
28 E B -1.8232
29 S B 0.0000
30 D B 0.0000
31 W B 0.0000
32 W B 0.0000
33 V B -0.3081
34 W B 0.0000
35 V B 0.0000
36 H B -1.6002
37 D B -1.5555
38 K B -2.0992
39 E B -0.7425
40 N B 0.0000
41 I B -0.6452
42 A B -0.3374
43 S B 0.0000
44 G B -0.6465
45 L B 0.0000
46 V B 0.0000
47 S B -0.7945
48 G B -1.1552
49 D B -1.1780
50 L B -1.0692
51 P B 0.0000
52 E B -2.3007
53 N B -1.7432
54 G B 0.0000
55 P B 0.0000
56 A B 0.0000
57 Y B 0.0000
58 W B 0.0000
59 H B -0.7531
60 L B -0.8638
61 Y B 0.0000
62 K B -2.1621
63 Q B -2.4998
64 D B 0.0000
65 H B 0.0000
66 D B -3.0478
67 I B -1.7618
68 A B 0.0000
69 E B -2.3299
70 K B -2.0703
71 L B 0.0000
72 G B -1.3759
73 M B 0.0000
74 D B -0.9654
75 C B 0.0000
76 I B 0.0000
77 R B 0.0000
78 G B 0.0000
79 G B 0.0000
80 I B 0.0000
81 E B 0.0000
82 W B 0.0000
83 A B 0.0000
84 R B 0.0000
85 I B 0.0000
86 F B 0.0000
87 P B -0.8455
88 K B -0.9436
89 P B -0.3214
90 T B 0.0000
91 F B 0.4911
92 D B -1.4407
93 V B 0.0000
94 K B -2.1554
95 V B -1.6659
96 D B -2.9443
97 V B -1.9631
98 E B -3.1391
99 K B -3.9056
100 D B -4.0617
101 E B -3.9779
102 E B -3.7490
103 G B -3.1361
104 N B -2.4322
105 I B 0.0000
106 I B -0.3866
107 S B -1.3783
108 V B -1.8673
109 D B -2.8771
110 V B 0.0000
111 P B -2.2625
112 E B -2.5907
113 S B -2.2248
114 T B -2.7810
115 I B 0.0000
116 K B -3.8758
117 E B -4.0802
118 L B 0.0000
119 E B -3.4286
120 K B -3.1945
121 I B -2.0034
122 A B 0.0000
123 N B -1.6969
124 M B -1.7911
125 E B -2.4111
126 A B -1.7815
127 L B 0.0000
128 E B -2.9704
129 H B -2.2270
130 Y B 0.0000
131 R B -2.1840
132 K B -2.4039
133 I B 0.0000
134 Y B 0.0000
135 S B -1.5836
136 D B 0.0000
137 W B 0.0000
138 K B -1.8416
139 E B -2.4257
140 R B -2.1594
141 G B -1.5571
142 K B -1.4656
143 T B -0.6572
144 F B 0.0000
145 I B 0.0000
146 L B 0.0000
147 N B 0.0000
148 L B 0.0000
149 Y B 0.0000
150 H B -0.0396
151 W B 0.0899
152 P B 0.0000
153 L B 0.0000
154 P B 0.0000
155 L B 0.4961
156 W B 0.3195
157 I B 0.0000
158 H B 0.0000
159 D B -0.0858
160 P B 0.0000
161 I B 0.0000
162 A B -0.1274
163 V B 0.0000
164 R B 0.0000
165 K B -0.0230
166 L B 0.0532
167 G B 0.0000
168 P B -1.3633
169 D B -2.2896
170 R B -1.6859
171 A B -1.1353
172 P B -0.9928
173 A B 0.0000
174 G B 0.0000
175 W B 0.0000
176 L B 0.0000
177 D B -2.6772
178 E B -2.7987
179 K B -1.9630
180 T B 0.0000
181 V B 0.0000
182 V B -0.0936
183 E B 0.0000
184 F B 0.0000
185 V B 0.0000
186 K B 0.0000
187 F B 0.0000
188 A B 0.0000
189 A B 0.0000
190 F B 0.0000
191 V B 0.0000
192 A B 0.0000
193 Y B 0.2787
194 H B -0.2039
195 L B 0.0000
196 D B -1.3321
197 D B -1.8814
198 L B -1.3899
199 V B 0.0000
200 D B -1.2473
201 M B -0.7484
202 W B 0.0000
203 S B 0.0000
204 T B 0.0000
205 M B 0.0786
206 N B 0.0000
207 E B -0.1850
208 P B 0.0000
209 N B -0.5734
210 V B 0.0000
211 V B 0.0000
212 Y B -0.9676
213 N B -0.8463
214 Q B -1.0193
215 G B 0.0000
216 Y B 0.0000
217 I B -0.3548
218 N B -1.0968
219 L B 0.0000
220 R B -1.2625
221 S B -0.8757
222 G B 0.0000
223 F B 0.0000
224 P B 0.0000
225 P B 0.0000
226 G B 0.0000
227 Y B 0.0000
228 L B 0.0000
229 S B 0.0000
230 F B -1.0009
231 E B -2.2865
232 A B 0.0000
233 A B 0.0000
234 E B -2.5757
235 K B -2.2502
236 A B 0.0000
237 K B -1.0279
238 F B -0.0542
239 N B 0.0000
240 L B 0.0000
241 I B 0.4458
242 Q B 0.3619
243 A B 0.0000
244 H B 0.0000
245 I B 0.0000
246 G B 0.0000
247 A B 0.0000
248 Y B -0.4816
249 D B -1.1314
250 A B 0.0000
251 I B 0.0000
252 K B -2.0194
253 E B -2.6856
254 Y B -1.2286
255 S B 0.0000
256 E B -2.5482
257 K B -1.7398
258 S B -1.0247
259 V B 0.0000
260 G B 0.0000
261 V B 0.0000
262 I B 0.0000
263 Y B 0.0000
264 A B -0.0474
265 F B 0.0000
266 A B 0.0368
267 W B 0.0000
268 H B 0.0000
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234 E D -2.2313
235 K D -2.1424
236 A D 0.0000
237 K D -0.6729
238 F D 0.5556
239 N D 0.0000
240 L D 0.0000
241 I D 0.0000
242 Q D 0.0187
243 A D 0.0000
244 H D 0.0000
245 I D 0.0000
246 G D 0.0000
247 A D 0.0000
248 Y D -0.5280
249 D D -1.1347
250 A D 0.0000
251 I D 0.0000
252 K D -2.0914
253 E D -2.5648
254 Y D -1.4765
255 S D 0.0000
256 E D -2.5747
257 K D -1.8632
258 S D -1.2123
259 V D 0.0000
260 G D 0.0000
261 V D 0.0000
262 I D 0.0000
263 Y D 0.0000
264 A D -0.0033
265 F D 0.0000
266 A D -0.0121
267 W D -0.2517
268 H D 0.0000
269 D D 0.0027
270 P D -0.8223
271 L D 0.6261
272 A D -1.0406
273 E D -3.1981
274 E D -3.3729
275 Y D -2.6919
276 K D -3.6049
277 D D -4.0835
278 E D -3.8735
279 V D 0.0000
280 E D -2.9446
281 E D -3.4279
282 I D -2.5486
283 R D 0.0000
284 K D -3.5668
285 K D -4.0334
286 D D -3.5672
287 Y D 0.0000
288 E D -3.1880
289 F D 0.0000
290 V D 0.0000
291 T D -1.1847
292 I D -0.1935
293 L D 0.0000
294 H D -1.1390
295 S D -0.7937
296 K D -1.2137
297 G D -1.2738
298 K D -1.1341
299 L D 0.0000
300 D D -0.7957
301 W D 0.0000
302 I D 0.0000
303 G D 0.0000
304 V D 0.0000
305 N D 0.0000
306 Y D 0.0000
307 Y D 0.3787
308 S D 0.0000
309 R D 0.0000
310 L D 0.7657
311 V D 0.0000
312 Y D 0.0000
313 G D 0.0000
314 A D -1.5249
315 K D -2.8395
316 D D -3.0409
317 G D -2.4776
318 H D -2.1699
319 L D -1.0060
320 V D -0.4889
321 P D 0.2280
322 L D 0.4535
323 P D -0.1992
324 G D -0.5034
325 Y D -0.0565
326 G D 0.0000
327 F D 1.1794
328 M D 0.2943
329 S D -0.9439
330 E D -2.4389
331 R D -2.5443
332 G D -1.3066
333 G D -0.7211
334 F D -0.0071
335 A D 0.0000
336 K D -1.7986
337 S D -0.8563
338 G D -0.4622
339 R D -0.4092
340 P D 0.0000
341 A D 0.0000
342 S D 0.0000
343 D D -1.5466
344 F D -0.6186
345 G D 0.0000
346 W D 0.3001
347 E D 0.0000
348 M D 0.0000
349 Y D -0.0931
350 P D -0.8010
351 E D -1.0387
352 G D 0.0000
353 L D 0.0000
354 E D -1.1255
355 N D -1.1335
356 L D 0.0000
357 L D 0.0000
358 K D -1.6300
359 Y D -0.8846
360 L D 0.0000
361 N D -2.0174
362 N D -1.8692
363 A D -1.2532
364 Y D 0.0000
365 E D -2.3659
366 L D -1.2064
367 P D -1.1262
368 M D 0.0000
369 I D 0.0000
370 I D 0.0000
371 T D 0.0000
372 E D 0.0000
373 N D 0.0000
374 G D 0.0000
375 M D 0.0000
376 A D 0.0000
377 D D -0.9182
378 A D -0.7553
379 A D 0.0000
380 D D 0.0000
381 R D -0.4677
382 Y D 0.0000
383 R D 0.0000
384 P D 0.0000
385 H D 0.0000
386 Y D 0.0000
387 L D 0.0000
388 V D 0.0000
389 S D 0.0000
390 H D 0.0000
391 L D 0.0000
392 K D -1.0767
393 A D 0.0000
394 V D 0.0000
395 Y D -1.0623
396 N D -1.4664
397 A D 0.0000
398 M D -1.8228
399 K D -2.7121
400 E D -2.9820
401 G D -2.0615
402 A D 0.0000
403 D D -1.9784
404 V D 0.0000
405 R D -1.8069
406 G D 0.0000
407 Y D 0.0000
408 L D 0.0000
409 H D 0.0000
410 W D 0.0000
411 S D 0.0000
412 L D 0.0000
413 T D 0.0000
414 D D 0.0000
415 N D 0.0000
416 Y D 0.0000
417 E D -0.4211
418 W D -0.2160
419 A D -0.4293
420 Q D -0.8598
421 G D -0.9772
422 F D -0.9402
423 R D -1.9458
424 M D 0.0000
425 R D -0.8466
426 F D 0.0000
427 G D 0.0000
428 L D 0.0000
429 V D 0.0000
430 Y D -0.2687
431 V D 0.0000
432 D D -1.4474
433 F D 0.0000
434 E D -2.3356
435 T D -1.6176
436 K D 0.0000
437 K D -2.3090
438 R D -1.2611
439 Y D -0.8961
440 L D -0.2201
441 R D 0.0000
442 P D 0.0000
443 S D 0.0000
444 A D 0.0000
445 L D 0.0000
446 V D 0.0000
447 F D 0.0000
448 R D -0.9863
449 E D -0.7229
450 I D 0.0000
451 A D 0.0000
452 T D -1.1640
453 Q D -1.5818
454 K D -1.9360
455 E D -2.2023
456 I D 0.0000
457 P D 0.0000
458 E D -2.4896
459 E D -1.7323
460 L D 0.0000
461 A D -1.1696
462 H D -1.0195
463 L D 0.0000
464 A D -1.1981
465 D D -2.2521
466 L D 0.0000
467 K D -2.1201
468 F D -0.8859
469 V D 0.0000
470 T D -0.5926
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Calculations for various pH values

This page contains details and comparisons for all models calculated at different pH points.
Please find suggestions on interpreting the results below. More details can be found in the Tutorial.
The input structure is globular. Max score is recommended for pH analysis.

pH
Average A4D Score
Max A4D Score
4.0 -0.597 3.5166 View CSV PDB
4.5 -0.673 3.3101 View CSV PDB
5.0 -0.7687 3.0736 View CSV PDB
5.5 -0.8665 3.0221 View CSV PDB
6.0 -0.9466 2.9747 View CSV PDB
6.5 -0.9929 2.9393 View CSV PDB
7.0 -1.0018 2.9196 View CSV PDB
7.5 -0.9838 2.9113 View CSV PDB
8.0 -0.9508 2.9084 View CSV PDB
8.5 -0.9083 2.9074 View CSV PDB
9.0 -0.857 2.907 View CSV PDB