Chain sequence(s) |
A: MEVTSQSTLPPGFRFHPTDEELIVYYLRNQTMSKPCPVSIIPEVDIYKFDPWQLPEKTEFGENEWYFFSPRERKYPNGVRPNRAAVSGYWKATGTDKAIHSGSSNVGVKKALVFYKGRPPKGIKTDWIMHEYRLHDSRKASTKRNGSMRLDEWVLCRIYKKRGASKLLNEQEGFMDEVLMEDETKVVVNEAERRTEEEIMMMTSMKLPRTCSLAHLLEMDYMGPVSHIDNFSQFDHLHQPDSESSWFGDLQFNQDEILNHHRQAMFKF
input PDB |
Selected Chain(s) | A |
Distance of aggregation | 10 Å |
FoldX usage | No |
pH calculations | No |
alphaCutter usage | No |
Dynamic mode | No |
Automated mutations | No |
Downloads | Download all the data |
Simulation log |
[INFO] Logger: Verbosity set to: 2 - [INFO] (00:00:00) [WARNING] runJob: Working directory already exists (possibly overwriting previous results -ow to prevent this behavior) (00:00:00) [INFO] runJob: Starting aggrescan3d job on: input.pdb with A chain(s) selected (00:00:00) [INFO] runJob: Creating pdb object from: input.pdb (00:00:00) [INFO] runJob: FoldX not utilized. Treating input pdb file as it was already optimized. (00:00:00) [INFO] Analysis: Starting Aggrescan4D on folded.pdb (00:00:01) [INFO] Main: Simulation completed successfully. (00:00:02) |
The table below lists A4D score for protein residues. Residues with A4D score > 0.0000 are marked by yellow rows.
residue index | residue name | chain | Aggrescan4D score | mutation |
---|---|---|---|---|
1 | M | A | 0.6421 | |
2 | E | A | -0.4961 | |
3 | V | A | 0.8926 | |
4 | T | A | -0.2980 | |
5 | S | A | -0.6046 | |
6 | Q | A | -1.1068 | |
7 | S | A | -0.8476 | |
8 | T | A | -0.3709 | |
9 | L | A | -0.0048 | |
10 | P | A | -0.4026 | |
11 | P | A | -0.3694 | |
12 | G | A | 0.0184 | |
13 | F | A | 0.0439 | |
14 | R | A | -0.5617 | |
15 | F | A | -0.1878 | |
16 | H | A | -0.4721 | |
17 | P | A | 0.0000 | |
18 | T | A | -0.6397 | |
19 | D | A | -0.9988 | |
20 | E | A | -1.0191 | |
21 | E | A | 0.0000 | |
22 | L | A | 0.0000 | |
23 | I | A | 0.0000 | |
24 | V | A | -0.0826 | |
25 | Y | A | -0.0657 | |
26 | Y | A | 0.0000 | |
27 | L | A | 0.0000 | |
28 | R | A | -0.8130 | |
29 | N | A | -0.9668 | |
30 | Q | A | -1.0627 | |
31 | T | A | -0.7499 | |
32 | M | A | -0.4239 | |
33 | S | A | -0.8867 | |
34 | K | A | -1.6912 | |
35 | P | A | -0.8854 | |
36 | C | A | -0.4051 | |
37 | P | A | 0.3393 | |
38 | V | A | 0.5749 | |
39 | S | A | 0.1079 | |
40 | I | A | 0.0698 | |
41 | I | A | 0.0000 | |
42 | P | A | -1.1513 | |
43 | E | A | -1.9166 | |
44 | V | A | -1.2339 | |
45 | D | A | -1.2469 | |
46 | I | A | 0.0000 | |
47 | Y | A | 0.0000 | |
48 | K | A | -1.1702 | |
49 | F | A | -0.0544 | |
50 | D | A | 0.0000 | |
51 | P | A | 0.0000 | |
52 | W | A | -0.1429 | |
53 | Q | A | -1.0422 | |
54 | L | A | 0.0000 | |
55 | P | A | -1.8430 | |
56 | E | A | -2.5523 | |
57 | K | A | -2.1741 | |
58 | T | A | -1.6955 | |
59 | E | A | -2.0450 | |
60 | F | A | -0.7822 | |
61 | G | A | -1.7860 | |
62 | E | A | -2.7566 | |
63 | N | A | -2.9409 | |
64 | E | A | -1.8029 | |
65 | W | A | -1.2443 | |
66 | Y | A | 0.0000 | |
67 | F | A | 0.0000 | |
68 | F | A | 0.0000 | |
69 | S | A | 0.0000 | |
70 | P | A | -1.4071 | |
71 | R | A | -2.0522 | |
72 | E | A | -2.3027 | |
73 | R | A | -1.8042 | |
74 | K | A | -1.5432 | |
75 | Y | A | 0.0396 | |
76 | P | A | -0.7799 | |
77 | N | A | -1.0553 | |
78 | G | A | -0.3887 | |
79 | V | A | 0.2459 | |
80 | R | A | -1.5940 | |
81 | P | A | -1.5987 | |
82 | N | A | -1.4419 | |
83 | R | A | -1.5106 | |
84 | A | A | -0.5547 | |
85 | A | A | 0.0106 | |
86 | V | A | 1.2373 | |
87 | S | A | -0.0842 | |
88 | G | A | -0.7214 | |
89 | Y | A | -0.7903 | |
90 | W | A | 0.0000 | |
91 | K | A | -1.7378 | |
92 | A | A | -0.9797 | |
93 | T | A | -0.7682 | |
94 | G | A | -0.9147 | |
95 | T | A | -1.1019 | |
96 | D | A | -1.6779 | |
97 | K | A | -2.2587 | |
98 | A | A | -1.4207 | |
99 | I | A | 0.0000 | |
100 | H | A | -1.6606 | |
101 | S | A | -1.0449 | |
102 | G | A | -1.0220 | |
103 | S | A | -0.8273 | |
104 | S | A | -0.9640 | |
105 | N | A | -1.2905 | |
106 | V | A | -0.9890 | |
107 | G | A | 0.0000 | |
108 | V | A | -1.0584 | |
109 | K | A | -1.1114 | |
110 | K | A | -1.0978 | |
111 | A | A | -0.9168 | |
112 | L | A | 0.0000 | |
113 | V | A | 0.0000 | |
114 | F | A | 0.0000 | |
115 | Y | A | -1.5880 | |
116 | K | A | -1.6057 | |
117 | G | A | -1.7450 | |
118 | R | A | -2.6243 | |
119 | P | A | -2.0043 | |
120 | P | A | -1.4540 | |
121 | K | A | -2.4090 | |
122 | G | A | -1.6081 | |
123 | I | A | -0.0255 | |
124 | K | A | -1.6554 | |
125 | T | A | -1.5905 | |
126 | D | A | -2.9619 | |
127 | W | A | 0.0000 | |
128 | I | A | -1.0917 | |
129 | M | A | 0.0000 | |
130 | H | A | -0.3186 | |
131 | E | A | 0.0000 | |
132 | Y | A | 0.0000 | |
133 | R | A | -0.8325 | |
134 | L | A | -0.8959 | |
135 | H | A | -2.1203 | |
136 | D | A | -3.2454 | |
137 | S | A | -2.4877 | |
138 | R | A | -3.3758 | |
139 | K | A | -3.4724 | |
140 | A | A | -1.9278 | |
141 | S | A | -1.7581 | |
142 | T | A | -2.3185 | |
143 | K | A | -3.5231 | |
144 | R | A | -3.6568 | |
145 | N | A | -2.8787 | |
146 | G | A | -2.1972 | |
147 | S | A | -2.2064 | |
148 | M | A | -1.6283 | |
149 | R | A | -2.9142 | |
150 | L | A | -1.6876 | |
151 | D | A | -2.1769 | |
152 | E | A | -1.8571 | |
153 | W | A | -1.2360 | |
154 | V | A | 0.0000 | |
155 | L | A | 0.0000 | |
156 | C | A | 0.0000 | |
157 | R | A | -0.2950 | |
158 | I | A | 0.0000 | |
159 | Y | A | -2.0093 | |
160 | K | A | -3.4297 | |
161 | K | A | -3.9636 | |
162 | R | A | -3.7409 | |
163 | G | A | -2.3625 | |
164 | A | A | -0.7637 | |
165 | S | A | -0.7203 | |
166 | K | A | -1.7152 | |
167 | L | A | 0.2122 | |
168 | L | A | 0.0632 | |
169 | N | A | -2.3883 | |
170 | E | A | -2.9477 | |
171 | Q | A | -2.4897 | |
172 | E | A | -2.4731 | |
173 | G | A | -1.3310 | |
174 | F | A | 0.8757 | |
175 | M | A | 0.5159 | |
176 | D | A | -1.4103 | |
177 | E | A | -1.2644 | |
178 | V | A | 1.5473 | |
179 | L | A | 2.0828 | |
180 | M | A | 0.9569 | |
181 | E | A | -2.2561 | |
182 | D | A | -3.3785 | |
183 | E | A | -3.4364 | |
184 | T | A | -1.8786 | |
185 | K | A | -0.8090 | |
186 | V | A | 2.1458 | |
187 | V | A | 2.8886 | |
188 | V | A | 1.9760 | |
189 | N | A | -0.8914 | |
190 | E | A | -2.4008 | |
191 | A | A | -2.4134 | |
192 | E | A | -3.5113 | |
193 | R | A | -3.9032 | |
194 | R | A | -3.9887 | |
195 | T | A | -2.9281 | |
196 | E | A | -3.1147 | |
197 | E | A | -2.7509 | |
198 | E | A | -1.6080 | |
199 | I | A | 1.2316 | |
200 | M | A | 1.4103 | |
201 | M | A | 1.7843 | |
202 | M | A | 2.1838 | |
203 | T | A | 1.2513 | |
204 | S | A | 0.6138 | |
205 | M | A | 0.7043 | |
206 | K | A | -0.8108 | |
207 | L | A | 0.3997 | |
208 | P | A | -0.6518 | |
209 | R | A | -1.6731 | |
210 | T | A | -0.3523 | |
211 | C | A | 0.4985 | |
212 | S | A | 0.6400 | |
213 | L | A | 2.0703 | |
214 | A | A | 0.9642 | |
215 | H | A | 0.5033 | |
216 | L | A | 1.8171 | |
217 | L | A | 1.4072 | |
218 | E | A | -0.7202 | |
219 | M | A | 0.4830 | |
220 | D | A | -0.3616 | |
221 | Y | A | 0.9542 | |
222 | M | A | 1.1975 | |
223 | G | A | 0.4534 | |
224 | P | A | 0.6681 | |
225 | V | A | 1.4356 | |
226 | S | A | 0.4743 | |
227 | H | A | -0.0472 | |
228 | I | A | 0.4907 | |
229 | D | A | -1.2565 | |
230 | N | A | -0.8804 | |
231 | F | A | 0.4976 | |
232 | S | A | 0.1593 | |
233 | Q | A | -0.4690 | |
234 | F | A | 0.1540 | |
235 | D | A | -1.1478 | |
236 | H | A | -0.7918 | |
237 | L | A | -0.0771 | |
238 | H | A | -1.0896 | |
239 | Q | A | -1.9100 | |
240 | P | A | -2.0731 | |
241 | D | A | -2.6358 | |
242 | S | A | -2.0918 | |
243 | E | A | -2.3159 | |
244 | S | A | -1.0334 | |
245 | S | A | 0.2838 | |
246 | W | A | 1.4681 | |
247 | F | A | 2.0020 | |
248 | G | A | 0.1446 | |
249 | D | A | -0.7799 | |
250 | L | A | 0.6056 | |
251 | Q | A | -0.5970 | |
252 | F | A | 0.2734 | |
253 | N | A | -1.7141 | |
254 | Q | A | -2.2638 | |
255 | D | A | -2.8838 | |
256 | E | A | -2.6377 | |
257 | I | A | -0.7213 | |
258 | L | A | -0.9641 | |
259 | N | A | -2.5298 | |
260 | H | A | -1.9098 | |
261 | H | A | -1.3846 | |
262 | R | A | -2.3334 | |
263 | Q | A | -2.0452 | |
264 | A | A | -1.1507 | |
265 | M | A | -0.5023 | |
266 | F | A | 0.5373 | |
267 | K | A | -0.2876 | |
268 | F | A | 1.4397 |