Project name: MAPK6_FL-5A

Status: done

Started: 2026-03-27 17:06:27
Chain sequence(s) A: MAEKFESLMNIHGFDLGSRYMDLKPLGCGGNGLVFSAVDNDCDKRVAIKKIVLTDPQSVKHALREIKIIRRLDHDNIVKVFEILGPSGSQLTDDVGSLTELNSVYIVQEYMETDLANVLEQGPLLEEHARLFMYQLLRGLKYIHSANVLHRDLKPANLFINTEDLVLKIGDFGLARIMDPHYSHKGHLSEGLVTKWYRSPRLLLSPNNYTKAIDMWAAGCIFAEMLTGKTLFAGAHELEQMQLILESIPVVHEEDRQELLSVIPVYIRNDMTEPHKPLTQLLPGISREALDFLEQILTFSPMDRLTAEEALSHPYMSIYSFPMDEPISSHPFHIEDEVDDILLMDETHSHIYNWERYHDCQFSEHDWPVHNNFDIDEVQLDPRALSDVTDEEEVQVDPRKYLDGDREKYLEDPAFDTNYSTEPCWQYSDHHENKYCDLECSHTCNYKTRSSSYLDNLVWRESEVNHYYEPKLIIDLSNWKEQSKEKSDKKGKSKCERNGLVKAQIALEEASQQLAGKEREKNQGFDFDSFIAGTIQLSSQHEPTDVVDKLNDLNSSVSQLELKSLISKSVSQEKQEKGMANLAQLEALYQSSWDSQFVSGGEDCFFINQFCEVRKDEQVEKENTYTSYLDKFFSRKEDTEMLETEPVEDGKLGERGHEEGFLNNSGEFLFNKQLESIGIPQFHSPVGSPLKSIQATLTPSAMKSSPQIPHQTYSSILKHLN
input PDB
Selected Chain(s) A
Distance of aggregation 5 Å
FoldX usage Yes
pH calculations Yes
alphaCutter usage No
Dynamic mode No
Automated mutations No
Downloads Download all the data
Simulation log
[INFO]       Logger:   Verbosity set to: 2 - [INFO]                                                (00:00:01)
[WARNING]    runJob:   Working directory already exists (possibly overwriting previous results -ow 
                       to prevent this behavior)                                                   (00:00:01)
[INFO]       runJob:   Starting aggrescan3d job on: input.pdb with A chain(s) selected             (00:00:01)
[INFO]       runJob:   Creating pdb object from: input.pdb                                         (00:00:01)
[INFO]       PDB-Info: The input structure is partially or entirely disordered. Average score is   
                       recommended for pH analysis.                                                (00:00:04)
[INFO]       FoldX:    Starting FoldX energy minimization                                          (00:00:05)
[INFO]       Analysis: Starting Aggrescan4D on folded.pdb                                          (00:13:39)
[INFO]       agg3D:    Running pKa-ANI on                                                          
                       /STORAGE/DATA/lcbio/aggreskan/48e82a071cf6cec/tmp/folded.pdb                (00:13:39)
[INFO]       Main:     Simulation completed successfully.                                          (00:18:52)
Show buried residues

Minimal score value
-2.503
Maximal score value
2.6943
Average score
-0.3528
Total score value
-254.3653

The table below lists A4D score for protein residues. Residues with A4D score > 0.0000 are marked by yellow rows.

residue index residue name chain Aggrescan4D score mutation
1 M A 1.0638
2 A A -0.0432
3 E A -2.1135
4 K A -1.9716
5 F A -0.2952
6 E A -1.7851
7 S A -0.3903
8 L A 0.5214
9 M A 0.0065
10 N A -0.8788
11 I A 1.7425
12 H A -0.1037
13 G A -0.4396
14 F A -0.0058
15 D A -0.9616
16 L A 0.0000
17 G A -0.5410
18 S A -0.4129
19 R A -0.6919
20 Y A 0.0000
21 M A 0.7201
22 D A -0.6851
23 L A -0.0206
24 K A -1.3353
25 P A -0.2016
26 L A 0.8046
27 G A 0.1190
28 C A 0.6156
29 G A -0.4179
30 G A -0.6961
31 N A -0.9138
32 G A -0.2411
33 L A 0.0000
34 V A 0.4187
35 F A 0.0000
36 S A 0.0000
37 A A 0.0000
38 V A 0.1194
39 D A 0.0000
40 N A -1.2428
41 D A -1.9287
42 C A -0.4937
43 D A -2.0544
44 K A -2.0498
45 R A -0.8852
46 V A 0.0000
47 A A 0.0000
48 I A 0.0000
49 K A 0.0000
50 K A 0.0000
51 I A 0.0000
52 V A 1.0474
53 L A 0.0000
54 T A -0.1930
55 D A -0.7268
56 P A -0.5901
57 Q A -1.3168
58 S A -0.2698
59 V A 0.0543
60 K A -0.7761
61 H A -0.4486
62 A A 0.0000
63 L A 0.0000
64 R A 0.0000
65 E A 0.0000
66 I A 0.1454
67 K A -0.4007
68 I A 0.0000
69 I A 0.0000
70 R A -1.4596
71 R A -1.6511
72 L A 0.0000
73 D A -1.8085
74 H A -0.7500
75 D A -1.8084
76 N A 0.0000
77 I A 0.0000
78 V A 0.0000
79 K A -0.7234
80 V A 0.0000
81 F A 1.3763
82 E A 0.0000
83 I A 0.0000
84 L A 0.0000
85 G A 0.0000
86 P A -0.0879
87 S A -0.4097
88 G A -0.2644
89 S A -0.4099
90 Q A -1.1812
91 L A 0.0257
92 T A -0.3431
93 D A -2.1212
94 D A -2.0664
95 V A -0.1523
96 G A -0.3081
97 S A -0.1283
98 L A 0.0000
99 T A -0.3522
100 E A -1.7739
101 L A -0.2807
102 N A -1.2216
103 S A 0.0000
104 V A 0.0000
105 Y A 0.0000
106 I A 0.0000
107 V A 0.0000
108 Q A -0.1959
109 E A -0.1650
110 Y A 0.5172
111 M A -0.0727
112 E A -1.4926
113 T A -0.3335
114 D A -0.2014
115 L A 0.0000
116 A A -0.1837
117 N A -1.0731
118 V A -0.0281
119 L A 0.0000
120 E A -2.0342
121 Q A -1.5422
122 G A -0.3683
123 P A -0.2830
124 L A 0.0000
125 L A 1.4640
126 E A -0.5033
127 E A -1.9299
128 H A -0.4473
129 A A 0.0000
130 R A -0.2541
131 L A 0.2674
132 F A 0.0000
133 M A 0.0000
134 Y A 0.0000
135 Q A 0.0000
136 L A 0.0000
137 L A 0.0000
138 R A -0.1815
139 G A 0.0000
140 L A 0.0000
141 K A -0.1896
142 Y A 0.0000
143 I A 0.0000
144 H A 0.0000
145 S A -0.0446
146 A A 0.0000
147 N A -0.2695
148 V A 0.0000
149 L A 0.0000
150 H A 0.0000
151 R A 0.0000
152 D A -0.2950
153 L A 0.0000
154 K A -0.2093
155 P A 0.0000
156 A A 0.0330
157 N A 0.0000
158 L A 0.0000
159 F A 0.3263
160 I A 0.0000
161 N A -0.2991
162 T A 0.0000
163 E A -2.1417
164 D A -2.0640
165 L A 0.0469
166 V A 0.4155
167 L A 0.0000
168 K A -0.1809
169 I A 0.0000
170 G A 0.0000
171 D A -0.7694
172 F A 0.0000
173 G A -0.0155
174 L A 0.2842
175 A A 0.0000
176 R A 0.0000
177 I A 0.0000
178 M A 0.1161
179 D A -0.2531
180 P A -0.4736
181 H A -0.7987
182 Y A 1.0980
183 S A 0.0066
184 H A -0.4552
185 K A -1.8050
186 G A -0.9121
187 H A -0.8279
188 L A 0.0438
189 S A -0.4512
190 E A -1.9322
191 G A -0.5165
192 L A 1.5082
193 V A 0.5149
194 T A -0.0066
195 K A -0.1625
196 W A 0.0842
197 Y A 0.0000
198 R A -0.2046
199 S A 0.0000
200 P A 0.0000
201 R A -0.2655
202 L A 0.0000
203 L A 0.0000
204 L A 0.0000
205 S A -0.0344
206 P A -0.1794
207 N A -1.0011
208 N A -1.3802
209 Y A -0.0741
210 T A -0.0822
211 K A -0.5512
212 A A 0.0000
213 I A 0.0000
214 D A 0.0000
215 M A 0.0000
216 W A 0.0000
217 A A 0.0000
218 A A 0.0000
219 G A 0.0000
220 C A 0.0000
221 I A 0.0000
222 F A 0.0000
223 A A 0.0000
224 E A 0.0000
225 M A 0.0000
226 L A 0.1709
227 T A -0.0189
228 G A -0.2657
229 K A -0.9192
230 T A -0.1379
231 L A 0.1903
232 F A 0.0000
233 A A 0.0092
234 G A 0.0000
235 A A -0.0842
236 H A -0.5075
237 E A -0.6934
238 L A 0.0000
239 E A -0.7218
240 Q A 0.0000
241 M A 0.0000
242 Q A -0.2559
243 L A 0.3940
244 I A 0.0000
245 L A 0.0000
246 E A -1.0697
247 S A 0.0000
248 I A 0.0000
249 P A -0.0632
250 V A 0.0000
251 V A 1.6834
252 H A -0.4366
253 E A -1.8947
254 E A -2.0804
255 D A 0.0000
256 R A -0.5289
257 Q A -1.1399
258 E A -0.5399
259 L A 0.0000
260 L A 0.2184
261 S A -0.1086
262 V A 0.1360
263 I A 0.0000
264 P A 0.1343
265 V A 1.9074
266 Y A 1.3454
267 I A 0.1770
268 R A -1.2758
269 N A -1.7964
270 D A -2.0214
271 M A 0.0000
272 T A -0.4016
273 E A -1.8363
274 P A -0.5296
275 H A -1.1905
276 K A -1.2854
277 P A -0.2852
278 L A 0.0000
279 T A -0.2864
280 Q A -1.1433
281 L A 0.1617
282 L A 0.0000
283 P A -0.3391
284 G A -0.4609
285 I A 0.1920
286 S A -0.3428
287 R A -2.1864
288 E A -2.1556
289 A A 0.0000
290 L A 0.0000
291 D A -1.4680
292 F A 0.0000
293 L A 0.0000
294 E A -1.5796
295 Q A -0.7939
296 I A 0.0000
297 L A 0.0000
298 T A -0.0091
299 F A 0.0000
300 S A 0.0000
301 P A 0.0000
302 M A 0.8126
303 D A -1.1468
304 R A 0.0000
305 L A 0.1757
306 T A 0.0049
307 A A 0.0000
308 E A -1.4922
309 E A -1.6691
310 A A 0.0000
311 L A 0.0000
312 S A -0.2129
313 H A 0.0000
314 P A -0.2549
315 Y A 0.0000
316 M A 0.0000
317 S A 0.1471
318 I A 2.0275
319 Y A 0.6428
320 S A 0.3176
321 F A 1.7732
322 P A 0.2604
323 M A 0.7238
324 D A -1.3803
325 E A 0.0000
326 P A 0.2286
327 I A 1.9864
328 S A 0.0000
329 S A -0.3122
330 H A -0.6366
331 P A -0.3545
332 F A 0.0000
333 H A -0.9293
334 I A -0.2753
335 E A -1.8428
336 D A -0.9653
337 E A -0.2143
338 V A -0.1323
339 D A -1.7493
340 D A -0.3244
341 I A 0.7107
342 L A 1.7001
343 L A 1.2422
344 M A 0.0000
345 D A -2.1154
346 E A -2.1485
347 T A -0.4334
348 H A -0.4032
349 S A -0.4152
350 H A -0.6628
351 I A 2.0745
352 Y A 1.4409
353 N A -0.8047
354 W A 0.6127
355 E A -1.9475
356 R A -1.9438
357 Y A 0.7904
358 H A -1.0803
359 D A -1.8352
360 C A 0.1674
361 Q A -0.7059
362 F A 1.6801
363 S A -0.1905
364 E A -2.0511
365 H A -1.6699
366 D A -1.7559
367 W A 0.8154
368 P A 0.2841
369 V A 1.5440
370 H A -0.9038
371 N A -1.6921
372 N A -1.1093
373 F A 1.3495
374 D A -1.0559
375 I A 1.3464
376 D A -1.7374
377 E A -1.8038
378 V A 1.2108
379 Q A -0.5975
380 L A 1.1436
381 D A -0.8308
382 P A -0.7699
383 R A -1.8790
384 A A -0.0006
385 L A 1.5192
386 S A -0.2528
387 D A -1.5063
388 V A 1.4349
389 T A -0.0626
390 D A -2.1420
391 E A -2.4887
392 E A -2.4863
393 E A -1.8273
394 V A 1.4021
395 Q A 0.4342
396 V A 1.7354
397 D A 0.0000
398 P A -0.2884
399 R A -0.5364
400 K A -1.4982
401 Y A 1.1798
402 L A 0.8630
403 D A -1.7030
404 G A -1.1059
405 D A -2.2064
406 R A -2.5030
407 E A -2.4723
408 K A -1.7872
409 Y A 1.2814
410 L A 1.4536
411 E A -1.8593
412 D A -2.1660
413 P A -0.5624
414 A A 0.3670
415 F A 1.6146
416 D A -1.4365
417 T A -0.6484
418 N A -1.0365
419 Y A 1.0338
420 S A 0.0149
421 T A -0.4377
422 E A -1.8812
423 P A -0.4664
424 C A 0.9006
425 W A 1.0995
426 Q A -0.7321
427 Y A 1.0505
428 S A -0.3490
429 D A -2.0157
430 H A -1.5007
431 H A -1.5074
432 E A -2.2324
433 N A -1.9146
434 K A -1.6902
435 Y A 1.1343
436 C A 0.6435
437 D A -1.3711
438 L A 0.8871
439 E A -1.4043
440 C A 0.3624
441 S A -0.2597
442 H A -1.0416
443 T A -0.1196
444 C A 0.4862
445 N A -0.9001
446 Y A 0.7701
447 K A -1.4705
448 T A -0.7264
449 R A -1.8967
450 S A -0.5936
451 S A -0.2903
452 S A -0.0113
453 Y A 1.5516
454 L A 1.4623
455 D A -1.7399
456 N A -1.3146
457 L A 1.6362
458 V A 2.2582
459 W A 1.1582
460 R A -1.9632
461 E A -2.1918
462 S A -0.8195
463 E A -1.5226
464 V A 1.2057
465 N A -1.1293
466 H A -0.9804
467 Y A 1.3727
468 Y A 1.2261
469 E A -1.6279
470 P A -0.8887
471 K A -1.6375
472 L A 0.6569
473 I A 2.1795
474 I A 0.3632
475 D A -1.6614
476 L A 0.0316
477 S A -0.3588
478 N A -1.2017
479 W A 0.0703
480 K A -1.9170
481 E A -2.3379
482 Q A -1.5611
483 S A -0.7286
484 K A -2.0760
485 E A -2.4450
486 K A -2.0705
487 S A -0.8636
488 D A -2.1608
489 K A -2.3571
490 K A -2.0931
491 G A -1.0656
492 K A -1.6889
493 S A -0.6770
494 K A -1.5837
495 C A 0.1028
496 E A -2.0199
497 R A -2.3764
498 N A -1.5294
499 G A -0.2534
500 L A 1.7133
501 V A 1.2043
502 K A -1.4731
503 A A -0.2978
504 Q A -0.5772
505 I A 1.3526
506 A A 0.5985
507 L A 1.1234
508 E A -1.8910
509 E A -2.2588
510 A A -0.3203
511 S A -0.6043
512 Q A -1.6329
513 Q A -1.1406
514 L A 1.3351
515 A A 0.1616
516 G A -0.4842
517 K A -2.0372
518 E A -2.4509
519 R A -2.4914
520 E A -2.4629
521 K A -2.2698
522 N A -1.8127
523 Q A -1.5245
524 G A -0.3296
525 F A 1.5326
526 D A -1.0865
527 F A 1.2953
528 D A -1.4795
529 S A -0.2632
530 F A 1.5890
531 I A 1.0943
532 A A 0.1597
533 G A -0.2521
534 T A 0.2774
535 I A 1.7901
536 Q A -0.5578
537 L A 1.2949
538 S A 0.0297
539 S A -0.4332
540 Q A -1.4083
541 H A -1.5293
542 E A -2.0421
543 P A -0.5945
544 T A -0.4334
545 D A -1.6449
546 V A 0.7444
547 V A 0.8450
548 D A -1.8971
549 K A -1.7862
550 L A 0.4952
551 N A -1.5701
552 D A -1.7386
553 L A 1.0852
554 N A -1.0650
555 S A -0.4720
556 S A -0.0266
557 V A 0.7795
558 S A -0.1767
559 Q A -0.9444
560 L A 1.0056
561 E A -1.2649
562 L A 0.9188
563 K A -1.4620
564 S A -0.2441
565 L A 1.8744
566 I A 2.2536
567 S A -0.1553
568 K A -1.7782
569 S A -0.2105
570 V A 1.6969
571 S A -0.0175
572 Q A -1.0410
573 E A -2.2452
574 K A -2.2362
575 Q A -1.7938
576 E A -2.3289
577 K A -2.0713
578 G A -0.4240
579 M A 0.9439
580 A A -0.0220
581 N A -0.9998
582 L A 1.3278
583 A A 0.1218
584 Q A -0.9232
585 L A 0.4494
586 E A -1.6354
587 A A 0.0084
588 L A 1.7919
589 Y A 1.3760
590 Q A -1.0052
591 S A -0.4917
592 S A -0.0277
593 W A 0.8212
594 D A -1.6050
595 S A -0.7343
596 Q A -0.8705
597 F A 2.0455
598 V A 2.0913
599 S A 0.0285
600 G A -0.6238
601 G A -0.9259
602 E A -2.2453
603 D A -1.9904
604 C A 0.7347
605 F A 2.4351
606 F A 2.6943
607 I A 2.1606
608 N A -1.1305
609 Q A -1.0832
610 F A 1.8759
611 C A 0.8018
612 E A -1.3641
613 V A 1.1043
614 R A -1.8327
615 K A -2.3730
616 D A -2.4403
617 E A -2.3668
618 Q A -1.2022
619 V A 1.2198
620 E A -1.8118
621 K A -2.3697
622 E A -2.3628
623 N A -1.6171
624 T A -0.0668
625 Y A 1.2941
626 T A 0.1717
627 S A -0.0195
628 Y A 0.6052
629 L A 0.2884
630 D A -1.4079
631 K A -1.6580
632 F A 0.3553
633 F A 0.8471
634 S A -0.4013
635 R A -2.1935
636 K A -2.3763
637 E A -2.4682
638 D A -2.1400
639 T A -0.7336
640 E A -1.6392
641 M A 1.0014
642 L A 1.4114
643 E A -1.5532
644 T A -0.7304
645 E A -1.8781
646 P A -0.2591
647 V A 1.3945
648 E A -1.8240
649 D A -2.2080
650 G A -1.0990
651 K A -1.5019
652 L A 1.1232
653 G A -0.4159
654 E A -2.2461
655 R A -2.2689
656 G A -0.9959
657 H A -1.4369
658 E A -2.3486
659 E A -2.2373
660 G A -0.4391
661 F A 2.1396
662 L A 1.6711
663 N A -1.2238
664 N A -1.5478
665 S A -0.5359
666 G A -0.8405
667 E A -1.5479
668 F A 1.8894
669 L A 2.2563
670 F A 1.9893
671 N A -1.2409
672 K A -2.1637
673 Q A -1.2239
674 L A 0.9864
675 E A -1.5721
676 S A -0.1828
677 I A 1.8884
678 G A 0.2680
679 I A 1.8826
680 P A -0.1180
681 Q A -0.9024
682 F A 1.5471
683 H A -0.6731
684 S A -0.4464
685 P A 0.0325
686 V A 1.6411
687 G A -0.1823
688 S A -0.3427
689 P A -0.0115
690 L A 1.1903
691 K A -1.4566
692 S A -0.1690
693 I A 1.7628
694 Q A -0.8326
695 A A -0.1658
696 T A 0.2208
697 L A 1.5219
698 T A 0.1659
699 P A -0.3064
700 S A -0.2486
701 A A 0.2099
702 M A 0.7545
703 K A -1.5470
704 S A -0.5606
705 S A -0.2972
706 P A -0.5101
707 Q A -0.8798
708 I A 1.7500
709 P A -0.0749
710 H A -1.2489
711 Q A -1.3783
712 T A -0.0752
713 Y A 0.8846
714 S A 0.0278
715 S A 0.1278
716 I A 1.9192
717 L A 1.5427
718 K A -1.6006
719 H A -1.0189
720 L A 1.1416
721 N A -0.9945
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Calculations for various pH values

This page contains details and comparisons for all models calculated at different pH points.
Please find suggestions on interpreting the results below. More details can be found in the Tutorial.
The input structure is partially or entirely disordered. Average score is recommended for pH analysis.

pH
Average A4D Score
Max A4D Score
4.0 -0.11 5.5407 View CSV PDB
4.5 -0.164 5.5407 View CSV PDB
5.0 -0.2318 5.5407 View CSV PDB
5.5 -0.3012 5.5407 View CSV PDB
6.0 -0.3596 5.5407 View CSV PDB
6.5 -0.3987 5.5407 View CSV PDB
7.0 -0.4188 5.5407 View CSV PDB
7.5 -0.4264 5.5407 View CSV PDB
8.0 -0.4273 5.5407 View CSV PDB
8.5 -0.4229 5.5407 View CSV PDB
9.0 -0.4119 5.5407 View CSV PDB