Project name: CSCCluster

Status: done

Started: 2026-03-10 03:44:40
Chain sequence(s) A: KVVDEPTSAMQDITTNFEQRTIGRVPWPITHIAANYVRDGHMTHKTSRVKITLGKGVVHSPNGKGLYNLWDLVLNRQGKEYGATFLAYNINNRVWRPHRTDTIKTHGIKAGQPVWIGNKSSTNASSNPIRTLPAYMVTKQYCQMVSQIKLSPHITGFEANKRIITGTGTQGGDLITAKFGNQIKKTRVDHEGRWQMKCFSGNGHLMVTETNAYDDIPGHTETVINNGTPRTDATIKLNLFLTNGHTFSTAKGRKVLVTGMILGTDQNDFDRDVVLKNNALTIHFAHADGTPIANYKANGSVNEPDKAGYFHLKLPTESLKQGPNDVKVWVSDQHGQRSNIDTLTVNVNSGLMFGQINAQMRFRSNTIPHSERLLSPTNQWQIEVHDTRSVASKWYVYATATKMKSAQHSLIGDLVYIDAAGQKHVMTNQETLVGHGTHTNSNQQTTNIAATWQARQGIFLDVQPELYAGSYHGKINWSLQDTPQS
C: NRQQSVHNNNVGFSVAAEIPKNQIHKQNSFFDLKMASGQQQTLRTVIYNVTNKDIKVRTAIHTAYTNTNGTIEYINPAKSYDQSLKYRVSDLATIQGERTITIPAEGSKTVAIKVKLPKQPVNGVLLGGWYFKRVDDKVTGVTEKSINVKNEYSYVIGLKLSSGKLPIPNLCLGPVKAGLNNYHRSIIVALRNPVARIIPNLKIRTVIINKRHQKVIIKNTKTGVMMAPNTVFKAPMPLGSQQLQPGDYQLQMTVNNQRHHWRFKRDFHISMTAAQKYNHESIDNKGVSMWMLIGIGAISMLVLGLGLGVIVWLWRRQRRSKD
B: VGGRSTVTVSFYAGQRTQQQIDNRNVKIPNGTRPYRVVTEKTLTRPKGYYQLPQTDEQLLTWFYASFGSVLLILLMVIRWFNKESYC
D: DTPAAPNADSTANTTGTTDIQAMFKGNSSPVSPVNPDNPNKPDNSGDSGNGAKAGGGLSLIYVSNKLDFGSHEIDVLNPETYTAAETDSDLSGLWNKKAVTEVSDVRGSNAGWTLAVAGSSLTGTDGSVMKGATLQLPKGTVTNSGATNNGVQSTEALNVLDGNSATVLSAAKDHGAGVTVDQIDPSNVKLTVPANTAKAQGYQTTLNWSLSDTPAS
input PDB
Selected Chain(s) A,B,C,D
Distance of aggregation 10 Å
FoldX usage Yes
pH calculations Yes
alphaCutter usage A: KVVDEPTSAMQDITTNFEQRTIGRVPWPITHIAANYVRDGHMTHKTSRVKITLGKGVVHSPNGKGLYNLWDLVLNRQGKEYGATFLAYNINNRVWRPHRTDTIKTHGIKAGQPVWIGNKSSTNASSNPIRTLPAYMVTKQYCQMVSQIKLSPHITGFEANKRIITGTGTQGGDLITAKFGNQIKKTRVDHEGRWQMKCFSGNGHLMVTETNAYDDIPGHTETVINNGTPRTDATIKLNLFLTNGHTFSTAKGRKVLVTGMILGTDQNDFDRDVVLKNNALTIHFAHADGTPIANYKANGSVNEPDKAGYFHLKLPTESLKQGPNDVKVWVSDQHGQRSNIDTLTVNVNSGLMFGQINAQMRFRSNTIPHSERLLSPTNQWQIEVHDTRSVASKWYVYATATKMKSAQHSLIGDLVYIDAAGQKHVMTNQETLVGHGTHTNSNQQTTNIAATWQARQGIFLDVQPELYAGSYHGKINWSLQDTPQS
C: NRQQSVHNNNVGFSVAAEIPKNQIHKQNSFFDLKMASGQQQTLRTVIYNVTNKDIKVRTAIHTAYTNTNGTIEYINPAKSYDQSLKYRVSDLATIQGERTITIPAEGSKTVAIKVKLPKQPVNGVLLGGWYFKRVDDKVTGVTEKSINVKNEYSYVIGLKLSSGKLPIPNLCLGPVKAGLNNYHRSIIVALRNPVARIIPNLKIRTVIINKRHQKVIIKNTKTGVMMAPNTVFKAPMPLGSQQLQPGDYQLQMTVNNQRHHWRFKRDFHISMTAAQKYNHESIDNKGVS

MWMLIGIGAISMLVLGLGLGVIVWLWRRQRRSKD


B:

VGGRSTVTVSFYAGQRTQQQIDNRNVKIPNGTRPYRVVTEKTLTRPKGYYQLPQTDEQLLTWFYASFGSVLLILLMVIRWFNKESYC


D: DTPAAPNADSTANTTGTTDIQAMFKGNSSPVSPVNPDNPNKPDNSGDSGNGAKAGGGLSLIYVSNKLDFGSHEIDVLNPETYTAAETDSDLSGLWNKKAVTEVSDVRGSNAGWTLAVAGSSLTGTDGSVMKGATLQLPKGTVTNSGATNNGVQSTEALNVLDGNSATVLSAAKDHGAGVTVDQIDPSNVKLTVPANTAKAQGYQTTLNWSLSDTPAS
(Red indicates removed residues)
Dynamic mode No
Automated mutations No
Downloads Download all the data
Simulation log
[INFO]       Logger:   Verbosity set to: 2 - [INFO]                                                (00:00:01)
[WARNING]    runJob:   Working directory already exists (possibly overwriting previous results -ow 
                       to prevent this behavior)                                                   (00:00:02)
[INFO]       runJob:   Starting aggrescan3d job on: input.pdb with all chain(s) selected           (00:00:02)
[INFO]       runJob:   Creating pdb object from: input.pdb                                         (00:00:02)
[INFO]       PDB:      Running AlphaCutter                                                         (00:00:02)
[INFO]       PDB-Info: The input structure is globular. Max score is recommended for pH analysis.  (00:00:26)
[INFO]       FoldX:    Starting FoldX energy minimization                                          (00:00:26)
[INFO]       Analysis: Starting Aggrescan4D on folded.pdb                                          (00:20:32)
[INFO]       agg3D:    Running pKa-ANI on                                                          
                       /STORAGE/DATA/lcbio/aggreskan/4b5a6c9b072dd05/tmp/folded.pdb                (00:20:32)
[INFO]       Main:     Simulation completed successfully.                                          (00:29:43)
Show buried residues

Minimal score value
-3.7296
Maximal score value
1.6612
Average score
-0.7988
Total score value
-791.6399

The table below lists A4D score for protein residues. Residues with A4D score > 0.0000 are marked by yellow rows.

residue index residue name chain Aggrescan4D score mutation
1 K A -2.7758
2 V A -2.0231
3 V A 0.0000
4 D A -3.1422
5 E A -2.0568
6 P A 0.0000
7 T A -0.6458
8 S A -0.5882
9 A A -0.2826
10 M A -0.7777
11 Q A -1.5598
12 D A -1.8629
13 I A 0.0000
14 T A -0.9850
15 T A -0.5809
16 N A 0.0000
17 F A 0.0000
18 E A -1.0529
19 Q A -1.2407
20 R A -0.8111
21 T A -0.6603
22 I A 0.0000
23 G A 0.0000
24 R A -1.8032
25 V A 0.0000
26 P A -0.5146
27 W A 0.0000
28 P A -0.6333
29 I A 0.0000
30 T A -0.6892
31 H A -1.1758
32 I A 0.0000
33 A A 0.0000
34 A A 0.0000
35 N A 0.0000
36 Y A -0.4963
37 V A -0.4477
38 R A 0.0000
39 D A -0.9544
40 G A -0.7270
41 H A 0.0000
42 M A 0.0000
43 T A 0.0000
44 H A -1.4844
45 K A -1.5529
46 T A 0.0000
47 S A -2.0693
48 R A -2.8343
49 V A 0.0000
50 K A -1.7165
51 I A 0.0000
52 T A -1.0985
53 L A 0.0000
54 G A -1.6003
55 K A -2.2897
56 G A -0.9434
57 V A 0.4243
58 V A 0.0000
59 H A -1.8042
60 S A 0.0000
61 P A -1.8164
62 N A -2.3284
63 G A -2.3988
64 K A -3.1058
65 G A -2.5857
66 L A 0.0000
67 Y A -0.4484
68 N A 0.3432
69 L A 0.0000
70 W A 0.8276
71 D A 0.0000
72 L A 0.0000
73 V A 0.0000
74 L A 0.0000
75 N A -0.9533
76 R A 0.0000
77 Q A -1.2767
78 G A -1.0969
79 K A -1.6473
80 E A -1.5285
81 Y A 0.0000
82 G A -1.4672
83 A A -0.2773
84 T A 0.2220
85 F A 1.2727
86 L A 0.0000
87 A A 0.6125
88 Y A 0.7107
89 N A -0.9271
90 I A 0.0000
91 N A -2.4647
92 N A -2.6821
93 R A -3.4885
94 V A -1.6390
95 W A -1.3008
96 R A -1.9034
97 P A 0.0000
98 H A -2.1837
99 R A -1.6876
100 T A -0.9655
101 D A -0.6387
102 T A -1.1826
103 I A 0.0000
104 K A -2.7652
105 T A 0.0000
106 H A -2.2723
107 G A -1.4787
108 I A 0.0000
109 K A -1.8598
110 A A 0.0000
111 G A 0.0000
112 Q A -0.6791
113 P A -0.3324
114 V A 0.0000
115 W A 0.0000
116 I A 0.0000
117 G A 0.0000
118 N A 0.0000
119 K A 0.2666
120 S A 0.0000
121 S A 0.0000
122 T A 0.0000
123 N A -0.5227
124 A A -0.2857
125 S A -0.2063
126 S A -0.7285
127 N A -1.0431
128 P A -0.0450
129 I A 0.9447
130 R A -0.9267
131 T A -0.2461
132 L A 1.3003
133 P A 0.0000
134 A A 0.0000
135 Y A 0.4612
136 M A 0.0000
137 V A 0.0981
138 T A 0.0000
139 K A 0.0000
140 Q A 0.0000
141 Y A -0.3848
142 C A 0.0000
143 Q A 0.0000
144 M A -0.1472
145 V A 0.0000
146 S A 0.0000
147 Q A -0.5588
148 I A 0.0000
149 K A -0.7247
150 L A 0.0000
151 S A -0.4978
152 P A 0.0000
153 H A -0.8136
154 I A 0.0000
155 T A 0.0000
156 G A -0.9937
157 F A -1.2775
158 E A -2.2342
159 A A -1.6807
160 N A -2.4216
161 K A -2.8965
162 R A -2.4210
163 I A -1.9662
164 I A 0.0000
165 T A 0.0000
166 G A 0.0000
167 T A -0.6067
168 G A 0.0000
169 T A 0.0000
170 Q A 0.0000
171 G A 0.0000
172 G A -1.9377
173 D A 0.0000
174 L A -0.9845
175 I A 0.0000
176 T A 0.0000
177 A A 0.0000
178 K A -0.9322
179 F A 0.0000
180 G A -1.4853
181 N A -1.5427
182 Q A -0.9152
183 I A 0.3971
184 K A -0.9946
185 K A -2.1925
186 T A -2.3329
187 R A -2.7773
188 V A 0.0000
189 D A -3.3017
190 H A -3.4318
191 E A -3.5109
192 G A 0.0000
193 R A 0.0000
194 W A 0.0000
195 Q A -2.0427
196 M A 0.0000
197 K A -2.6181
198 C A 0.0000
199 F A 0.0000
200 S A -1.3871
201 G A -1.8909
202 N A -2.6041
203 G A -1.7785
204 H A -1.8461
205 L A 0.0000
206 M A -0.8586
207 V A 0.0000
208 T A -0.8897
209 E A 0.0000
210 T A -0.5328
211 N A -0.5120
212 A A -0.4368
213 Y A 0.0000
214 D A -1.0910
215 D A 0.0000
216 I A -0.1382
217 P A -0.5537
218 G A 0.0000
219 H A -1.4853
220 T A -1.3413
221 E A -2.3314
222 T A -1.8313
223 V A -1.6519
224 I A 0.0000
225 N A -2.8946
226 N A -2.4359
227 G A 0.0000
228 T A -1.6644
229 P A 0.0000
230 R A -2.5698
231 T A -1.8868
232 D A -2.3638
233 A A -1.4764
234 T A -0.8352
235 I A -0.3307
236 K A -0.8760
237 L A 0.0000
238 N A 0.0000
239 L A 0.0000
240 F A 0.0000
241 L A 0.0000
242 T A 0.0000
243 N A 0.0000
244 G A 0.0000
245 H A 0.0000
246 T A -0.3475
247 F A 0.0000
248 S A -0.2366
249 T A 0.0000
250 A A 0.0000
251 K A -2.2002
252 G A -1.6792
253 R A 0.0000
254 K A -1.5884
255 V A 0.0000
256 L A -0.3309
257 V A 0.0000
258 T A 0.0000
259 G A 0.0000
260 M A 0.0000
261 I A 0.0000
262 L A -0.2395
263 G A 0.0000
264 T A -1.0088
265 D A -1.4436
266 Q A 0.0000
267 N A -2.2444
268 D A -2.7306
269 F A -1.6004
270 D A -3.5854
271 R A -3.7296
272 D A -2.8866
273 V A -0.8680
274 V A 0.6416
275 L A -0.1629
276 K A -2.2215
277 N A 0.0000
278 N A -2.6025
279 A A -2.0778
280 L A 0.0000
281 T A -1.4770
282 I A 0.0000
283 H A -0.6077
284 F A 0.0000
285 A A 0.0000
286 H A -1.3397
287 A A -1.5972
288 D A -2.2626
289 G A -1.4072
290 T A -0.9138
291 P A -0.8118
292 I A -0.4731
293 A A -0.6206
294 N A -1.3654
295 Y A -1.2178
296 K A -2.1001
297 A A 0.0000
298 N A -2.0590
299 G A 0.0000
300 S A -1.2090
301 V A -0.6294
302 N A -1.3810
303 E A -2.1571
304 P A -2.0349
305 D A -3.0796
306 K A -2.3108
307 A A -1.2788
308 G A 0.0000
309 Y A -0.8480
310 F A 0.0000
311 H A -0.5811
312 L A 0.0000
313 K A -1.0829
314 L A 0.0000
315 P A -1.0125
316 T A 0.0000
317 E A -2.1081
318 S A -1.4572
319 L A 0.0000
320 K A -2.4565
321 Q A -1.7000
322 G A 0.0000
323 P A -0.9971
324 N A 0.0000
325 D A -1.6814
326 V A 0.0000
327 K A -0.8273
328 V A 0.0000
329 W A -0.0804
330 V A 0.0000
331 S A -1.7541
332 D A -2.3982
333 Q A -2.5921
334 H A -2.2419
335 G A -2.0490
336 Q A -2.0796
337 R A -2.3138
338 S A 0.0000
339 N A -0.1388
340 I A 0.8015
341 D A 0.0000
342 T A -0.2891
343 L A 0.0000
344 T A -0.6447
345 V A 0.0000
346 N A 0.0000
347 V A 0.0000
348 N A 0.0000
349 S A 0.0000
350 G A -0.5485
351 L A 0.0000
352 M A 0.0000
353 F A 0.0000
354 G A 0.0000
355 Q A 0.0000
356 I A 0.0000
357 N A -0.3381
358 A A 0.0000
359 Q A -0.7199
360 M A 0.0000
361 R A -1.0645
362 F A 0.0000
363 R A -2.1089
364 S A -1.5327
365 N A -1.1721
366 T A -1.1657
367 I A 0.0000
368 P A 0.0000
369 H A -1.1204
370 S A 0.0000
371 E A -1.9419
372 R A -1.6088
373 L A -0.2647
374 L A 0.0000
375 S A -0.7089
376 P A -0.5756
377 T A -0.7268
378 N A 0.0000
379 Q A -0.5988
380 W A 0.0000
381 Q A 0.0000
382 I A 0.0000
383 E A 0.0000
384 V A 0.0000
385 H A 0.0000
386 D A 0.0000
387 T A -0.8007
388 R A -0.7112
389 S A -0.2949
390 V A 0.7445
391 A A 0.2181
392 S A -0.2260
393 K A -0.7933
394 W A 0.0000
395 Y A -0.3962
396 V A 0.0000
397 Y A 0.0000
398 A A 0.0000
399 T A 0.0000
400 A A 0.0000
401 T A -1.0917
402 K A -1.1646
403 M A 0.0000
404 K A -2.0479
405 S A -1.6423
406 A A -1.2742
407 Q A -1.5881
408 H A -1.2004
409 S A -1.0630
410 L A 0.0000
411 I A 0.1512
412 G A 0.0000
413 D A 0.0000
414 L A 0.0000
415 V A 0.0000
416 Y A 0.0000
417 I A 0.0000
418 D A -1.1674
419 A A -0.9033
420 A A -0.7437
421 G A -1.3856
422 Q A -1.2883
423 K A -1.0383
424 H A -0.5709
425 V A -0.2878
426 M A 0.0000
427 T A -0.8114
428 N A -1.4213
429 Q A 0.0000
430 E A 0.0000
431 T A 0.0000
432 L A 0.2626
433 V A 0.0000
434 G A -0.4093
435 H A -1.0520
436 G A -0.8121
437 T A -0.3119
438 H A 0.0000
439 T A -0.5568
440 N A -1.2704
441 S A -1.3028
442 N A -1.8416
443 Q A -1.5072
444 Q A -1.0119
445 T A -0.3424
446 T A -0.3629
447 N A -0.2747
448 I A 0.0000
449 A A 0.0000
450 A A -0.4041
451 T A -0.3394
452 W A -0.9307
453 Q A -1.9021
454 A A -1.5765
455 R A -2.4067
456 Q A -1.7722
457 G A 0.0000
458 I A 0.0000
459 F A 0.0000
460 L A 0.0000
461 D A 0.0000
462 V A 0.0000
463 Q A 0.0000
464 P A 0.0000
465 E A -0.6457
466 L A 0.0000
467 Y A -0.6631
468 A A -0.7998
469 G A -1.2776
470 S A -1.2562
471 Y A 0.0000
472 H A -1.0895
473 G A 0.0000
474 K A -1.0302
475 I A 0.0000
476 N A 0.0000
477 W A 0.0000
478 S A 0.0000
479 L A 0.0000
480 Q A 0.0000
481 D A 0.0000
482 T A 0.0000
483 P A 0.0000
484 Q A -0.6519
485 S A -0.6139
1 N C -2.4414
2 R C -2.9407
3 Q C -2.4287
4 Q C -1.6250
5 S C -0.7955
6 V C 0.0488
7 H C 0.0000
8 N C 0.0000
9 N C 0.0000
10 N C -0.4287
11 V C 0.0000
12 G C 0.0000
13 F C 0.0000
14 S C 0.0000
15 V C 0.0000
16 A C -0.5919
17 A C -1.0197
18 E C -2.0868
19 I C -1.1964
20 P C -1.3832
21 K C -2.1540
22 N C -1.5229
23 Q C 0.0000
24 I C -1.2065
25 H C -1.8486
26 K C -2.6487
27 Q C -2.0171
28 N C -1.5578
29 S C -1.1106
30 F C 0.0000
31 F C 0.0000
32 D C 0.0000
33 L C 0.0000
34 K C -1.9213
35 M C 0.0000
36 A C -1.3631
37 S C -1.6903
38 G C -1.9408
39 Q C -1.6485
40 Q C -2.0145
41 Q C -1.4009
42 T C -1.1568
43 L C 0.0000
44 R C -2.1416
45 T C 0.0000
46 V C -0.9077
47 I C 0.0000
48 Y C 0.0000
49 N C 0.0000
50 V C 0.0000
51 T C -1.6889
52 N C -2.4683
53 K C -2.7056
54 D C -2.9983
55 I C 0.0000
56 K C -1.9116
57 V C 0.0000
58 R C -2.1924
59 T C 0.0000
60 A C 0.0000
61 I C 0.0000
62 H C -0.6526
63 T C 0.0000
64 A C 0.0000
65 Y C 0.2159
66 T C 0.0000
67 N C 0.0000
68 T C -0.3469
69 N C -0.3896
70 G C 0.0000
71 T C 0.0000
72 I C 0.0000
73 E C 0.0000
74 Y C 0.0000
75 I C 0.0000
76 N C -0.8483
77 P C -0.9357
78 A C -1.0890
79 K C -1.8081
80 S C -0.9962
81 Y C -0.6114
82 D C 0.0000
83 Q C -1.4193
84 S C -0.8924
85 L C -1.0229
86 K C -1.9387
87 Y C -1.4249
88 R C -1.8448
89 V C 0.0000
90 S C -1.2518
91 D C -2.2049
92 L C -1.4821
93 A C 0.0000
94 T C -0.7571
95 I C -0.9541
96 Q C -1.6899
97 G C -1.9732
98 E C -3.1027
99 R C -3.0333
100 T C -2.1610
101 I C 0.0000
102 T C -1.4449
103 I C 0.0000
104 P C -1.7361
105 A C -2.0995
106 E C -1.7561
107 G C -1.2485
108 S C -0.7647
109 K C -0.9007
110 T C -1.0055
111 V C 0.0000
112 A C -1.4320
113 I C 0.0000
114 K C -1.3733
115 V C 0.0000
116 K C -2.1781
117 L C 0.0000
118 P C -1.6343
119 K C -2.4732
120 Q C -1.9135
121 P C -1.6379
122 V C 0.0000
123 N C -1.8567
124 G C 0.0000
125 V C 0.0000
126 L C 0.0000
127 L C 0.0000
128 G C 0.0000
129 G C 0.0000
130 W C 0.0000
131 Y C 0.0000
132 F C 0.0000
133 K C -0.8917
134 R C -1.1843
135 V C -1.3912
136 D C -2.4122
137 D C -2.6661
138 K C -2.0162
139 V C 0.3967
140 T C 0.1319
141 G C 0.3285
142 V C 1.0551
143 T C -0.4570
144 E C -1.7009
145 K C -1.3889
146 S C 0.0000
147 I C 0.0000
148 N C -0.9132
149 V C 0.0000
150 K C -0.6819
151 N C 0.0000
152 E C -0.6316
153 Y C 0.0000
154 S C 0.0000
155 Y C 0.0000
156 V C 0.0000
157 I C 0.0000
158 G C 0.0000
159 L C 0.0000
160 K C 0.0000
161 L C 0.0000
162 S C 0.0000
163 S C 0.0000
164 G C -1.8380
165 K C -1.7109
166 L C -0.0617
167 P C 0.3612
168 I C 1.6612
169 P C 0.0000
170 N C -0.6523
171 L C 0.0000
172 C C -0.1026
173 L C 0.0000
174 G C -0.3353
175 P C -0.7165
176 V C -1.1847
177 K C -1.7043
178 A C 0.0000
179 G C 0.0000
180 L C 0.2315
181 N C -0.0574
182 N C -0.0981
183 Y C 0.0722
184 H C -0.4535
185 R C -0.5677
186 S C 0.0000
187 I C 0.0000
188 I C -0.5022
189 V C 0.0000
190 A C 0.0000
191 L C 0.0000
192 R C -0.4381
193 N C 0.0000
194 P C -0.3803
195 V C 0.1076
196 A C -0.4474
197 R C -0.2944
198 I C 0.0000
199 I C 0.0000
200 P C -1.4223
201 N C -2.0680
202 L C 0.0000
203 K C -2.4376
204 I C 0.0000
205 R C -2.7624
206 T C 0.0000
207 V C -0.9053
208 I C 0.0000
209 I C -1.4282
210 N C 0.0000
211 K C -3.1318
212 R C -3.4076
213 H C -3.2233
214 Q C -3.1281
215 K C -2.7013
216 V C -0.9453
217 I C -0.5203
218 I C 0.0000
219 K C -1.8860
220 N C -1.5587
221 T C -1.6294
222 K C -1.3030
223 T C -1.4059
224 G C -1.3397
225 V C 0.0000
226 M C -0.6292
227 M C 0.0000
228 A C 0.0000
229 P C 0.0000
230 N C 0.0000
231 T C 0.0000
232 V C -0.0633
233 F C 0.0000
234 K C -0.8113
235 A C 0.0000
236 P C 0.0000
237 M C 0.0000
238 P C -0.6572
239 L C 0.0000
240 G C -1.0348
241 S C -1.2736
242 Q C -1.6046
243 Q C -1.9931
244 L C 0.0000
245 Q C -1.1550
246 P C -0.6024
247 G C -1.0171
248 D C -1.9772
249 Y C 0.0000
250 Q C -1.8544
251 L C 0.0000
252 Q C -2.1447
253 M C 0.0000
254 T C -1.9567
255 V C 0.0000
256 N C -2.4566
257 N C -2.4672
258 Q C -2.7698
259 R C -2.8294
260 H C -2.1430
261 H C -2.2897
262 W C -1.3708
263 R C -2.4992
264 F C -1.6858
265 K C -2.8532
266 R C -2.4040
267 D C -2.8299
268 F C -2.0059
269 H C -1.6888
270 I C 0.0000
271 S C -0.4403
272 M C 0.2872
273 T C -0.2294
274 A C -0.9812
275 A C 0.0000
276 Q C -1.7664
277 K C -2.0971
278 Y C -1.3919
279 N C -1.7034
280 H C -2.0830
281 E C -2.3777
282 S C -1.7058
283 I C -2.4523
284 D C -3.3815
285 N C -3.0172
286 K C -2.5692
287 G C -1.1865
288 V C 0.8031
289 S C 0.2142
1 D D -1.8872
2 T D -1.0380
3 P D -0.7818
4 A D -0.5719
5 A D -0.4494
6 P D -1.1044
7 N D -1.9369
8 A D -1.5827
9 D D -2.3030
10 S D -1.6218
11 T D -1.3175
12 A D -1.2631
13 N D -1.5694
14 T D -1.1299
15 T D -1.0099
16 G D -0.6796
17 T D -0.4426
18 T D 0.0000
19 D D -0.7314
20 I D 0.0000
21 Q D -1.2419
22 A D 0.0000
23 M D -1.1916
24 F D 0.0000
25 K D -1.9587
26 G D -1.3690
27 N D -1.0751
28 S D -0.8450
29 S D -0.6055
30 P D -0.7567
31 V D 0.0000
32 S D -1.1319
33 P D 0.0000
34 V D 0.0000
35 N D -2.3142
36 P D 0.0000
37 D D -2.7007
38 N D -2.4910
39 P D 0.0000
40 N D -2.2323
41 K D -2.6522
42 P D -1.7692
43 D D -1.9879
44 N D -2.1365
45 S D -1.6029
46 G D 0.0000
47 D D -2.4293
48 S D -1.3924
49 G D 0.0000
50 N D -1.8914
51 G D -1.7934
52 A D -1.3779
53 K D -1.9744
54 A D -1.0003
55 G D -0.7580
56 G D -0.5543
57 G D -0.4263
58 L D -0.2773
59 S D -0.3898
60 L D -0.1456
61 I D 0.0000
62 Y D 0.0000
63 V D 0.0000
64 S D -1.1615
65 N D -1.9428
66 K D -1.4487
67 L D -0.5828
68 D D -1.1682
69 F D -0.7774
70 G D -1.2908
71 S D -1.3493
72 H D -1.5888
73 E D -1.7904
74 I D -0.5191
75 D D -0.1167
76 V D 1.3011
77 L D 1.3070
78 N D -0.6765
79 P D -0.9496
80 E D -1.3640
81 T D -0.6896
82 Y D -0.5824
83 T D -0.7668
84 A D 0.0000
85 A D -1.3567
86 E D -1.2766
87 T D -1.2207
88 D D -2.2452
89 S D -1.5156
90 D D -1.3704
91 L D -1.0776
92 S D -0.9687
93 G D 0.0000
94 L D -1.5200
95 W D 0.0000
96 N D -2.4477
97 K D -2.6821
98 K D -2.0558
99 A D -1.2655
100 V D 0.0000
101 T D 0.0000
102 E D 0.0000
103 V D 0.0000
104 S D 0.0000
105 D D 0.0000
106 V D 0.0000
107 R D -0.8784
108 G D 0.0000
109 S D -1.0733
110 N D 0.0000
111 A D -1.6485
112 G D 0.0000
113 W D 0.0000
114 T D -0.5953
115 L D 0.0000
116 A D -0.1998
117 V D 0.0000
118 A D -1.2038
119 G D 0.0000
120 S D -1.3215
121 S D -1.3154
122 L D 0.0000
123 T D -0.9483
124 G D 0.0000
125 T D -1.4880
126 D D -2.1551
127 G D -1.2593
128 S D -0.8954
129 V D -0.4642
130 M D 0.0000
131 K D -1.9575
132 G D -1.4332
133 A D 0.0000
134 T D -0.5925
135 L D 0.0000
136 Q D -0.4982
137 L D 0.0000
138 P D 0.0000
139 K D -2.8549
140 G D 0.0000
141 T D -0.5408
142 V D -0.1192
143 T D -0.4509
144 N D -0.5533
145 S D 0.0000
146 G D -0.9562
147 A D -0.5715
148 T D -0.5199
149 N D -0.5589
150 N D 0.0000
151 G D 0.0000
152 V D 0.0000
153 Q D -1.1085
154 S D -1.3849
155 T D -1.5916
156 E D -2.1710
157 A D 0.0000
158 L D 0.7097
159 N D -0.3618
160 V D 0.0000
161 L D 0.0000
162 D D -2.3293
163 G D -1.9271
164 N D -1.7820
165 S D -1.2381
166 A D -0.4900
167 T D -0.3497
168 V D 0.0000
169 L D 0.0000
170 S D -0.7567
171 A D 0.0000
172 A D -1.5188
173 K D -2.8911
174 D D -2.7363
175 H D -1.6673
176 G D 0.0000
177 A D 0.0000
178 G D 0.0000
179 V D 0.0000
180 T D 0.0000
181 V D 0.0000
182 D D 0.0000
183 Q D 0.0000
184 I D 0.0000
185 D D -2.4064
186 P D 0.0000
187 S D -1.5906
188 N D -2.0642
189 V D 0.0000
190 K D -0.7620
191 L D -0.4500
192 T D -0.5374
193 V D 0.0000
194 P D -0.8714
195 A D -0.3275
196 N D -0.6458
197 T D -0.9840
198 A D -1.2032
199 K D -2.2182
200 A D -1.0864
201 Q D -1.2206
202 G D -1.2750
203 Y D -1.0361
204 Q D -1.2842
205 T D -0.8154
206 T D -0.7766
207 L D -0.7432
208 N D -1.2242
209 W D -0.4097
210 S D -0.2677
211 L D -0.2382
212 S D -0.8213
213 D D -1.9422
214 T D -1.2118
215 P D -1.4452
216 A D -0.8581
217 S D -0.4993
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Calculations for various pH values

This page contains details and comparisons for all models calculated at different pH points.
Please find suggestions on interpreting the results below. More details can be found in the Tutorial.
The input structure is globular. Max score is recommended for pH analysis.

pH
Average A4D Score
Max A4D Score
4.0 -0.8532 2.8865 View CSV PDB
4.5 -0.8942 2.8795 View CSV PDB
5.0 -0.9386 2.8718 View CSV PDB
5.5 -0.9763 2.8641 View CSV PDB
6.0 -0.9965 2.8571 View CSV PDB
6.5 -0.9934 2.8515 View CSV PDB
7.0 -0.9714 2.8475 View CSV PDB
7.5 -0.9394 2.8446 View CSV PDB
8.0 -0.9018 2.8425 View CSV PDB
8.5 -0.858 2.8416 View CSV PDB
9.0 -0.8062 2.8423 View CSV PDB