Project name: 4c3393d13a64ba1

Status: done

Started: 2025-02-21 06:43:20
Chain sequence(s) A: MVADKSKKSKIEEKGEEENLEQIDAELVLSIEKLQEIQDDLEKINEKASDEVLEVEQKYNVIRKPVYDKRNEVIQSIPGFWMTAFLSHPALGDLLTEEDQKIFKYLNSLEVEDAKDVKSGYSITFHFTSNPFFEDAKLTKTFTFLEEGTTKITATPIKWKEGKGLPNGVNHDDKKGNKRALPEESFFTWFTDAQHKEDAGDEIHDEVADIIKEDLWSNPLTYFNNDADEEDFDGDDDGDEEGEEDDDDEEEEDGEE
input PDB
Selected Chain(s) A
Distance of aggregation 10 Å
FoldX usage No
pH calculations No
alphaCutter usage No
Dynamic mode No
Automated mutations No
Downloads Download all the data
Simulation log
[INFO]       Logger:   Verbosity set to: 2 - [INFO]                                                (00:00:00)
[WARNING]    runJob:   Working directory already exists (possibly overwriting previous results -ow 
                       to prevent this behavior)                                                   (00:00:00)
[INFO]       runJob:   Starting aggrescan3d job on: input.pdb with A chain(s) selected             (00:00:00)
[INFO]       runJob:   Creating pdb object from: input.pdb                                         (00:00:00)
[INFO]       runJob:   FoldX not utilized. Treating input pdb file as it was already optimized.    (00:00:00)
[INFO]       Analysis: Starting Aggrescan4D on folded.pdb                                          (00:00:01)
[INFO]       Main:     Simulation completed successfully.                                          (00:00:02)
Show buried residues

Minimal score value
-5.2661
Maximal score value
1.8712
Average score
-1.7609
Total score value
-450.7849

The table below lists A4D score for protein residues. Residues with A4D score > 0.0000 are marked by yellow rows.

residue index residue name chain Aggrescan4D score mutation
1 M A 1.7267
2 V A 1.5359
3 A A -0.4603
4 D A -2.8727
5 K A -3.5439
6 S A -2.8822
7 K A -3.9409
8 K A -4.1152
9 S A -3.7259
10 K A -4.0644
11 I A -2.3745
12 E A -4.2968
13 E A -5.2661
14 K A -4.6185
15 G A -4.1241
16 E A -5.1501
17 E A -4.8345
18 E A -4.5141
19 N A -3.5513
20 L A -2.0798
21 E A -3.3968
22 Q A -2.5567
23 I A -0.0391
24 D A -1.2501
25 A A -0.3869
26 E A -0.3740
27 L A 1.2992
28 V A 1.8712
29 L A 1.5014
30 S A 0.6994
31 I A 1.7675
32 E A -1.0707
33 K A -1.2800
34 L A 0.1967
35 Q A -1.8598
36 E A -2.7112
37 I A -0.5150
38 Q A -2.0276
39 D A -2.7983
40 D A -2.2593
41 L A -1.4125
42 E A -3.5017
43 K A -3.3251
44 I A -1.2955
45 N A -3.2350
46 E A -4.0903
47 K A -3.5204
48 A A -2.4574
49 S A -2.3984
50 D A -3.0413
51 E A -2.6031
52 V A -0.2424
53 L A -1.3472
54 E A -2.1178
55 V A -0.1251
56 E A -0.7312
57 Q A -1.4100
58 K A -0.6019
59 Y A 0.7193
60 N A -0.3003
61 V A 1.5778
62 I A 1.8022
63 R A 0.2466
64 K A -0.4418
65 P A -0.2333
66 V A 0.4455
67 Y A -0.6891
68 D A -2.0779
69 K A -2.1052
70 R A -1.2480
71 N A -1.7337
72 E A -2.1619
73 V A -0.1024
74 I A 0.0000
75 Q A -1.4323
76 S A -0.4524
77 I A 0.1463
78 P A -0.5803
79 G A -0.6947
80 F A 0.0000
81 W A 0.0000
82 M A -0.3876
83 T A -0.1922
84 A A 0.0000
85 F A 0.0000
86 L A 0.1092
87 S A -0.7063
88 H A 0.0000
89 P A -0.4992
90 A A -0.5942
91 L A 0.0000
92 G A -0.6318
93 D A -1.5178
94 L A -1.0007
95 L A 0.0000
96 T A -2.3974
97 E A -2.8778
98 E A -2.5569
99 D A 0.0000
100 Q A -2.1031
101 K A -2.5293
102 I A 0.0000
103 F A 0.0000
104 K A -2.0755
105 Y A -0.9314
106 L A 0.0000
107 N A -1.1623
108 S A 0.0000
109 L A 0.0000
110 E A -0.8048
111 V A -1.1223
112 E A -2.1180
113 D A -2.2165
114 A A -1.8210
115 K A -2.5846
116 D A -2.2662
117 V A -1.7713
118 K A -1.8184
119 S A -0.9772
120 G A 0.0000
121 Y A 0.0000
122 S A -0.7195
123 I A 0.0000
124 T A -0.7814
125 F A 0.0000
126 H A -1.1532
127 F A 0.0000
128 T A -0.8726
129 S A -0.7461
130 N A 0.0000
131 P A -1.0429
132 F A 0.0000
133 F A 0.0000
134 E A -2.7712
135 D A -2.1310
136 A A -1.3824
137 K A -2.0730
138 L A 0.0000
139 T A -0.5163
140 K A 0.0000
141 T A -0.3077
142 F A 0.0000
143 T A -0.1881
144 F A -0.1461
145 L A -0.7116
146 E A -2.3953
147 E A -2.5577
148 G A -2.2355
149 T A -2.4805
150 T A -1.8388
151 K A -1.6811
152 I A -1.4236
153 T A -0.8767
154 A A -0.4892
155 T A -0.6010
156 P A -0.5747
157 I A -1.3006
158 K A -2.6479
159 W A -2.0289
160 K A -2.7360
161 E A -2.8390
162 G A -1.9555
163 K A -2.2326
164 G A -1.3947
165 L A -0.9267
166 P A -1.4048
167 N A -2.1705
168 G A -0.5903
169 V A 0.2065
170 N A -2.1985
171 H A -2.9657
172 D A -3.9959
173 D A -4.7192
174 K A -4.2690
175 K A -3.8185
176 G A -3.2450
177 N A -3.4464
178 K A -3.0677
179 R A -2.7409
180 A A -1.0103
181 L A -0.0466
182 P A -1.4794
183 E A -2.6801
184 E A -2.6361
185 S A -1.9630
186 F A 0.0000
187 F A 0.0000
188 T A -1.0481
189 W A 0.0000
190 F A 0.0000
191 T A -1.3573
192 D A -2.5593
193 A A 0.0000
194 Q A -2.9880
195 H A -3.7486
196 K A -4.7439
197 E A -4.4400
198 D A -3.7413
199 A A -2.9748
200 G A -2.9851
201 D A -3.7232
202 E A -3.1498
203 I A -2.5716
204 H A -2.2991
205 D A -1.7350
206 E A -2.1877
207 V A -0.8699
208 A A 0.0000
209 D A -2.0263
210 I A -1.3687
211 I A 0.0000
212 K A -2.1530
213 E A -2.6913
214 D A -2.2141
215 L A 0.0000
216 W A 0.0000
217 S A -1.4138
218 N A -1.2521
219 P A 0.0000
220 L A 0.6618
221 T A -0.3381
222 Y A -0.3736
223 F A -0.3194
224 N A -1.8283
225 N A -2.7523
226 D A -3.0189
227 A A -3.1203
228 D A -4.0057
229 E A -4.3500
230 E A -4.1538
231 D A -3.4090
232 F A -1.5194
233 D A -3.1271
234 G A -2.9927
235 D A -3.7945
236 D A -4.3153
237 D A -4.2488
238 G A -3.7728
239 D A -4.2755
240 E A -4.3172
241 E A -4.2625
242 G A -3.7835
243 E A -4.3864
244 E A -4.6357
245 D A -4.7760
246 D A -4.6775
247 D A -4.7776
248 D A -4.7850
249 E A -4.6286
250 E A -4.7755
251 E A -4.6736
252 E A -4.3337
253 D A -3.8032
254 G A -3.0624
255 E A -3.3524
256 E A -2.7886
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