Project name: VgADm4mut

Status: done

Started: 2025-08-08 16:20:41
Chain sequence(s) A: MSDQEAKPSTEDLGDKKEGEYIKLKVIGQDSSEIHFKVKMTTHLKKLKESYCQRQGVPMNSLRFLFEGQRIADNHTPKELGMEEEDVIEVYQEQTGGHSTVDNSRLWQAGKEHIFHYTGRLLSGIPGLRPHFSGIGIETEVHLQVKSLEDIRLNLRQVNYTQVNGPLSPGLPHVTSSYEGSNWRYVLLPQFTQAPIDIKKLLKVPITFAIHDGEIKTITVSGTEQRWSLNFKKALVALFQTKMETSRLDLKMNTIVKDSDSTKNYWKVSEETIEGVCNVIYQVNELPEYIVKERAHYFPHLEACTSKKFYEITKTKNIDSCKKSAVYTFMKPAVKAESCNSFKCLSNTFGSASSMTRYYACGPRSNWILQTIVNEGEIVQRPVGVKSETITTGTRQVLKLRTIQPISSEVPKPPQPRTTEKIMYEYINAGQVSRQQIGIIPKIPQSELKSGEIYKYLPRHFNPAPSSTESKQHLSATKIKAELKSYIISIIDDLSSVEELAQKEIPLRLTTFIRGMTLLKVEDIKSLYTDLKSTVYSPAHSNQEKISMFHNIFFDAVMVSGTTPAVLFLKDMIKSKEIPTYQATYLLMLLPHHIITPTKEVFTSLLEIIQSEIVISNTILYNTAILSMSNLVEKTCLDKSRQVSYPTAVFGQFCDAQSEIVTEKWIPYLTKAVQTAPTADRRNAIIMALGALKHKDIIPALLPLVEGHGPIEQGSGVAFPNISRTLSIYAIGNVRVHHPELVLPIILSVYSNPAENTQLRIAAFNMLVNMNPPMNIIQKIAAMTWSEKNTEVLKKTYTGFYTLSRSVDISNLEDTSPESTLAKKTQLVVPLMRKTSGVLQGGSGVEMVSKGEEDNMAIIKEFMRFKVHMEGSVNGHEFEIEGEGEGRPYEGTQTAKLKVTKGGPLPFAWDILSPQFMYGSKAYVKHPADIPDYLKLSFPEGFKWERVMNFEDGGVVTVTQDSSLQDGEFIYKVKLRGTNFPSDGPVMQKKTMGWEASSERMYPEDGALKGEIKQRLKLKDGGHYDAEVKTTYKAKKPVQLPGAYNVNIKLDITSHNEDYTIVEQYERAEGRHSTGGMDELYKGGSGVEHHHHHH
input PDB
Selected Chain(s) A
Distance of aggregation 10 Å
FoldX usage Yes
pH calculations Yes
alphaCutter usage No
Dynamic mode No
Automated mutations No
Downloads Download all the data
Simulation log
[INFO]       Logger:   Verbosity set to: 2 - [INFO]                                                (00:00:01)
[WARNING]    runJob:   Working directory already exists (possibly overwriting previous results -ow 
                       to prevent this behavior)                                                   (00:00:01)
[INFO]       runJob:   Starting aggrescan3d job on: input.pdb with A chain(s) selected             (00:00:01)
[INFO]       runJob:   Creating pdb object from: input.pdb                                         (00:00:01)
[INFO]       PDB-Info: The input structure is globular. Max score is recommended for pH analysis.  (00:00:05)
[INFO]       FoldX:    Starting FoldX energy minimization                                          (00:00:06)
[INFO]       Analysis: Starting Aggrescan4D on folded.pdb                                          (00:24:06)
[INFO]       agg3D:    Running pKa-ANI on                                                          
                       /STORAGE/DATA/lcbio/aggreskan/4c7d0b5e11c702/tmp/folded.pdb                 (00:24:06)
[INFO]       Main:     Simulation completed successfully.                                          (00:37:57)
Show buried residues

Minimal score value
-4.366
Maximal score value
2.9324
Average score
-0.7752
Total score value
-848.0729

The table below lists A4D score for protein residues. Residues with A4D score > 0.0000 are marked by yellow rows.

residue index residue name chain Aggrescan4D score mutation
1 M A 0.2680
2 S A -1.1637
3 D A -2.6923
4 Q A -3.1161
5 E A -3.4159
6 A A -2.3366
7 K A -2.5179
8 P A -1.7017
9 S A -1.6014
10 T A -1.6033
11 E A -2.4661
12 D A -2.3810
13 L A -0.7782
14 G A -2.1545
15 D A -3.5349
16 K A -3.8483
17 K A -4.3660
18 E A -3.9479
19 G A -2.6492
20 E A -2.5593
21 Y A -1.7078
22 I A 0.0000
23 K A -3.3359
24 L A 0.0000
25 K A -2.0793
26 V A 0.0000
27 I A -1.2546
28 G A 0.0000
29 Q A -2.8232
30 D A -2.9492
31 S A -2.1306
32 S A -1.7172
33 E A -2.2335
34 I A -1.1104
35 H A -1.9846
36 F A -1.7511
37 K A -2.5765
38 V A 0.0000
39 K A -1.7858
40 M A -2.0457
41 T A -1.3427
42 T A -1.3937
43 H A -2.6442
44 L A 0.0000
45 K A -2.8549
46 K A -3.0891
47 L A 0.0000
48 K A 0.0000
49 E A -3.2447
50 S A -2.4028
51 Y A 0.0000
52 C A 0.0000
53 Q A -2.8309
54 R A -3.0194
55 Q A -2.2351
56 G A -1.6179
57 V A -1.1535
58 P A -0.9851
59 M A -1.3793
60 N A -1.8342
61 S A -1.3613
62 L A 0.0000
63 R A -1.6719
64 F A 0.0000
65 L A 0.0000
66 F A 0.0000
67 E A -2.6349
68 G A -2.3643
69 Q A -2.6849
70 R A -2.5772
71 I A 0.0000
72 A A -1.5734
73 D A -2.4384
74 N A -2.5238
75 H A -2.2335
76 T A -2.1998
77 P A 0.0000
78 K A -3.3051
79 E A -2.9380
80 L A -2.0096
81 G A -1.9847
82 M A 0.0000
83 E A -3.5977
84 E A -4.0764
85 E A -3.9287
86 D A -2.7501
87 V A -1.4685
88 I A 0.0000
89 E A -1.5722
90 V A 0.0000
91 Y A -1.3953
92 Q A -2.1177
93 E A -2.0361
94 Q A -2.3189
95 T A -1.7258
96 G A -1.4832
97 G A -1.5105
98 H A -1.5590
99 S A -0.9061
100 T A -0.6797
101 V A -0.1245
102 D A -1.3241
103 N A -1.3692
104 S A -1.2444
105 R A -1.8511
106 L A -0.7732
107 W A 0.0000
108 Q A -1.2413
109 A A -1.0204
110 G A -1.1103
111 K A -1.0716
112 E A 0.0000
113 H A 0.0000
114 I A 0.0000
115 F A 0.0000
116 H A -1.1044
117 Y A 0.0000
118 T A -0.2825
119 G A 0.0000
120 R A 0.2184
121 L A 0.7418
122 L A 0.0000
123 S A 0.2070
124 G A -0.0814
125 I A 0.0538
126 P A -0.3145
127 G A -0.4541
128 L A 0.1732
129 R A -1.3656
130 P A -0.8380
131 H A -1.0118
132 F A -0.5935
133 S A -0.6615
134 G A -0.1846
135 I A 0.2808
136 G A 0.0000
137 I A 0.0333
138 E A -0.7771
139 T A 0.0000
140 E A -1.3069
141 V A 0.0000
142 H A 0.0000
143 L A 0.0000
144 Q A 0.0000
145 V A 0.0000
146 K A -1.8901
147 S A -1.3833
148 L A -1.3778
149 E A -2.3522
150 D A -1.6557
151 I A 0.0000
152 R A 0.0000
153 L A 0.0000
154 N A -0.5827
155 L A 0.0000
156 R A -1.8344
157 Q A -2.1863
158 V A 0.0000
159 N A -1.4211
160 Y A -0.6812
161 T A 0.0000
162 Q A -1.2317
163 V A 0.0000
164 N A -1.6688
165 G A -1.2942
166 P A -1.1529
167 L A 0.0000
168 S A 0.1237
169 P A 0.2196
170 G A 0.5281
171 L A 0.2582
172 P A -0.5110
173 H A -0.8955
174 V A -0.1959
175 T A -0.3077
176 S A -0.2106
177 S A 0.0898
178 Y A 0.1356
179 E A -0.0613
180 G A 0.0000
181 S A -0.0743
182 N A 0.0000
183 W A 0.0000
184 R A 0.0000
185 Y A 0.6604
186 V A 0.0000
187 L A 1.3085
188 L A 0.4415
189 P A -0.4905
190 Q A -1.0444
191 F A -0.7752
192 T A -1.0398
193 Q A -1.2826
194 A A 0.0000
195 P A -0.2719
196 I A 0.4314
197 D A -1.3180
198 I A -0.8412
199 K A -1.7459
200 K A -2.0959
201 L A -1.1699
202 L A 0.0000
203 K A -1.9240
204 V A -1.0110
205 P A 0.0000
206 I A 0.0000
207 T A 0.0000
208 F A 0.0000
209 A A 0.0000
210 I A 0.0000
211 H A -2.3212
212 D A -2.5255
213 G A 0.0000
214 E A -1.7365
215 I A 0.0000
216 K A -2.9581
217 T A -2.1855
218 I A 0.0000
219 T A -1.2490
220 V A 0.0000
221 S A 0.0000
222 G A -1.6122
223 T A -1.2141
224 E A -1.3547
225 Q A -1.6784
226 R A -1.5475
227 W A -0.3538
228 S A 0.0000
229 L A 0.0000
230 N A -0.2881
231 F A 0.1189
232 K A 0.0000
233 K A 0.0000
234 A A 0.0000
235 L A 0.0000
236 V A 0.0000
237 A A -0.0159
238 L A 0.0000
239 F A 0.0000
240 Q A 0.0000
241 T A 0.0000
242 K A -0.9967
243 M A -1.0254
244 E A -1.0712
245 T A -1.2784
246 S A 0.0000
247 R A -1.9720
248 L A -0.4847
249 D A -1.3208
250 L A -0.9574
251 K A -0.6025
252 M A 0.2363
253 N A -0.5707
254 T A -0.9338
255 I A -0.9103
256 V A 0.0000
257 K A -3.2970
258 D A -3.0886
259 S A -2.4729
260 D A -2.9398
261 S A -1.8472
262 T A -1.7409
263 K A -2.2272
264 N A -1.3401
265 Y A 0.0000
266 W A 0.0000
267 K A -1.2250
268 V A -0.9333
269 S A -0.7533
270 E A 0.0000
271 E A -1.1753
272 T A 0.0000
273 I A 0.0377
274 E A -0.4798
275 G A 0.0000
276 V A -1.1116
277 C A 0.0000
278 N A -1.5108
279 V A 0.0000
280 I A 0.0000
281 Y A 0.0000
282 Q A 0.0000
283 V A 0.0000
284 N A 0.0000
285 E A -2.0576
286 L A 0.0000
287 P A -1.4968
288 E A -2.5005
289 Y A -0.5761
290 I A 0.0000
291 V A 0.0000
292 K A -2.6292
293 E A -2.8507
294 R A 0.0000
295 A A -1.5020
296 H A -1.3464
297 Y A -0.7018
298 F A 0.0000
299 P A -0.9517
300 H A -1.0414
301 L A -1.1207
302 E A -1.9180
303 A A -0.9869
304 C A 0.0000
305 T A -1.1707
306 S A -1.2550
307 K A -2.7240
308 K A -2.5490
309 F A 0.0000
310 Y A 0.0000
311 E A 0.0000
312 I A 0.0000
313 T A 0.0000
314 K A 0.0000
315 T A 0.0000
316 K A -0.6063
317 N A 0.0000
318 I A 0.0000
319 D A -1.5228
320 S A -1.4419
321 C A 0.0000
322 K A -3.0887
323 K A -2.7176
324 S A -1.4483
325 A A -0.1026
326 V A 1.0853
327 Y A 2.1902
328 T A 1.4406
329 F A 2.0752
330 M A 1.0114
331 K A -0.4125
332 P A -0.2100
333 A A -0.2159
334 V A -0.0591
335 K A -1.9319
336 A A -1.4894
337 E A -2.4467
338 S A -1.3835
339 C A -1.6302
340 N A -2.9551
341 S A -2.3617
342 F A 0.0000
343 K A -2.4517
344 C A -1.3227
345 L A 0.0000
346 S A 0.0000
347 N A -1.6861
348 T A -0.9303
349 F A 0.0000
350 G A -0.6060
351 S A 0.0000
352 A A 0.0000
353 S A 0.0000
354 S A 0.0000
355 M A 0.0000
356 T A 0.0000
357 R A 0.0000
358 Y A 0.0000
359 Y A 0.0000
360 A A 0.0000
361 C A 0.0000
362 G A 0.0000
363 P A -1.4205
364 R A -1.7704
365 S A -1.3385
366 N A -1.5592
367 W A -0.8043
368 I A -0.0649
369 L A 0.0000
370 Q A 0.0000
371 T A 0.0000
372 I A 0.0000
373 V A 0.0000
374 N A 0.0000
375 E A 0.0000
376 G A 0.0418
377 E A 0.0000
378 I A 0.4376
379 V A 0.0000
380 Q A -0.5711
381 R A -1.1707
382 P A -0.2569
383 V A 0.8868
384 G A 0.1629
385 V A 0.5675
386 K A -1.3018
387 S A -1.1185
388 E A -1.7901
389 T A -1.0246
390 I A -0.2230
391 T A -0.0518
392 T A 0.3893
393 G A 0.0000
394 T A 0.2090
395 R A -0.0775
396 Q A 0.0000
397 V A -0.0451
398 L A 0.0000
399 K A -1.0870
400 L A 0.0000
401 R A -1.7962
402 T A -0.7119
403 I A -0.0173
404 Q A -0.5586
405 P A -0.6034
406 I A -0.8239
407 S A -0.8258
408 S A -1.1634
409 E A -2.3021
410 V A 0.0000
411 P A -1.6040
412 K A -2.2989
413 P A 0.0000
414 P A -1.5738
415 Q A -2.1346
416 P A -2.0016
417 R A -1.9013
418 T A -1.5011
419 T A 0.0000
420 E A -2.9383
421 K A -2.4589
422 I A 0.0000
423 M A 0.0000
424 Y A 0.0184
425 E A -0.0315
426 Y A 1.3515
427 I A 1.5786
428 N A -0.0542
429 A A -0.0856
430 G A -0.5870
431 Q A -1.1188
432 V A -0.1451
433 S A -1.4353
434 R A -2.4476
435 Q A -2.2160
436 Q A -1.1606
437 I A 1.1174
438 G A 1.4777
439 I A 2.7717
440 I A 2.9324
441 P A 0.9151
442 K A -0.3215
443 I A 0.9624
444 P A -0.6616
445 Q A -1.3792
446 S A -1.2865
447 E A -2.0207
448 L A -0.4993
449 K A -2.0153
450 S A -1.0175
451 G A -1.1847
452 E A -1.2381
453 I A 1.7789
454 Y A 1.6359
455 K A -0.3316
456 Y A 1.2745
457 L A 1.4933
458 P A -0.3752
459 R A -1.9703
460 H A -1.3114
461 F A 0.3357
462 N A -1.2310
463 P A -0.7660
464 A A -0.4891
465 P A -0.6866
466 S A -1.0116
467 S A -1.2427
468 T A -1.4822
469 E A -2.6948
470 S A -2.5279
471 K A -3.0810
472 Q A -2.6013
473 H A -1.8937
474 L A -0.6230
475 S A -0.7611
476 A A -0.7554
477 T A -1.0871
478 K A -2.1408
479 I A -1.0469
480 K A -1.3922
481 A A -1.8304
482 E A -2.3674
483 L A 0.0000
484 K A -1.4045
485 S A -0.7616
486 Y A -0.1943
487 I A 0.0000
488 I A -0.1624
489 S A -0.4904
490 I A 0.0000
491 I A 0.0000
492 D A -1.7325
493 D A -1.2621
494 L A -0.2180
495 S A -0.7085
496 S A -0.3846
497 V A 0.6314
498 E A -1.7930
499 E A -2.4651
500 L A -0.8076
501 A A -1.2636
502 Q A -2.3270
503 K A -1.8570
504 E A -1.8605
505 I A 0.0000
506 P A -0.0358
507 L A 0.8438
508 R A 0.0260
509 L A 0.1760
510 T A 0.1557
511 T A -0.1936
512 F A 0.0000
513 I A -0.2143
514 R A -1.3683
515 G A -0.6145
516 M A 0.0000
517 T A 0.0890
518 L A 0.8891
519 L A 0.0000
520 K A -1.9823
521 V A -1.7593
522 E A -2.5741
523 D A -1.7341
524 I A 0.0000
525 K A -1.8470
526 S A -1.6195
527 L A 0.0000
528 Y A 0.0000
529 T A -1.2301
530 D A -1.9523
531 L A 0.0000
532 K A -0.8206
533 S A -0.6958
534 T A -0.5390
535 V A 0.0000
536 Y A 0.2344
537 S A -0.1036
538 P A -0.3445
539 A A -0.3143
540 H A -0.9630
541 S A -1.0918
542 N A -1.9644
543 Q A -2.3774
544 E A -2.7219
545 K A -1.9087
546 I A -1.2246
547 S A -1.2458
548 M A -0.9917
549 F A 0.0000
550 H A -0.8005
551 N A -0.8595
552 I A -0.3461
553 F A 0.0000
554 F A 0.0000
555 D A -0.6081
556 A A 0.0000
557 V A 0.0000
558 M A 0.0000
559 V A 0.1760
560 S A 0.0000
561 G A 0.0000
562 T A 0.0000
563 T A -0.5888
564 P A -0.8202
565 A A 0.0000
566 V A 0.0000
567 L A -0.5667
568 F A 0.0000
569 L A 0.0000
570 K A -0.8249
571 D A -1.4928
572 M A -1.2253
573 I A 0.0000
574 K A -2.0734
575 S A -1.6134
576 K A -2.2597
577 E A -1.5613
578 I A 0.0000
579 P A -0.2388
580 T A 0.3067
581 Y A 1.0752
582 Q A 0.0000
583 A A 0.0000
584 T A 0.0000
585 Y A 0.4076
586 L A 0.0000
587 L A 0.0000
588 M A 0.0000
589 L A -0.1079
590 L A 0.0000
591 P A -0.3753
592 H A -0.7940
593 H A 0.0063
594 I A 0.0000
595 I A 0.9921
596 T A 0.4175
597 P A 0.0000
598 T A -1.1684
599 K A -2.7491
600 E A -2.6149
601 V A 0.0000
602 F A 0.0000
603 T A -1.5473
604 S A 0.0000
605 L A 0.0000
606 L A 0.0000
607 E A -1.9634
608 I A 0.0000
609 I A 0.0000
610 Q A -1.8479
611 S A 0.0000
612 E A -2.0331
613 I A -1.2075
614 V A 0.0000
615 I A -0.2691
616 S A -0.4103
617 N A -0.3497
618 T A 0.0302
619 I A 0.3816
620 L A 0.0000
621 Y A 0.0000
622 N A -0.0222
623 T A 0.0000
624 A A 0.0000
625 I A 0.0000
626 L A 0.0000
627 S A 0.0000
628 M A 0.0000
629 S A 0.0000
630 N A -0.6020
631 L A 0.0000
632 V A 0.0000
633 E A -0.9759
634 K A -1.4228
635 T A 0.0000
636 C A 0.0000
637 L A 0.0000
638 D A -1.9313
639 K A -2.1751
640 S A -1.2157
641 R A -1.5119
642 Q A -1.2906
643 V A 1.1844
644 S A -0.1137
645 Y A 0.0000
646 P A 1.0129
647 T A 0.0000
648 A A 1.1994
649 V A 2.5078
650 F A 2.4571
651 G A 0.5521
652 Q A -0.7852
653 F A -0.5769
654 C A 0.0000
655 D A -1.2628
656 A A -1.2816
657 Q A -1.9747
658 S A -2.1529
659 E A -3.2446
660 I A -2.2050
661 V A 0.0000
662 T A -2.3329
663 E A -3.1918
664 K A -2.4959
665 W A 0.0000
666 I A 0.0000
667 P A -1.3897
668 Y A -1.1438
669 L A 0.0000
670 T A -1.1831
671 K A -2.0446
672 A A -1.2093
673 V A 0.0000
674 Q A -1.6905
675 T A -1.2123
676 A A -0.9474
677 P A -0.7993
678 T A -0.5311
679 A A -0.4110
680 D A -0.7529
681 R A 0.0000
682 R A 0.0000
683 N A -0.2521
684 A A 0.0000
685 I A 0.0000
686 I A 0.0000
687 M A 0.0721
688 A A 0.0000
689 L A 0.0000
690 G A 0.0000
691 A A -0.3670
692 L A 0.0000
693 K A -1.0220
694 H A 0.0000
695 K A -1.6487
696 D A -1.4127
697 I A 0.0000
698 I A 0.0000
699 P A -0.9774
700 A A 0.0000
701 L A 0.0000
702 L A 0.0000
703 P A -1.1712
704 L A 0.0000
705 V A 0.0000
706 E A -2.1369
707 G A -1.5383
708 H A -1.4752
709 G A -1.0954
710 P A -0.8755
711 I A -0.3597
712 E A -1.8891
713 Q A -1.9266
714 G A -1.2918
715 S A -0.6697
716 G A -0.1489
717 V A 1.2159
718 A A 0.4873
719 F A 0.0000
720 P A 0.1575
721 N A -0.7643
722 I A 0.3279
723 S A 0.0000
724 R A -0.7989
725 T A 0.0000
726 L A 0.2914
727 S A 0.0000
728 I A 0.0000
729 Y A 0.2329
730 A A 0.0000
731 I A 0.0000
732 G A 0.0000
733 N A -0.7694
734 V A 0.0000
735 R A -1.6038
736 V A -0.5144
737 H A -1.1095
738 H A -1.2941
739 P A -1.3626
740 E A -1.3357
741 L A 0.0000
742 V A 0.0000
743 L A -0.4538
744 P A -0.2550
745 I A 0.0000
746 I A 0.0000
747 L A 0.0000
748 S A -0.1926
749 V A 0.0000
750 Y A 0.0000
751 S A 0.0000
752 N A -0.7564
753 P A -0.9323
754 A A -0.6891
755 E A -0.9878
756 N A -1.1415
757 T A -0.7907
758 Q A -0.6204
759 L A 0.0000
760 R A 0.0000
761 I A -0.0568
762 A A 0.0000
763 A A 0.0000
764 F A 0.0000
765 N A -0.3316
766 M A -0.3803
767 L A 0.0000
768 V A -0.6399
769 N A -1.7735
770 M A -0.8086
771 N A -1.0112
772 P A 0.0000
773 P A -0.2179
774 M A -0.1391
775 N A -0.4132
776 I A 0.0000
777 I A 0.0000
778 Q A 0.0000
779 K A 0.0000
780 I A 0.0000
781 A A 0.0000
782 A A 0.0000
783 M A 0.0000
784 T A 0.0000
785 W A 0.0000
786 S A -0.6388
787 E A -1.2847
788 K A -2.2104
789 N A -1.4288
790 T A -1.1794
791 E A -1.2365
792 V A 0.0000
793 L A 0.0000
794 K A -1.2841
795 K A -0.6869
796 T A 0.0000
797 Y A 0.0000
798 T A -0.2881
799 G A -0.0494
800 F A 0.0000
801 Y A -0.1438
802 T A -0.3961
803 L A -0.6031
804 S A 0.0000
805 R A -1.8622
806 S A -1.2957
807 V A -1.2383
808 D A -1.3315
809 I A 0.4537
810 S A -0.1252
811 N A -0.7584
812 L A 0.2172
813 E A -1.4656
814 D A -1.4594
815 T A -1.0543
816 S A -1.2106
817 P A -1.4896
818 E A -2.2310
819 S A 0.0000
820 T A -0.6613
821 L A 0.0000
822 A A 0.0000
823 K A -0.4363
824 K A -0.5420
825 T A 0.0000
826 Q A -0.1714
827 L A -0.0505
828 V A 0.0000
829 V A 0.0000
830 P A -0.1579
831 L A 0.0000
832 M A 0.0000
833 R A -0.7762
834 K A -0.9687
835 T A -0.6035
836 S A 0.2522
837 G A 0.4474
838 V A 1.8218
839 L A 1.4308
840 Q A -0.6374
841 G A -0.6986
842 G A -1.2301
843 S A -0.6064
844 G A -0.5365
845 V A 1.1107
846 E A -0.3489
847 M A 0.9596
848 V A 0.7763
849 S A -0.8462
850 K A -2.4626
851 G A -2.1095
852 E A -2.0575
853 E A -3.0317
854 D A -3.0309
855 N A 0.0000
856 M A -0.9563
857 A A -0.9012
858 I A -0.4688
859 I A 0.0000
860 K A -1.2194
861 E A -1.6303
862 F A -0.4315
863 M A 0.0000
864 R A -2.5565
865 F A 0.0000
866 K A -2.9745
867 V A 0.0000
868 H A -2.4015
869 M A 0.0000
870 E A -3.3068
871 G A -2.5251
872 S A -1.8733
873 V A 0.0000
874 N A 0.0000
875 G A -0.3523
876 H A -0.8674
877 E A -2.5229
878 F A 0.0000
879 E A -3.0262
880 I A 0.0000
881 E A -3.0562
882 G A 0.0000
883 E A -3.4457
884 G A 0.0000
885 E A -1.9507
886 G A 0.0000
887 R A -1.6058
888 P A 0.0000
889 Y A -1.1178
890 E A -1.7283
891 G A 0.0000
892 T A 0.0000
893 Q A 0.0000
894 T A -1.0335
895 A A 0.0000
896 K A -2.2851
897 L A 0.0000
898 K A -2.0824
899 V A 0.0000
900 T A -1.7762
901 K A -2.9934
902 G A -1.8505
903 G A -1.6181
904 P A -1.0812
905 L A 0.0000
906 P A -0.5397
907 F A 0.0000
908 A A 0.0000
909 W A 0.0000
910 D A 0.0000
911 I A 0.0000
912 L A 0.0000
913 S A 0.0000
914 P A 0.0000
915 Q A 0.0000
916 F A 0.0000
917 M A 0.0000
918 Y A 0.0000
919 G A 0.0000
920 S A 0.0000
921 K A 0.0000
922 A A 0.0000
923 Y A 0.0000
924 V A 0.0000
925 K A -1.4932
926 H A -1.1831
927 P A -1.0154
928 A A -1.0078
929 D A -2.1641
930 I A 0.0000
931 P A -0.7196
932 D A -0.7195
933 Y A 0.0000
934 L A 0.0000
935 K A 0.0000
936 L A -0.4693
937 S A 0.0000
938 F A 0.0000
939 P A -0.9217
940 E A -1.7510
941 G A 0.0000
942 F A 0.0000
943 K A -1.8220
944 W A 0.0000
945 E A -1.9629
946 R A 0.0000
947 V A -0.4335
948 M A 0.0000
949 N A -1.3810
950 F A 0.0000
951 E A -2.5816
952 D A -1.6943
953 G A -1.0947
954 G A 0.0000
955 V A -0.5063
956 V A 0.0000
957 T A -0.8508
958 V A 0.0000
959 T A -1.6735
960 Q A 0.0000
961 D A -1.6518
962 S A 0.0000
963 S A -1.0927
964 L A -1.2316
965 Q A -2.4736
966 D A -2.6356
967 G A -2.1080
968 E A -2.3497
969 F A 0.0000
970 I A -1.6040
971 Y A 0.0000
972 K A -2.4588
973 V A 0.0000
974 K A -3.0396
975 L A 0.0000
976 R A -1.8965
977 G A 0.0000
978 T A -0.3025
979 N A -0.2947
980 F A 0.0000
981 P A -0.8061
982 S A -1.0179
983 D A -1.6367
984 G A -1.2132
985 P A -1.4488
986 V A 0.0000
987 M A 0.0000
988 Q A -1.7820
989 K A -1.8940
990 K A -2.2989
991 T A -1.4337
992 M A -0.4456
993 G A -0.4395
994 W A 0.0000
995 E A -1.4935
996 A A -0.6446
997 S A 0.0000
998 S A -0.8806
999 E A 0.0000
1000 R A -1.5000
1001 M A 0.0000
1002 Y A -0.2129
1003 P A -0.9742
1004 E A -1.7587
1005 D A -2.4724
1006 G A -1.8167
1007 A A 0.0000
1008 L A 0.0000
1009 K A -1.6255
1010 G A 0.0000
1011 E A -1.7835
1012 I A 0.0000
1013 K A -2.7044
1014 Q A 0.0000
1015 R A -2.4081
1016 L A 0.0000
1017 K A -1.8434
1018 L A -2.1256
1019 K A -3.0047
1020 D A -3.0217
1021 G A -2.0274
1022 G A -1.8018
1023 H A -1.7676
1024 Y A 0.0000
1025 D A -2.2686
1026 A A 0.0000
1027 E A -2.2613
1028 V A 0.0000
1029 K A -1.8623
1030 T A 0.0000
1031 T A -1.4482
1032 Y A 0.0000
1033 K A -1.7628
1034 A A -1.3833
1035 K A -1.7644
1036 K A -1.3554
1037 P A -0.8457
1038 V A -0.7266
1039 Q A -1.1134
1040 L A -0.5412
1041 P A 0.0000
1042 G A -0.1285
1043 A A 0.0051
1044 Y A 0.0000
1045 N A -0.9828
1046 V A 0.0000
1047 N A 0.0000
1048 I A 0.0000
1049 K A -0.5879
1050 L A 0.0000
1051 D A -0.5758
1052 I A -0.0086
1053 T A -0.2464
1054 S A -0.8743
1055 H A -1.5073
1056 N A -1.5894
1057 E A -2.4077
1058 D A -1.8363
1059 Y A -0.9878
1060 T A -0.9760
1061 I A -0.8964
1062 V A 0.0000
1063 E A -1.3558
1064 Q A 0.0000
1065 Y A -0.1838
1066 E A 0.0000
1067 R A -1.0670
1068 A A 0.0000
1069 E A -1.1833
1070 G A 0.0000
1071 R A -1.2115
1072 H A -1.3222
1073 S A -0.7181
1074 T A -0.6122
1075 G A -1.1957
1076 G A -1.3873
1077 M A -1.1823
1078 D A -2.5203
1079 E A -2.6132
1080 L A 0.0000
1081 Y A -0.7410
1082 K A -2.3349
1083 G A -1.4352
1084 G A -0.8763
1085 S A -0.8026
1086 G A -0.8369
1087 V A 0.0237
1088 E A -2.0673
1089 H A -2.3898
1090 H A -2.7136
1091 H A -2.9622
1092 H A -2.7012
1093 H A -2.4055
1094 H A -1.9066
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Calculations for various pH values

This page contains details and comparisons for all models calculated at different pH points.
Please find suggestions on interpreting the results below. More details can be found in the Tutorial.
The input structure is globular. Max score is recommended for pH analysis.

pH
Average A4D Score
Max A4D Score
4.0 -0.7096 5.2002 View CSV PDB
4.5 -0.7761 5.2002 View CSV PDB
5.0 -0.8568 5.2002 View CSV PDB
5.5 -0.9337 5.2083 View CSV PDB
6.0 -0.9866 5.2714 View CSV PDB
6.5 -1.0026 5.3645 View CSV PDB
7.0 -0.9841 5.4746 View CSV PDB
7.5 -0.9449 5.5917 View CSV PDB
8.0 -0.8952 5.7109 View CSV PDB
8.5 -0.839 5.8303 View CSV PDB
9.0 -0.7768 5.9476 View CSV PDB