Chain sequence(s) |
A: MSIVRRSNVFDPFADLWADPFDTFRSIVPAISGGSSETAAFANARVDWKETPEAHVFKVDLPGVKKEEVKVEVEDGNVLVVSGERSREKEDKNDKWHRVERSSGKFVRRFRLPEDAKVEEVKAGLENGVLTVTVPKAEVKKPEVKAIEISG
input PDB |
Selected Chain(s) | A |
Distance of aggregation | 10 Å |
FoldX usage | No |
pH calculations | No |
alphaCutter usage | No |
Dynamic mode | No |
Automated mutations | No |
Downloads | Download all the data |
Simulation log |
[INFO] Logger: Verbosity set to: 2 - [INFO] (00:00:00) [WARNING] runJob: Working directory already exists (possibly overwriting previous results -ow to prevent this behavior) (00:00:00) [INFO] runJob: Starting aggrescan3d job on: input.pdb with A chain(s) selected (00:00:00) [INFO] runJob: Creating pdb object from: input.pdb (00:00:00) [INFO] runJob: FoldX not utilized. Treating input pdb file as it was already optimized. (00:00:00) [INFO] Analysis: Starting Aggrescan4D on folded.pdb (00:00:01) [INFO] Main: Simulation completed successfully. (00:00:01) |
The table below lists A4D score for protein residues. Residues with A4D score > 0.0000 are marked by yellow rows.
residue index | residue name | chain | Aggrescan4D score | mutation |
---|---|---|---|---|
1 | M | A | 1.5128 | |
2 | S | A | 1.2919 | |
3 | I | A | 2.1992 | |
4 | V | A | 1.1452 | |
5 | R | A | -1.4872 | |
6 | R | A | -2.3258 | |
7 | S | A | -1.5658 | |
8 | N | A | -1.6120 | |
9 | V | A | -0.3575 | |
10 | F | A | 0.7945 | |
11 | D | A | 0.5888 | |
12 | P | A | 1.0062 | |
13 | F | A | 1.8570 | |
14 | A | A | 0.7741 | |
15 | D | A | -0.7786 | |
16 | L | A | 0.7420 | |
17 | W | A | 0.8960 | |
18 | A | A | -0.1743 | |
19 | D | A | -0.9554 | |
20 | P | A | 0.0860 | |
21 | F | A | 1.1065 | |
22 | D | A | -0.9193 | |
23 | T | A | 0.5099 | |
24 | F | A | 1.8425 | |
25 | R | A | -0.3165 | |
26 | S | A | 0.6606 | |
27 | I | A | 2.8071 | |
28 | V | A | 2.3377 | |
29 | P | A | 1.1395 | |
30 | A | A | 1.2750 | |
31 | I | A | 2.3456 | |
32 | S | A | 0.6584 | |
33 | G | A | -0.1661 | |
34 | G | A | -0.0079 | |
35 | S | A | -0.4036 | |
36 | S | A | -0.7963 | |
37 | E | A | -1.3990 | |
38 | T | A | -0.5219 | |
39 | A | A | -0.4257 | |
40 | A | A | -0.8554 | |
41 | F | A | -0.4388 | |
42 | A | A | -0.5670 | |
43 | N | A | 0.0000 | |
44 | A | A | 0.0000 | |
45 | R | A | -2.5635 | |
46 | V | A | -2.3053 | |
47 | D | A | -2.9885 | |
48 | W | A | -2.1075 | |
49 | K | A | -3.0234 | |
50 | E | A | -2.9248 | |
51 | T | A | -2.0106 | |
52 | P | A | -1.8044 | |
53 | E | A | -2.6080 | |
54 | A | A | -1.8123 | |
55 | H | A | 0.0000 | |
56 | V | A | -1.7749 | |
57 | F | A | 0.0000 | |
58 | K | A | -2.6327 | |
59 | V | A | 0.0000 | |
60 | D | A | -2.3100 | |
61 | L | A | 0.0000 | |
62 | P | A | -1.3960 | |
63 | G | A | -1.9175 | |
64 | V | A | 0.0000 | |
65 | K | A | -3.7235 | |
66 | K | A | -4.0258 | |
67 | E | A | -3.7336 | |
68 | E | A | -3.2154 | |
69 | V | A | -2.4280 | |
70 | K | A | -2.3471 | |
71 | V | A | -0.6867 | |
72 | E | A | -0.8419 | |
73 | V | A | -0.9442 | |
74 | E | A | -2.0042 | |
75 | D | A | -2.5082 | |
76 | G | A | -2.0321 | |
77 | N | A | -1.8891 | |
78 | V | A | 0.0000 | |
79 | L | A | 0.0000 | |
80 | V | A | 0.0000 | |
81 | V | A | 0.0000 | |
82 | S | A | -1.0209 | |
83 | G | A | -2.1817 | |
84 | E | A | -2.6494 | |
85 | R | A | -2.6529 | |
86 | S | A | -2.8613 | |
87 | R | A | -4.0831 | |
88 | E | A | -4.3837 | |
89 | K | A | -4.7472 | |
90 | E | A | -5.3768 | |
91 | D | A | -5.2882 | |
92 | K | A | -4.5270 | |
93 | N | A | -4.0302 | |
94 | D | A | -4.5897 | |
95 | K | A | -3.5819 | |
96 | W | A | -1.5938 | |
97 | H | A | -1.8408 | |
98 | R | A | -2.2247 | |
99 | V | A | -0.8245 | |
100 | E | A | -2.4469 | |
101 | R | A | -2.8564 | |
102 | S | A | -1.6741 | |
103 | S | A | -2.3124 | |
104 | G | A | -1.8135 | |
105 | K | A | -2.1370 | |
106 | F | A | 0.0000 | |
107 | V | A | -0.4247 | |
108 | R | A | -0.2711 | |
109 | R | A | -0.4118 | |
110 | F | A | 0.0000 | |
111 | R | A | -0.8480 | |
112 | L | A | 0.0000 | |
113 | P | A | -1.1721 | |
114 | E | A | -2.2930 | |
115 | D | A | -1.4178 | |
116 | A | A | -1.9204 | |
117 | K | A | -1.9967 | |
118 | V | A | -1.6408 | |
119 | E | A | -2.4656 | |
120 | E | A | -2.3620 | |
121 | V | A | -1.4998 | |
122 | K | A | -1.9431 | |
123 | A | A | -0.9803 | |
124 | G | A | -1.2662 | |
125 | L | A | -1.7107 | |
126 | E | A | -2.5788 | |
127 | N | A | -2.1909 | |
128 | G | A | -1.9037 | |
129 | V | A | -1.5172 | |
130 | L | A | 0.0000 | |
131 | T | A | -1.2944 | |
132 | V | A | 0.0000 | |
133 | T | A | -1.3768 | |
134 | V | A | 0.0000 | |
135 | P | A | -1.9248 | |
136 | K | A | -1.9096 | |
137 | A | A | -1.5275 | |
138 | E | A | -2.1563 | |
139 | V | A | -0.5733 | |
140 | K | A | -2.4542 | |
141 | K | A | -2.6354 | |
142 | P | A | -1.9314 | |
143 | E | A | -2.2254 | |
144 | V | A | 0.0171 | |
145 | K | A | -1.0039 | |
146 | A | A | 0.2174 | |
147 | I | A | 1.4072 | |
148 | E | A | -0.1457 | |
149 | I | A | 1.4374 | |
150 | S | A | 0.3097 | |
151 | G | A | -0.2804 |