Chain sequence(s) |
A: MAEEKHHHLFHHKEGEDFQPAADGGVDTYGYSTETVVTATGNDGEYERITKEEKHHKHKEHLGEMGAAAAGAFALYEKHEAKKDPEHAHKHKIEEEVAAAAAVGAGGFVFHEHHEKKQDHKEAKEASGEKKHHLFG
input PDB |
Selected Chain(s) | A |
Distance of aggregation | 10 Å |
FoldX usage | No |
pH calculations | No |
alphaCutter usage | No |
Dynamic mode | No |
Automated mutations | No |
Downloads | Download all the data |
Simulation log |
[INFO] Logger: Verbosity set to: 2 - [INFO] (00:00:00) [WARNING] runJob: Working directory already exists (possibly overwriting previous results -ow to prevent this behavior) (00:00:00) [INFO] runJob: Starting aggrescan3d job on: input.pdb with A chain(s) selected (00:00:00) [INFO] runJob: Creating pdb object from: input.pdb (00:00:00) [INFO] runJob: FoldX not utilized. Treating input pdb file as it was already optimized. (00:00:00) [INFO] Analysis: Starting Aggrescan4D on folded.pdb (00:00:00) [INFO] Main: Simulation completed successfully. (00:00:01) |
The table below lists A4D score for protein residues. Residues with A4D score > 0.0000 are marked by yellow rows.
residue index | residue name | chain | Aggrescan4D score | mutation |
---|---|---|---|---|
1 | M | A | 0.4840 | |
2 | A | A | -0.6929 | |
3 | E | A | -2.7763 | |
4 | E | A | -3.6174 | |
5 | K | A | -3.6754 | |
6 | H | A | -2.9663 | |
7 | H | A | -1.7749 | |
8 | H | A | -0.4590 | |
9 | L | A | 1.4099 | |
10 | F | A | 1.3415 | |
11 | H | A | -0.8873 | |
12 | H | A | -2.1451 | |
13 | K | A | -3.4308 | |
14 | E | A | -3.6339 | |
15 | G | A | -2.9816 | |
16 | E | A | -3.2950 | |
17 | D | A | -2.3106 | |
18 | F | A | -0.0375 | |
19 | Q | A | -1.0350 | |
20 | P | A | -0.7094 | |
21 | A | A | -0.6278 | |
22 | A | A | -1.2113 | |
23 | D | A | -1.9395 | |
24 | G | A | -1.3279 | |
25 | G | A | -0.7537 | |
26 | V | A | 0.5081 | |
27 | D | A | -0.8609 | |
28 | T | A | 0.1243 | |
29 | Y | A | 1.0439 | |
30 | G | A | 0.5420 | |
31 | Y | A | 0.9838 | |
32 | S | A | -0.1512 | |
33 | T | A | -0.5256 | |
34 | E | A | -0.9817 | |
35 | T | A | 0.4032 | |
36 | V | A | 2.0271 | |
37 | V | A | 2.3393 | |
38 | T | A | 1.2818 | |
39 | A | A | 0.5348 | |
40 | T | A | -0.5464 | |
41 | G | A | -1.8085 | |
42 | N | A | -2.5730 | |
43 | D | A | -3.0065 | |
44 | G | A | -2.5956 | |
45 | E | A | -2.7985 | |
46 | Y | A | -0.9762 | |
47 | E | A | -2.4815 | |
48 | R | A | -2.5993 | |
49 | I | A | -0.5193 | |
50 | T | A | -1.5194 | |
51 | K | A | -3.5397 | |
52 | E | A | -4.2350 | |
53 | E | A | -4.1697 | |
54 | K | A | -4.3641 | |
55 | H | A | -4.0630 | |
56 | H | A | -4.3351 | |
57 | K | A | -4.2513 | |
58 | H | A | -3.6386 | |
59 | K | A | -4.0508 | |
60 | E | A | -4.0887 | |
61 | H | A | -2.7573 | |
62 | L | A | -0.7617 | |
63 | G | A | -1.8177 | |
64 | E | A | -2.1716 | |
65 | M | A | -0.1080 | |
66 | G | A | -0.4703 | |
67 | A | A | -0.2295 | |
68 | A | A | 0.1956 | |
69 | A | A | 0.6087 | |
70 | A | A | 0.9210 | |
71 | G | A | 1.1031 | |
72 | A | A | 1.3691 | |
73 | F | A | 2.0968 | |
74 | A | A | 0.9193 | |
75 | L | A | 1.2145 | |
76 | Y | A | 0.6620 | |
77 | E | A | -2.0182 | |
78 | K | A | -2.8122 | |
79 | H | A | -2.9100 | |
80 | E | A | -4.0387 | |
81 | A | A | -3.9577 | |
82 | K | A | -4.7450 | |
83 | K | A | -4.5074 | |
84 | D | A | -4.2674 | |
85 | P | A | -3.2633 | |
86 | E | A | -3.6778 | |
87 | H | A | -3.2022 | |
88 | A | A | -2.8012 | |
89 | H | A | -2.7852 | |
90 | K | A | -3.6634 | |
91 | H | A | -3.8220 | |
92 | K | A | -3.3130 | |
93 | I | A | -1.3274 | |
94 | E | A | -2.8416 | |
95 | E | A | -3.3887 | |
96 | E | A | -2.2707 | |
97 | V | A | 0.2386 | |
98 | A | A | -0.2334 | |
99 | A | A | -0.1228 | |
100 | A | A | 0.2448 | |
101 | A | A | 0.4570 | |
102 | A | A | 0.7300 | |
103 | V | A | 1.7927 | |
104 | G | A | 0.8361 | |
105 | A | A | 0.9562 | |
106 | G | A | 1.2973 | |
107 | G | A | 1.6191 | |
108 | F | A | 2.5772 | |
109 | V | A | 2.3238 | |
110 | F | A | 1.7795 | |
111 | H | A | -0.6585 | |
112 | E | A | -1.9306 | |
113 | H | A | -2.7884 | |
114 | H | A | -3.7301 | |
115 | E | A | -4.7123 | |
116 | K | A | -4.6715 | |
117 | K | A | -4.8498 | |
118 | Q | A | -5.0198 | |
119 | D | A | -5.2367 | |
120 | H | A | -4.8231 | |
121 | K | A | -5.1689 | |
122 | E | A | -4.9800 | |
123 | A | A | -3.6966 | |
124 | K | A | -4.2750 | |
125 | E | A | -3.9140 | |
126 | A | A | -2.4246 | |
127 | S | A | -2.3523 | |
128 | G | A | -2.6774 | |
129 | E | A | -3.3072 | |
130 | K | A | -3.8114 | |
131 | K | A | -3.6877 | |
132 | H | A | -2.1213 | |
133 | H | A | -0.5032 | |
134 | L | A | 1.6777 | |
135 | F | A | 2.1224 | |
136 | G | A | 0.6703 |