Project name: 50f799d3c17073d

Status: done

Started: 2025-05-15 13:53:55
Chain sequence(s) A: VLSPADKTNVKAAWGKVGAHAGEYGAEALERMFLSFPTTKTYFPHFDLSHGSAQVKGHGKKVADALTNAVAHVDDMPNALSALSDLHAHKLRVDPVNFKLLSHCLLVTLAAHLPAEFTPAVHASLDKFLASVSTVLTSKYR
C: VLSPADKTNVKAAWGKVGAHAGEYGAEALERMFLSFPTTKTYFPHFDLSHGSAQVKGHGKKVADALTNAVAHVDDMPNALSALSDLHAHKLRVDPVNFKLLSHCLLVTLAAHLPAEFTPAVHASLDKFLASVSTVLTSKYR
B: VHFTEEDKATITSLWGKVNVEDAGGETLGRLLVVYPWTQRFFDSFGNLSSASAIMGNPKVKAHGKKVLTSLGDAIKHLDDLKGTFAQLSELHCDKLHVDPENFKLLGNVLVTVLAIHFGKEFTPEVQASWQKMVTGVASALSSRYH
E: VLSPADKTNVKAAWGKVGAHAGEYGAEALERMFLSFPTTKTYFPHFDLSHGSAQVKGHGKKVADALTNAVAHVDDMPNALSALSDLHAHKLRVDPVNFKLLSHCLLVTLAAHLPAEFTPAVHASLDKFLASVSTVLTSKYR
D: HFTEEDKATITSLWGKVNVEDAGGETLGRLLVVYPWTQRFFDSFGNLSSASAIMGNPKVKAHGKKVLTSLGDAIKHLDDLKGTFAQLSELHCDKLHVDPENFKLLGNVLVTVLAIHFGKEFTPEVQASWQKMVTGVASALSSRYH
G: VLSPADKTNVKAAWGKVGAHAGEYGAEALERMFLSFPTTKTYFPHFDLSHGSAQVKGHGKKVADALTNAVAHVDDMPNALSALSDLHAHKLRVDPVNFKLLSHCLLVTLAAHLPAEFTPAVHASLDKFLASVSTVLTSKYR
F: VHFTEEDKATITSLWGKVNVEDAGGETLGRLLVVYPWTQRFFDSFGNLSSASAIMGNPKVKAHGKKVLTSLGDAIKHLDDLKGTFAQLSELHCDKLHVDPENFKLLGNVLVTVLAIHFGKEFTPEVQASWQKMVTGVASALSSRYH
H: VHFTEEDKATITSLWGKVNVEDAGGETLGRLLVVYPWTQRFFDSFGNLSSASAIMGNPKVKAHGKKVLTSLGDAIKHLDDLKGTFAQLSELHCDKLHVDPENFKLLGNVLVTVLAIHFGKEFTPEVQASWQKMVTGVASALSSRYH
input PDB
Selected Chain(s) A,C,B,E,D,G,F,H
Distance of aggregation 10 Å
FoldX usage Yes
pH calculations Yes
alphaCutter usage No
Dynamic mode No
Automated mutations No
Downloads Download all the data
Simulation log
[INFO]       Logger:   Verbosity set to: 2 - [INFO]                                                (00:00:01)
[WARNING]    runJob:   Working directory already exists (possibly overwriting previous results -ow 
                       to prevent this behavior)                                                   (00:00:01)
[INFO]       runJob:   Starting aggrescan3d job on: input.pdb with all chain(s) selected           (00:00:01)
[INFO]       runJob:   Creating pdb object from: input.pdb                                         (00:00:01)
[INFO]       PDB-Info: The input structure is globular. Max score is recommended for pH analysis.  (00:00:03)
[INFO]       FoldX:    Starting FoldX energy minimization                                          (00:00:03)
[INFO]       Analysis: Starting Aggrescan4D on folded.pdb                                          (00:21:56)
[INFO]       agg3D:    Running pKa-ANI on                                                          
                       /STORAGE/DATA/lcbio/aggreskan/50f799d3c17073d/tmp/folded.pdb                (00:21:56)
[INFO]       Main:     Simulation completed successfully.                                          (00:27:56)
Show buried residues

Minimal score value
-3.8919
Maximal score value
1.1793
Average score
-0.8151
Total score value
-934.8793

The table below lists A4D score for protein residues. Residues with A4D score > 0.0000 are marked by yellow rows.

residue index residue name chain Aggrescan4D score mutation
1 V A 0.3205
2 L A 0.1068
3 S A -0.0461
4 P A -0.3150
5 A A -0.4722
6 D A -0.6094
7 K A -0.9358
8 T A -0.8241
9 N A -0.9294
10 V A 0.0000
11 K A -1.7184
12 A A -1.2268
13 A A 0.0000
14 W A 0.0000
15 G A -1.4449
16 K A -1.6726
17 V A 0.0000
18 G A -1.3102
19 A A -0.9902
20 H A -1.8221
21 A A 0.0000
22 G A -2.6871
23 E A -2.8988
24 Y A 0.0000
25 G A 0.0000
26 A A 0.0000
27 E A -1.2849
28 A A 0.0000
29 L A 0.0000
30 E A -0.7234
31 R A 0.0000
32 M A 0.0000
33 F A 0.0000
34 L A 0.3429
35 S A 0.1770
36 F A 0.2989
37 P A 0.0057
38 T A 0.0000
39 T A 0.0000
40 K A -0.5688
41 T A -0.3320
42 Y A -0.0082
43 F A -0.2091
44 P A -0.7215
45 H A -1.1302
46 F A -0.8377
47 D A -1.5742
48 L A -1.0298
49 S A -1.0195
50 H A -1.4524
51 G A -1.3365
52 S A 0.0000
53 A A -1.3249
54 Q A -1.5567
55 V A 0.0000
56 K A -3.1784
57 G A -2.3341
58 H A -2.1963
59 G A 0.0000
60 K A -3.1939
61 K A -2.7483
62 V A -1.2337
63 A A 0.0000
64 D A -1.9543
65 A A -1.2654
66 L A 0.0000
67 T A -1.4136
68 N A -1.6314
69 A A 0.0000
70 V A 0.0000
71 A A -1.3660
72 H A -2.1476
73 V A 0.0000
74 D A -2.5523
75 D A -2.7492
76 M A 0.0000
77 P A -1.7075
78 N A -2.0642
79 A A -1.5459
80 L A 0.0000
81 S A -0.6896
82 A A -0.2102
83 L A 0.1518
84 S A 0.0000
85 D A -1.5134
86 L A -0.7851
87 H A -0.8268
88 A A 0.0000
89 H A -2.1274
90 K A -2.2008
91 L A -0.8615
92 R A -1.1775
93 V A -0.2374
94 D A 0.0000
95 P A -0.1526
96 V A -0.1230
97 N A 0.0000
98 F A -0.1627
99 K A -0.9658
100 L A -0.1704
101 L A 0.0521
102 S A -0.3243
103 H A 0.0000
104 C A 0.0000
105 L A 0.0000
106 L A 0.0000
107 V A 0.0000
108 T A 0.0000
109 L A 0.0000
110 A A 0.0000
111 A A 0.0000
112 H A -0.9519
113 L A -0.4137
114 P A -0.3340
115 A A -0.3682
116 E A -0.9252
117 F A 0.0000
118 T A -0.2028
119 P A -0.0658
120 A A -0.0763
121 V A -0.1827
122 H A 0.0000
123 A A -0.1087
124 S A 0.0000
125 L A 0.0000
126 D A -0.5190
127 K A -0.3063
128 F A 0.0000
129 L A 0.0000
130 A A -0.2742
131 S A 0.0000
132 V A 0.0000
133 S A -0.1641
134 T A -0.4545
135 V A 0.0000
136 L A -0.0580
137 T A -0.3767
138 S A -0.7271
139 K A -1.0139
140 Y A 0.0000
141 R A -0.3218
1 V B 0.5235
2 H B -0.2998
3 F B 0.0000
4 T B -1.6926
5 E B -2.9662
6 E B -2.9040
7 D B -2.1792
8 K B -2.2854
9 A B -1.4515
10 T B -1.1622
11 I B 0.0000
12 T B -1.0653
13 S B -0.7743
14 L B 0.0000
15 W B -0.7224
16 G B -1.3173
17 K B -1.9679
18 V B -1.5908
19 N B -2.2919
20 V B -1.9549
21 E B -3.4351
22 D B -3.2245
23 A B 0.0000
24 G B 0.0000
25 G B 0.0000
26 E B -1.3304
27 T B 0.0000
28 L B 0.0000
29 G B 0.0000
30 R B 0.0000
31 L B 0.0000
32 L B 0.0000
33 V B 0.2370
34 V B 0.0000
35 Y B 0.1391
36 P B -0.0577
37 W B 0.1550
38 T B 0.0000
39 Q B 0.0000
40 R B -0.4181
41 F B 0.0885
42 F B -0.8169
43 D B -1.9165
44 S B -1.3516
45 F B -1.2942
46 G B -1.6911
47 N B -1.9701
48 L B -0.9559
49 S B -0.6376
50 S B -0.4192
51 A B -0.1170
52 S B -0.4239
53 A B -0.6434
54 I B 0.0000
55 M B -0.5391
56 G B -1.0672
57 N B 0.0000
58 P B -1.6675
59 K B -2.3331
60 V B 0.0000
61 K B -2.9597
62 A B -2.3598
63 H B -1.9629
64 G B 0.0000
65 K B -2.9563
66 K B -2.2123
67 V B -0.8401
68 L B 0.0000
69 T B -1.4026
70 S B -1.0678
71 L B 0.0000
72 G B 0.0000
73 D B -2.5230
74 A B 0.0000
75 I B 0.0000
76 K B -3.1769
77 H B -3.1819
78 L B 0.0000
79 D B -2.3536
80 D B -3.0541
81 L B 0.0000
82 K B -2.0424
83 G B -1.8851
84 T B -1.9401
85 F B 0.0000
86 A B -1.1911
87 Q B -1.4897
88 L B -0.9113
89 S B 0.0000
90 E B -2.0148
91 L B -1.1943
92 H B -1.0880
93 C B 0.0000
94 D B -2.6879
95 K B -2.2530
96 L B -0.6127
97 H B -0.8786
98 V B -0.2730
99 D B 0.0000
100 P B -0.6372
101 E B -0.7871
102 N B 0.0000
103 F B 0.0000
104 K B -0.7971
105 L B -0.2609
106 L B -0.0413
107 G B -0.2297
108 N B -0.2751
109 V B 0.0000
110 L B 0.0000
111 V B 0.0000
112 T B 0.0000
113 V B 0.0000
114 L B 0.0000
115 A B 0.0000
116 I B -0.2723
117 H B -0.9643
118 F B -1.2740
119 G B -1.5252
120 K B -2.6761
121 E B -2.6022
122 F B 0.0000
123 T B -1.5951
124 P B -1.2442
125 E B -1.5454
126 V B -1.0623
127 Q B 0.0000
128 A B -0.3592
129 S B 0.0000
130 W B 0.0000
131 Q B 0.0000
132 K B -0.4945
133 M B 0.0000
134 V B 0.0000
135 T B -0.3743
136 G B 0.0000
137 V B 0.0000
138 A B 0.0000
139 S B -0.5860
140 A B 0.0000
141 L B 0.0000
142 S B -0.6733
143 S B -0.8229
144 R B -1.5771
145 Y B -0.8365
146 H B -0.3979
1 V G 0.8567
2 L G 0.0000
3 S G -0.0368
4 P G -0.3683
5 A G -0.5341
6 D G -0.6040
7 K G -1.2719
8 T G -0.8350
9 N G -0.8528
10 V G 0.0000
11 K G -1.5811
12 A G -1.2401
13 A G 0.0000
14 W G -1.1162
15 G G -1.6191
16 K G -2.2203
17 V G 0.0000
18 G G -1.2670
19 A G -0.9785
20 H G -1.7241
21 A G -1.9090
22 G G -2.7963
23 E G -2.8179
24 Y G 0.0000
25 G G 0.0000
26 A G 0.0000
27 E G -1.3558
28 A G 0.0000
29 L G 0.0000
30 E G -1.1258
31 R G 0.0000
32 M G 0.0000
33 F G 0.0000
34 L G -0.1211
35 S G -0.0295
36 F G 0.3067
37 P G -0.1313
38 T G 0.0000
39 T G 0.0000
40 K G -0.5277
41 T G -0.1750
42 Y G 0.0898
43 F G -0.2432
44 P G -0.8209
45 H G -1.2416
46 F G -1.1445
47 D G -2.0052
48 L G -1.3420
49 S G -1.2245
50 H G -1.6529
51 G G -1.5539
52 S G 0.0000
53 A G -1.4043
54 Q G -1.9018
55 V G 0.0000
56 K G -3.2628
57 G G -2.3774
58 H G -2.3500
59 G G 0.0000
60 K G -3.5955
61 K G -3.0689
62 V G -1.5889
63 A G 0.0000
64 D G -2.4211
65 A G -1.3737
66 L G 0.0000
67 T G -1.2354
68 N G -1.1694
69 A G 0.0000
70 V G 0.0000
71 A G -1.2086
72 H G -2.0601
73 V G 0.0000
74 D G -2.7634
75 D G -3.2362
76 M G 0.0000
77 P G -2.1440
78 N G -2.2081
79 A G -1.4541
80 L G 0.0000
81 S G -1.0148
82 A G -0.4670
83 L G -0.5803
84 S G 0.0000
85 D G -2.1909
86 L G -1.0707
87 H G -0.9378
88 A G -1.3659
89 H G -2.2176
90 K G -2.1646
91 L G -0.6506
92 R G -1.1860
93 V G -0.0976
94 D G 0.0000
95 P G -0.1470
96 V G -0.0541
97 N G 0.0000
98 F G -0.3081
99 K G -1.3353
100 L G -0.2760
101 L G -0.0285
102 S G -0.4077
103 H G 0.0000
104 C G 0.0000
105 L G 0.0000
106 L G 0.0000
107 V G 0.0000
108 T G 0.0000
109 L G 0.0000
110 A G 0.0000
111 A G 0.0000
112 H G -0.7361
113 L G -0.3855
114 P G -0.2919
115 A G -0.2692
116 E G -0.6844
117 F G 0.0000
118 T G -0.1449
119 P G -0.0690
120 A G -0.0373
121 V G -0.1182
122 H G 0.0000
123 A G -0.0718
124 S G 0.0000
125 L G 0.0000
126 D G -0.5094
127 K G -0.1818
128 F G 0.0000
129 L G 0.0000
130 A G -0.7151
131 S G 0.0000
132 V G 0.0000
133 S G -0.6433
134 T G -0.8065
135 V G 0.0000
136 L G -0.6647
137 T G -0.5058
138 S G -0.9464
139 K G -1.9013
140 Y G 0.0000
141 R G -2.1666
1 V H -0.7552
2 H H -1.1328
3 F H -1.4382
4 T H -1.8006
5 E H -2.9975
6 E H -2.9142
7 D H -2.1820
8 K H -2.3239
9 A H -1.4101
10 T H -1.1869
11 I H 0.0000
12 T H -1.1804
13 S H -0.7166
14 L H 0.0000
15 W H -0.7385
16 G H -1.3374
17 K H -2.0686
18 V H -1.7058
19 N H -2.3320
20 V H -2.1096
21 E H -3.3069
22 D H -3.2443
23 A H 0.0000
24 G H 0.0000
25 G H 0.0000
26 E H -1.2937
27 T H 0.0000
28 L H 0.0000
29 G H 0.0000
30 R H 0.0000
31 L H 0.0000
32 L H 0.0000
33 V H 0.1837
34 V H 0.0000
35 Y H 0.1252
36 P H -0.2669
37 W H 0.0000
38 T H 0.0000
39 Q H -0.5456
40 R H -0.8661
41 F H -0.0974
42 F H -0.9286
43 D H -1.9850
44 S H -1.4064
45 F H -1.3970
46 G H -1.7463
47 N H -1.8399
48 L H 0.0000
49 S H -0.7241
50 S H -0.4050
51 A H -0.1255
52 S H -0.4488
53 A H -0.6848
54 I H 0.0000
55 M H -0.5996
56 G H -1.0347
57 N H 0.0000
58 P H -1.5883
59 K H -2.3541
60 V H 0.0000
61 K H -2.7659
62 A H -2.1011
63 H H -1.8992
64 G H 0.0000
65 K H -2.5732
66 K H -2.2455
67 V H -0.6990
68 L H 0.0000
69 T H -1.3790
70 S H -1.0387
71 L H -0.8944
72 G H -1.5076
73 D H -2.5498
74 A H 0.0000
75 I H 0.0000
76 K H -3.2773
77 H H -3.3905
78 L H 0.0000
79 D H -3.4672
80 D H -3.7030
81 L H 0.0000
82 K H -2.6446
83 G H -2.2283
84 T H -2.1215
85 F H 0.0000
86 A H -1.4873
87 Q H -1.7417
88 L H -0.9892
89 S H 0.0000
90 E H -2.5172
91 L H -1.2704
92 H H -1.2075
93 C H 0.0000
94 D H -2.6381
95 K H -2.3075
96 L H -0.7738
97 H H -1.0454
98 V H 0.0000
99 D H -0.4484
100 P H -0.6181
101 E H -0.8744
102 N H 0.0000
103 F H 0.0000
104 K H -0.8418
105 L H -0.2599
106 L H 0.0124
107 G H -0.2313
108 N H -0.2933
109 V H 0.0000
110 L H 0.0000
111 V H 0.0000
112 T H 0.0000
113 V H 0.0000
114 L H 0.0000
115 A H 0.0000
116 I H -0.4094
117 H H -1.5578
118 F H -1.4095
119 G H -1.5891
120 K H -2.6749
121 E H -2.8555
122 F H 0.0000
123 T H -1.6560
124 P H -1.3216
125 E H -1.8848
126 V H -1.1414
127 Q H 0.0000
128 A H -0.4991
129 S H 0.0000
130 W H 0.0000
131 Q H 0.0000
132 K H -0.2667
133 M H 0.0000
134 V H 0.0000
135 T H -0.1954
136 G H 0.0000
137 V H -0.1909
138 A H 0.0000
139 S H -0.5074
140 A H 0.0000
141 L H -0.7631
142 S H -0.8318
143 S H -1.2708
144 R H -1.8802
145 Y H -1.1370
146 H H -0.4240
1 V C 0.3670
2 L C -0.2015
3 S C -0.6804
4 P C -0.4339
5 A C -0.5822
6 D C 0.0000
7 K C -1.1085
8 T C -0.8031
9 N C -0.8076
10 V C 0.0000
11 K C -1.7144
12 A C -1.3584
13 A C 0.0000
14 W C 0.0000
15 G C -1.8469
16 K C -2.3789
17 V C 0.0000
18 G C -1.3573
19 A C -1.0871
20 H C -1.9866
21 A C -1.8981
22 G C -2.5681
23 E C -2.6216
24 Y C 0.0000
25 G C 0.0000
26 A C 0.0000
27 E C -1.1783
28 A C 0.0000
29 L C 0.0000
30 E C -0.8016
31 R C 0.0000
32 M C 0.0000
33 F C 0.0000
34 L C -0.0169
35 S C 0.0000
36 F C 0.2003
37 P C -0.3232
38 T C 0.0000
39 T C 0.0000
40 K C -0.4600
41 T C -0.2680
42 Y C 0.0029
43 F C -0.2238
44 P C -0.7012
45 H C -1.2035
46 F C -0.8819
47 D C -1.7553
48 L C -1.1592
49 S C -1.1192
50 H C -1.6765
51 G C -1.7252
52 S C 0.0000
53 A C -1.2318
54 Q C -1.6975
55 V C 0.0000
56 K C -2.7471
57 G C -2.1210
58 H C -2.0944
59 G C 0.0000
60 K C -3.2938
61 K C -2.8139
62 V C -1.5998
63 A C 0.0000
64 D C -2.0913
65 A C -1.3385
66 L C 0.0000
67 T C -1.3912
68 N C -1.5982
69 A C 0.0000
70 V C 0.0000
71 A C -1.3599
72 H C -2.1518
73 V C -1.6608
74 D C -2.5522
75 D C -2.7875
76 M C 0.0000
77 P C -1.5638
78 N C -2.0872
79 A C -1.5728
80 L C 0.0000
81 S C -0.8123
82 A C -0.3926
83 L C -0.3531
84 S C 0.0000
85 D C -1.9649
86 L C -1.1064
87 H C -1.0919
88 A C 0.0000
89 H C -2.3699
90 K C -2.3027
91 L C -1.0642
92 R C -1.5902
93 V C -0.4401
94 D C 0.0000
95 P C -0.2463
96 V C -0.1564
97 N C 0.0000
98 F C -0.1561
99 K C -0.8755
100 L C -0.0932
101 L C 0.0830
102 S C -0.2722
103 H C 0.0000
104 C C 0.0000
105 L C 0.0000
106 L C 0.0000
107 V C 0.0000
108 T C 0.0000
109 L C 0.0000
110 A C 0.0000
111 A C 0.0000
112 H C -0.9944
113 L C -0.4571
114 P C -0.3256
115 A C -0.1511
116 E C -0.6011
117 F C 0.0000
118 T C -0.0591
119 P C -0.0361
120 A C 0.0468
121 V C -0.1634
122 H C 0.0000
123 A C 0.0000
124 S C 0.0000
125 L C 0.0000
126 D C -0.4381
127 K C -0.2352
128 F C 0.0000
129 L C 0.0000
130 A C -0.1573
131 S C 0.2686
132 V C 0.0000
133 S C -0.1546
134 T C -0.2071
135 V C -0.3292
136 L C 0.0000
137 T C 0.0000
138 S C -0.3466
139 K C -0.8049
140 Y C 0.0000
141 R C -0.0714
2 H D -2.2488
3 F D 0.0000
4 T D -1.9697
5 E D -3.0482
6 E D -3.0639
7 D D 0.0000
8 K D -2.5336
9 A D -1.4401
10 T D -1.1976
11 I D 0.0000
12 T D -1.0888
13 S D -0.7346
14 L D 0.0000
15 W D -0.8105
16 G D -1.3950
17 K D -2.1261
18 V D -1.8063
19 N D -2.5223
20 V D -2.0768
21 E D -3.1652
22 D D -3.1068
23 A D -2.0252
24 G D 0.0000
25 G D 0.0000
26 E D -1.3784
27 T D 0.0000
28 L D 0.0000
29 G D 0.0000
30 R D 0.0000
31 L D 0.0000
32 L D 0.0000
33 V D 0.2188
34 V D 0.0000
35 Y D 0.1389
36 P D -0.2133
37 W D 0.0880
38 T D 0.0000
39 Q D -0.4719
40 R D -0.5150
41 F D -0.0153
42 F D -0.7838
43 D D -1.9393
44 S D -1.4041
45 F D -1.3654
46 G D -1.7012
47 N D -1.9922
48 L D -0.9412
49 S D -0.6688
50 S D -0.4289
51 A D -0.1079
52 S D -0.4358
53 A D -0.6500
54 I D 0.0000
55 M D -0.5933
56 G D -1.1062
57 N D 0.0000
58 P D -1.6623
59 K D -2.4461
60 V D 0.0000
61 K D -2.6177
62 A D -2.1490
63 H D -1.8307
64 G D 0.0000
65 K D -2.8726
66 K D -1.9719
67 V D -0.8119
68 L D 0.0000
69 T D -1.2270
70 S D -0.8716
71 L D -0.6807
72 G D -1.3737
73 D D -2.3669
74 A D 0.0000
75 I D 0.0000
76 K D -3.2146
77 H D -3.5084
78 L D 0.0000
79 D D -3.7505
80 D D -3.8919
81 L D 0.0000
82 K D -2.9243
83 G D -2.2687
84 T D -2.1448
85 F D 0.0000
86 A D -1.5229
87 Q D -1.8515
88 L D -1.3652
89 S D 0.0000
90 E D -2.7515
91 L D -1.5607
92 H D -1.2939
93 C D 0.0000
94 D D -2.6156
95 K D -2.3614
96 L D -0.7941
97 H D -0.9724
98 V D -0.2166
99 D D 0.0000
100 P D -0.4620
101 E D -0.5157
102 N D 0.0000
103 F D 0.0000
104 K D -0.6895
105 L D -0.2174
106 L D -0.0078
107 G D -0.1886
108 N D -0.2738
109 V D 0.0000
110 L D 0.0000
111 V D 0.0000
112 T D 0.0000
113 V D 0.0000
114 L D 0.0000
115 A D 0.0000
116 I D -0.4513
117 H D -1.3857
118 F D -1.2647
119 G D -1.5050
120 K D -2.4768
121 E D -2.3428
122 F D 0.0000
123 T D -1.4938
124 P D -1.3191
125 E D -1.9502
126 V D -1.0086
127 Q D 0.0000
128 A D -0.4875
129 S D 0.0000
130 W D 0.0000
131 Q D 0.0000
132 K D -0.5528
133 M D 0.0000
134 V D 0.0000
135 T D -0.3363
136 G D -0.9972
137 V D -0.2459
138 A D 0.0000
139 S D -0.5709
140 A D 0.0000
141 L D -0.7616
142 S D -0.6629
143 S D -0.8543
144 R D -1.3722
145 Y D -0.5899
146 H D -0.2256
1 V E 1.1793
2 L E 0.0000
3 S E -0.0444
4 P E -0.3646
5 A E -0.5578
6 D E -0.6240
7 K E -1.2740
8 T E -0.9119
9 N E -0.9228
10 V E 0.0000
11 K E -1.7311
12 A E -1.2945
13 A E 0.0000
14 W E -1.1313
15 G E -1.6324
16 K E -2.0943
17 V E 0.0000
18 G E -1.2201
19 A E -0.9473
20 H E -1.6471
21 A E -1.6501
22 G E -2.4311
23 E E -2.5305
24 Y E 0.0000
25 G E 0.0000
26 A E 0.0000
27 E E -1.2190
28 A E 0.0000
29 L E 0.0000
30 E E -1.0318
31 R E 0.0000
32 M E 0.0000
33 F E 0.0000
34 L E -0.0803
35 S E -0.0274
36 F E 0.2217
37 P E -0.0906
38 T E 0.0000
39 T E 0.0000
40 K E -0.3762
41 T E -0.1905
42 Y E 0.0860
43 F E -0.3180
44 P E -0.7618
45 H E -1.1945
46 F E -1.0198
47 D E -1.7774
48 L E -1.2438
49 S E -1.1445
50 H E -1.5936
51 G E -1.5173
52 S E 0.0000
53 A E -1.3569
54 Q E -1.8213
55 V E 0.0000
56 K E -3.1436
57 G E -2.3337
58 H E -2.2052
59 G E 0.0000
60 K E -3.2262
61 K E -2.7852
62 V E -1.4179
63 A E 0.0000
64 D E -1.9294
65 A E -1.2510
66 L E 0.0000
67 T E -1.2608
68 N E -1.4815
69 A E 0.0000
70 V E 0.0000
71 A E -1.2605
72 H E -1.8835
73 V E -1.7524
74 D E -2.3832
75 D E -2.4158
76 M E 0.0000
77 P E -1.3711
78 N E -1.9093
79 A E -1.3961
80 L E 0.0000
81 S E -1.0527
82 A E -0.6426
83 L E -0.3656
84 S E 0.0000
85 D E -2.4091
86 L E -0.9737
87 H E -0.8289
88 A E 0.0000
89 H E -2.1725
90 K E -1.9200
91 L E -0.3148
92 R E -1.0250
93 V E 0.0857
94 D E 0.0000
95 P E 0.0767
96 V E 0.4083
97 N E 0.0000
98 F E -0.0652
99 K E -0.8978
100 L E -0.0977
101 L E 0.0621
102 S E -0.3306
103 H E 0.0000
104 C E 0.0000
105 L E 0.0000
106 L E 0.0000
107 V E 0.0000
108 T E 0.0000
109 L E 0.0000
110 A E 0.0000
111 A E 0.0000
112 H E -0.7904
113 L E -0.4057
114 P E -0.3577
115 A E -0.3581
116 E E -0.8450
117 F E 0.0000
118 T E -0.1918
119 P E -0.0819
120 A E -0.0520
121 V E -0.1537
122 H E 0.0000
123 A E -0.0559
124 S E 0.0000
125 L E 0.0000
126 D E -0.5160
127 K E -0.1935
128 F E 0.0000
129 L E 0.0000
130 A E -0.4325
131 S E 0.0942
132 V E 0.0000
133 S E -0.1160
134 T E -0.0390
135 V E -0.4799
136 L E 0.0000
137 T E -0.3181
138 S E -0.8108
139 K E -1.7367
140 Y E -1.7420
141 R E -2.3734
1 V F -0.4856
2 H F -1.0907
3 F F -1.3841
4 T F -1.7877
5 E F -3.0140
6 E F -3.0729
7 D F 0.0000
8 K F -2.3625
9 A F -1.4612
10 T F -1.1633
11 I F 0.0000
12 T F -0.9658
13 S F -0.5193
14 L F -0.4659
15 W F -0.3919
16 G F -0.9728
17 K F -1.5616
18 V F -1.2770
19 N F -2.0801
20 V F -1.9053
21 E F -3.4371
22 D F -3.1616
23 A F 0.0000
24 G F 0.0000
25 G F 0.0000
26 E F -1.3652
27 T F 0.0000
28 L F 0.0000
29 G F 0.0000
30 R F 0.0000
31 L F 0.0000
32 L F 0.0000
33 V F 0.1918
34 V F 0.0000
35 Y F 0.0456
36 P F -0.3666
37 W F 0.0000
38 T F 0.0000
39 Q F -0.6697
40 R F -0.8301
41 F F -0.1392
42 F F -0.9294
43 D F -2.0093
44 S F -1.3747
45 F F -1.2712
46 G F -1.6891
47 N F -1.8410
48 L F 0.0000
49 S F -0.7218
50 S F -0.3966
51 A F -0.1121
52 S F -0.4387
53 A F -0.6486
54 I F 0.0000
55 M F -0.5489
56 G F -0.9984
57 N F 0.0000
58 P F -1.4649
59 K F -2.0672
60 V F 0.0000
61 K F -2.7757
62 A F -2.2537
63 H F -1.9271
64 G F 0.0000
65 K F -2.8181
66 K F -2.2313
67 V F -0.7884
68 L F 0.0000
69 T F -1.2952
70 S F -0.9764
71 L F -0.8028
72 G F 0.0000
73 D F -2.4434
74 A F 0.0000
75 I F 0.0000
76 K F -3.0614
77 H F -3.1788
78 L F 0.0000
79 D F -3.1615
80 D F -3.0846
81 L F 0.0000
82 K F -2.7534
83 G F -2.0253
84 T F -1.9694
85 F F 0.0000
86 A F -1.4577
87 Q F -1.5919
88 L F -0.8315
89 S F 0.0000
90 E F -2.1070
91 L F -1.3526
92 H F -1.3020
93 C F -1.8672
94 D F -2.8835
95 K F -2.3852
96 L F -0.9199
97 H F -1.1638
98 V F 0.0000
99 D F -0.4805
100 P F -0.7317
101 E F -1.0257
102 N F 0.0000
103 F F 0.0000
104 K F -0.7855
105 L F 0.0000
106 L F -0.0526
107 G F -0.1954
108 N F -0.2218
109 V F 0.0000
110 L F 0.0000
111 V F 0.0000
112 T F 0.0000
113 V F 0.0000
114 L F 0.0000
115 A F 0.0000
116 I F -0.5003
117 H F -1.4479
118 F F 0.0000
119 G F -1.7307
120 K F -2.7473
121 E F -2.9328
122 F F 0.0000
123 T F -1.6428
124 P F -1.2943
125 E F -2.0483
126 V F -1.1338
127 Q F 0.0000
128 A F -0.4920
129 S F 0.0000
130 W F 0.0000
131 Q F 0.0000
132 K F -0.3169
133 M F 0.0000
134 V F 0.0000
135 T F -0.1039
136 G F 0.0000
137 V F -0.1481
138 A F -0.4466
139 S F -0.5889
140 A F 0.0000
141 L F -0.7466
142 S F -1.0009
143 S F -1.6642
144 R F -2.7535
145 Y F -1.5751
146 H F -0.8699
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Calculations for various pH values

This page contains details and comparisons for all models calculated at different pH points.
Please find suggestions on interpreting the results below. More details can be found in the Tutorial.
The input structure is globular. Max score is recommended for pH analysis.

pH
Average A4D Score
Max A4D Score
4.0 -0.8059 1.8941 View CSV PDB
4.5 -0.8661 1.8771 View CSV PDB
5.0 -0.9329 1.8578 View CSV PDB
5.5 -0.9897 1.8392 View CSV PDB
6.0 -1.0197 1.8244 View CSV PDB
6.5 -1.015 1.8163 View CSV PDB
7.0 -0.9843 1.8143 View CSV PDB
7.5 -0.9416 1.8159 View CSV PDB
8.0 -0.8938 1.8224 View CSV PDB
8.5 -0.8398 1.8716 View CSV PDB
9.0 -0.7765 1.921 View CSV PDB