Chain sequence(s) |
A: MAEEYKNNVPEHETPTVATEESPATTTEVTDRGLFDFLGKKEEEVKPQETTTLESEFDHKAQISEPELAAEHEEVKENKITLLEELQEKTEEDEENKPSVIEKLHRSNSSSSSSSDEEGEEKKEKKKKIVEGEEDKKGLVEKIKEKLPGHHDKTAEDDVPVSTTIPVPVSESVVEHDHPEEEKKGLVEKIKEKLPGHHDEKAEDSPAVTSTPLVVTEHPVEPTTELPVEHPEEKKGILEKIKEKLPGYHAKTTEEEVKKEKESDD
input PDB |
Selected Chain(s) | A |
Distance of aggregation | 10 Å |
FoldX usage | No |
pH calculations | No |
alphaCutter usage | No |
Dynamic mode | No |
Automated mutations | No |
Downloads | Download all the data |
Simulation log |
[INFO] Logger: Verbosity set to: 2 - [INFO] (00:00:00) [WARNING] runJob: Working directory already exists (possibly overwriting previous results -ow to prevent this behavior) (00:00:00) [INFO] runJob: Starting aggrescan3d job on: input.pdb with A chain(s) selected (00:00:00) [INFO] runJob: Creating pdb object from: input.pdb (00:00:00) [INFO] runJob: FoldX not utilized. Treating input pdb file as it was already optimized. (00:00:00) [INFO] Analysis: Starting Aggrescan4D on folded.pdb (00:00:01) [INFO] Main: Simulation completed successfully. (00:00:02) |
The table below lists A4D score for protein residues. Residues with A4D score > 0.0000 are marked by yellow rows.
residue index | residue name | chain | Aggrescan4D score | mutation |
---|---|---|---|---|
1 | M | A | 0.4512 | |
2 | A | A | -0.6066 | |
3 | E | A | -2.2730 | |
4 | E | A | -2.5720 | |
5 | Y | A | -1.3965 | |
6 | K | A | -2.5506 | |
7 | N | A | -2.1203 | |
8 | N | A | -1.6537 | |
9 | V | A | -0.1314 | |
10 | P | A | -1.2521 | |
11 | E | A | -2.5868 | |
12 | H | A | -2.6537 | |
13 | E | A | -2.9053 | |
14 | T | A | -1.3740 | |
15 | P | A | -0.4021 | |
16 | T | A | 0.3945 | |
17 | V | A | 1.4554 | |
18 | A | A | 0.1673 | |
19 | T | A | -0.9969 | |
20 | E | A | -2.5640 | |
21 | E | A | -2.8713 | |
22 | S | A | -1.6582 | |
23 | P | A | -0.7765 | |
24 | A | A | -0.3813 | |
25 | T | A | -0.4061 | |
26 | T | A | -0.4554 | |
27 | T | A | -0.5158 | |
28 | E | A | -1.2798 | |
29 | V | A | 0.0601 | |
30 | T | A | -1.2662 | |
31 | D | A | -2.5631 | |
32 | R | A | -2.1386 | |
33 | G | A | -0.6039 | |
34 | L | A | 1.7373 | |
35 | F | A | 2.3049 | |
36 | D | A | -0.1728 | |
37 | F | A | 2.0986 | |
38 | L | A | 1.6964 | |
39 | G | A | -0.8298 | |
40 | K | A | -3.0359 | |
41 | K | A | -3.8815 | |
42 | E | A | -4.4220 | |
43 | E | A | -4.1026 | |
44 | E | A | -2.9769 | |
45 | V | A | -0.3963 | |
46 | K | A | -1.7529 | |
47 | P | A | -1.7111 | |
48 | Q | A | -2.5788 | |
49 | E | A | -2.5272 | |
50 | T | A | -1.1057 | |
51 | T | A | -0.4337 | |
52 | T | A | -0.3263 | |
53 | L | A | 0.1905 | |
54 | E | A | -1.3545 | |
55 | S | A | -1.4805 | |
56 | E | A | -1.8307 | |
57 | F | A | -0.6600 | |
58 | D | A | -2.4065 | |
59 | H | A | -2.6211 | |
60 | K | A | -2.4841 | |
61 | A | A | -1.3164 | |
62 | Q | A | -1.1000 | |
63 | I | A | 0.6031 | |
64 | S | A | -0.7665 | |
65 | E | A | -1.9653 | |
66 | P | A | -1.3191 | |
67 | E | A | -1.7100 | |
68 | L | A | 0.1311 | |
69 | A | A | -0.1309 | |
70 | A | A | -0.9086 | |
71 | E | A | -2.7109 | |
72 | H | A | -2.8425 | |
73 | E | A | -3.7790 | |
74 | E | A | -3.8321 | |
75 | V | A | -1.7539 | |
76 | K | A | -3.1133 | |
77 | E | A | -3.1270 | |
78 | N | A | -2.1285 | |
79 | K | A | -1.6490 | |
80 | I | A | 0.4769 | |
81 | T | A | -0.3789 | |
82 | L | A | 0.8007 | |
83 | L | A | 1.0862 | |
84 | E | A | -1.5747 | |
85 | E | A | -1.5933 | |
86 | L | A | -0.1783 | |
87 | Q | A | -2.6617 | |
88 | E | A | -4.1271 | |
89 | K | A | -4.2093 | |
90 | T | A | -3.5234 | |
91 | E | A | -4.6568 | |
92 | E | A | -4.9400 | |
93 | D | A | -5.1610 | |
94 | E | A | -4.8971 | |
95 | E | A | -4.5567 | |
96 | N | A | -3.7307 | |
97 | K | A | -3.4358 | |
98 | P | A | -1.7216 | |
99 | S | A | -0.2614 | |
100 | V | A | 1.4269 | |
101 | I | A | 1.4687 | |
102 | E | A | -1.5233 | |
103 | K | A | -1.4801 | |
104 | L | A | 0.0246 | |
105 | H | A | -1.9597 | |
106 | R | A | -2.8002 | |
107 | S | A | -2.0757 | |
108 | N | A | -2.2610 | |
109 | S | A | -1.3383 | |
110 | S | A | -0.8881 | |
111 | S | A | -0.6780 | |
112 | S | A | -0.5582 | |
113 | S | A | -0.5389 | |
114 | S | A | -1.1245 | |
115 | S | A | -1.6459 | |
116 | D | A | -3.3785 | |
117 | E | A | -3.8442 | |
118 | E | A | -3.6620 | |
119 | G | A | -3.2102 | |
120 | E | A | -3.6618 | |
121 | E | A | -4.0002 | |
122 | K | A | -4.3957 | |
123 | K | A | -4.3084 | |
124 | E | A | -4.4918 | |
125 | K | A | -4.3271 | |
126 | K | A | -3.8680 | |
127 | K | A | -3.2307 | |
128 | K | A | -1.6382 | |
129 | I | A | 0.8289 | |
130 | V | A | 0.7200 | |
131 | E | A | -1.8648 | |
132 | G | A | -2.4736 | |
133 | E | A | -4.1384 | |
134 | E | A | -4.9454 | |
135 | D | A | -4.4281 | |
136 | K | A | -3.7143 | |
137 | K | A | -3.4970 | |
138 | G | A | -1.9175 | |
139 | L | A | 0.1128 | |
140 | V | A | 0.1249 | |
141 | E | A | -2.2009 | |
142 | K | A | -1.9949 | |
143 | I | A | 0.2507 | |
144 | K | A | -1.9347 | |
145 | E | A | -3.0833 | |
146 | K | A | -2.3718 | |
147 | L | A | -0.5249 | |
148 | P | A | -1.0496 | |
149 | G | A | -1.6630 | |
150 | H | A | -2.7243 | |
151 | H | A | -2.9620 | |
152 | D | A | -3.4325 | |
153 | K | A | -3.2593 | |
154 | T | A | -2.1952 | |
155 | A | A | -1.9800 | |
156 | E | A | -3.2563 | |
157 | D | A | -3.1854 | |
158 | D | A | -2.0183 | |
159 | V | A | 0.7924 | |
160 | P | A | 1.0174 | |
161 | V | A | 1.7158 | |
162 | S | A | 0.7518 | |
163 | T | A | 0.5850 | |
164 | T | A | 1.1248 | |
165 | I | A | 2.1980 | |
166 | P | A | 1.6728 | |
167 | V | A | 2.3823 | |
168 | P | A | 1.3521 | |
169 | V | A | 1.5266 | |
170 | S | A | -0.1362 | |
171 | E | A | -1.2143 | |
172 | S | A | 0.1075 | |
173 | V | A | 1.5902 | |
174 | V | A | 1.4674 | |
175 | E | A | -1.4245 | |
176 | H | A | -2.3927 | |
177 | D | A | -3.2494 | |
178 | H | A | -2.9014 | |
179 | P | A | -2.7782 | |
180 | E | A | -3.9720 | |
181 | E | A | -4.6707 | |
182 | E | A | -4.3067 | |
183 | K | A | -3.8054 | |
184 | K | A | -3.5858 | |
185 | G | A | -1.9410 | |
186 | L | A | 0.0803 | |
187 | V | A | 0.3951 | |
188 | E | A | -2.3437 | |
189 | K | A | -1.9289 | |
190 | I | A | 0.3273 | |
191 | K | A | -1.8396 | |
192 | E | A | -3.3191 | |
193 | K | A | -2.2761 | |
194 | L | A | -0.3705 | |
195 | P | A | -0.9012 | |
196 | G | A | -1.4550 | |
197 | H | A | -2.2484 | |
198 | H | A | -3.2216 | |
199 | D | A | -4.1188 | |
200 | E | A | -4.0734 | |
201 | K | A | -3.6603 | |
202 | A | A | -2.9275 | |
203 | E | A | -3.3985 | |
204 | D | A | -2.8150 | |
205 | S | A | -1.4335 | |
206 | P | A | -0.5508 | |
207 | A | A | 0.7675 | |
208 | V | A | 1.6488 | |
209 | T | A | 0.6712 | |
210 | S | A | 0.1898 | |
211 | T | A | 0.0485 | |
212 | P | A | 0.8126 | |
213 | L | A | 2.6862 | |
214 | V | A | 3.1198 | |
215 | V | A | 2.4355 | |
216 | T | A | 0.2838 | |
217 | E | A | -1.7707 | |
218 | H | A | -1.6445 | |
219 | P | A | -0.7164 | |
220 | V | A | 0.3551 | |
221 | E | A | -1.1414 | |
222 | P | A | -0.8098 | |
223 | T | A | -0.9550 | |
224 | T | A | -0.7627 | |
225 | E | A | -1.1787 | |
226 | L | A | 0.7268 | |
227 | P | A | 0.4566 | |
228 | V | A | 0.8586 | |
229 | E | A | -1.6398 | |
230 | H | A | -2.2633 | |
231 | P | A | -2.6548 | |
232 | E | A | -4.1825 | |
233 | E | A | -4.3110 | |
234 | K | A | -3.9561 | |
235 | K | A | -3.5309 | |
236 | G | A | -1.0739 | |
237 | I | A | 1.4009 | |
238 | L | A | 1.0574 | |
239 | E | A | -1.7164 | |
240 | K | A | -1.7823 | |
241 | I | A | 0.6976 | |
242 | K | A | -1.1191 | |
243 | E | A | -2.7443 | |
244 | K | A | -2.0403 | |
245 | L | A | -0.1993 | |
246 | P | A | -0.5791 | |
247 | G | A | -0.8701 | |
248 | Y | A | -0.6809 | |
249 | H | A | -1.7238 | |
250 | A | A | -1.4232 | |
251 | K | A | -2.6448 | |
252 | T | A | -2.2056 | |
253 | T | A | -2.2888 | |
254 | E | A | -3.3180 | |
255 | E | A | -3.9594 | |
256 | E | A | -3.8258 | |
257 | V | A | -1.9992 | |
258 | K | A | -3.9989 | |
259 | K | A | -4.5418 | |
260 | E | A | -4.5488 | |
261 | K | A | -4.4929 | |
262 | E | A | -4.4863 | |
263 | S | A | -3.4622 | |
264 | D | A | -3.8051 | |
265 | D | A | -2.9401 |