Project name: protein_a4d_20260624

Status: done

Started: 2026-06-24 09:05:36
Chain sequence(s) A: MEFGLSWVFLVALFRGVQCLNFRAPPVIPNVPFLWAWNAPSEFCLGKFDEPLDMSLFSFIGSPRINATGQGVTIFYVDRLGYYPYIDSITGVTVNGGIPQKISLQDHLDKAKKDITFYMPVDNLGMAVIDWEEWRPTWARNWKPKDVYKNRSIELVQQQNVQLSLTEATEKAKQEFEKAGKDFLVETIKLGKLLRPNHLWGYYLFPDCYNHHYKKPGYNGSCFNVEIKRNDDLSWLWNESTALYPSIYLNTQQSPVAATLYVRNRVREAIRVSKIPDAKSPLPVFAYTRIVFTDQVLKFLSQDELVYTFGETVALGASGIVIWGTLSIMRSMKSCLLLDNYMETILNPYIINVTLAAKMCSQVLCQEQGVCIRKNWNSSDYLHLNPDNFAIQLEKGGKFTVRGKPTLEDLEQFSEKFYCSCYSTLSCKEKADVKDTDAVDVCIADGVCIDAFLKPPMETEEPQIFYGGGGSGGGGSGGGGSDAHKSEVAHRFKDLGEENFKALVLIAFAQYLQQCPFEDHVKLVNEVTEFAKTCVADESAENCDKSLHTLFGDKLCTVATLRETYGEMADCCAKQEPERNECFLQHKDDNPNLPRLVRPEVDVMCTAFHDNEETFLKKYLYEIARRHPYFYAPELLFFAKRYKAAFTECCQAADKAACLLPKLDELRDEGKASSAKQRLKCASLQKFGERAFKAWAVARLSQRFPKAEFAEVSKLVTDLTKVHTECCHGDLLECADDRADLAKYICENQDSISSKLKECCEKPLLEKSHCIAEVENDEMPADLPSLAADFVESKDVCKNYAEAKDVFLGMFLYEYARRHPDYSVVLLLRLAKTYETTLEKCCAAADPHECYAKVFDEFKPLVEEPQNLIKQNCELFEQLGEYKFQNALLVRYTKKVPQVSTPTLVEVSRNLGKVGSKCCKHPEAKRMPCAEDYLSVVLNQLCVLHEKTPVSDRVTKCCTESLVNRRPCFSALEVDETYVPKEFNAETFTFHADICTLSEKERQIKKQTALVELVKHKPKATKEQLKAVMDDFAAFVEKCCKADDKETCFAEEGKKLVAASQAALGL
B: MEFGLSWVFLVALFRGVQCLNFRAPPVIPNVPFLWAWNAPSEFCLGKFDEPLDMSLFSFIGSPRINATGQGVTIFYVDRLGYYPYIDSITGVTVNGGIPQKISLQDHLDKAKKDITFYMPVDNLGMAVIDWEEWRPTWARNWKPKDVYKNRSIELVQQQNVQLSLTEATEKAKQEFEKAGKDFLVETIKLGKLLRPNHLWGYYLFPDCYNHHYKKPGYNGSCFNVEIKRNDDLSWLWNESTALYPSIYLNTQQSPVAATLYVRNRVREAIRVSKIPDAKSPLPVFAYTRIVFTDQVLKFLSQDELVYTFGETVALGASGIVIWGTLSIMRSMKSCLLLDNYMETILNPYIINVTLAAKMCSQVLCQEQGVCIRKNWNSSDYLHLNPDNFAIQLEKGGKFTVRGKPTLEDLEQFSEKFYCSCYSTLSCKEKADVKDTDAVDVCIADGVCIDAFLKPPMETEEPQIFYGGGGSGGGGSGGGGSDAHKSEVAHRFKDLGEENFKALVLIAFAQYLQQCPFEDHVKLVNEVTEFAKTCVADESAENCDKSLHTLFGDKLCTVATLRETYGEMADCCAKQEPERNECFLQHKDDNPNLPRLVRPEVDVMCTAFHDNEETFLKKYLYEIARRHPYFYAPELLFFAKRYKAAFTECCQAADKAACLLPKLDELRDEGKASSAKQRLKCASLQKFGERAFKAWAVARLSQRFPKAEFAEVSKLVTDLTKVHTECCHGDLLECADDRADLAKYICENQDSISSKLKECCEKPLLEKSHCIAEVENDEMPADLPSLAADFVESKDVCKNYAEAKDVFLGMFLYEYARRHPDYSVVLLLRLAKTYETTLEKCCAAADPHECYAKVFDEFKPLVEEPQNLIKQNCELFEQLGEYKFQNALLVRYTKKVPQVSTPTLVEVSRNLGKVGSKCCKHPEAKRMPCAEDYLSVVLNQLCVLHEKTPVSDRVTKCCTESLVNRRPCFSALEVDETYVPKEFNAETFTFHADICTLSEKERQIKKQTALVELVKHKPKATKEQLKAVMDDFAAFVEKCCKADDKETCFAEEGKKLVAASQAALGL
input PDB
Selected Chain(s) A,B
Distance of aggregation 10 Å
FoldX usage Yes
pH calculations Yes
alphaCutter usage No
Dynamic mode No
Automated mutations No
Downloads Download all the data
Simulation log
[INFO]       Logger:   Verbosity set to: 2 - [INFO]                                                (00:00:03)
[WARNING]    runJob:   Working directory already exists (possibly overwriting previous results -ow 
                       to prevent this behavior)                                                   (00:00:03)
[INFO]       runJob:   Starting aggrescan3d job on: input.pdb with all chain(s) selected           (00:00:03)
[INFO]       runJob:   Creating pdb object from: input.pdb                                         (00:00:03)
[INFO]       PDB-Info: The input structure is globular. Max score is recommended for pH analysis.  (00:00:13)
[INFO]       FoldX:    Starting FoldX energy minimization                                          (00:00:13)
[INFO]       Analysis: Starting Aggrescan4D on folded.pdb                                          (00:53:50)
[INFO]       agg3D:    Running pKa-ANI on                                                          
                       /STORAGE/DATA/lcbio/aggreskan/54a4eeb429ea2af/tmp/folded.pdb                (00:53:50)
[INFO]       Main:     Simulation completed successfully.                                          (01:09:38)
Show buried residues

Minimal score value
-4.484
Maximal score value
4.5101
Average score
-0.8419
Total score value
-1794.8679

The table below lists A4D score for protein residues. Residues with A4D score > 0.0000 are marked by yellow rows.

residue index residue name chain Aggrescan4D score mutation
1 M A 0.6531
2 E A -0.2900
3 F A 1.5738
4 G A 0.9199
5 L A 2.1669
6 S A 2.1109
7 W A 3.1840
8 V A 4.2271
9 F A 4.4936
10 L A 4.3719
11 V A 4.2330
12 A A 2.8420
13 L A 2.5820
14 F A 2.2851
15 R A -0.2307
16 G A 0.1535
17 V A 1.2861
18 Q A -0.0086
19 C A 1.0626
20 L A 1.2756
21 N A 0.0387
22 F A 0.0000
23 R A 0.0000
24 A A -0.2550
25 P A -0.0632
26 P A -0.0761
27 V A 0.4405
28 I A 0.2523
29 P A -0.5085
30 N A -1.1615
31 V A -0.0384
32 P A -0.3416
33 F A 0.0000
34 L A 0.0000
35 W A 0.0000
36 A A 0.0000
37 W A 0.0000
38 N A 0.0000
39 A A 0.0000
40 P A 0.0000
41 S A 0.0000
42 E A -0.9007
43 F A -0.8261
44 C A 0.0000
45 L A -0.3977
46 G A 0.0000
47 K A -1.1313
48 F A 0.3485
49 D A -0.4733
50 E A -0.9498
51 P A -0.9361
52 L A 0.0000
53 D A -1.1074
54 M A -0.0526
55 S A -0.6070
56 L A -0.1373
57 F A 0.0000
58 S A 0.2690
59 F A 0.0000
60 I A 0.8978
61 G A 0.0000
62 S A -0.0959
63 P A 0.2406
64 R A 0.0385
65 I A 0.6514
66 N A -0.4471
67 A A -0.2843
68 T A -0.0470
69 G A -0.3613
70 Q A -0.2586
71 G A -0.0754
72 V A 0.0000
73 T A 0.0000
74 I A 0.0000
75 F A 0.0000
76 Y A -0.2120
77 V A -0.5863
78 D A -1.3259
79 R A -0.4393
80 L A 0.0000
81 G A 0.0000
82 Y A -0.4278
83 Y A 0.0000
84 P A 0.0000
85 Y A 0.0556
86 I A 0.0000
87 D A 0.2824
88 S A 0.4780
89 I A 1.6260
90 T A 0.8396
91 G A 0.3940
92 V A 0.9673
93 T A 0.3543
94 V A 0.1316
95 N A -0.2954
96 G A -0.7410
97 G A 0.0000
98 I A 0.0000
99 P A 0.0000
100 Q A -1.4667
101 K A -1.6864
102 I A -0.9669
103 S A -1.1926
104 L A -1.3756
105 Q A -2.4340
106 D A -2.9788
107 H A 0.0000
108 L A -2.3940
109 D A -3.5398
110 K A -2.7480
111 A A 0.0000
112 K A -2.6411
113 K A -2.5296
114 D A 0.0000
115 I A 0.0000
116 T A -0.2710
117 F A 0.5427
118 Y A 0.0000
119 M A 0.0000
120 P A 0.5532
121 V A 1.0317
122 D A -0.5760
123 N A -1.2424
124 L A -0.3572
125 G A 0.0000
126 M A 0.0000
127 A A 0.0000
128 V A 0.0000
129 I A 0.0000
130 D A -0.5094
131 W A 0.0000
132 E A -1.2878
133 E A -1.0280
134 W A 0.0000
135 R A -0.6559
136 P A 0.0000
137 T A -0.8079
138 W A 0.0000
139 A A -0.2636
140 R A 0.0000
141 N A 0.0000
142 W A -0.4872
143 K A -1.1239
144 P A -0.7885
145 K A -0.7545
146 D A -0.8126
147 V A -0.7315
148 Y A 0.0000
149 K A -0.9380
150 N A 0.0000
151 R A -1.0847
152 S A 0.0000
153 I A 0.0000
154 E A -0.7698
155 L A -1.0433
156 V A 0.0000
157 Q A 0.0000
158 Q A -1.3285
159 Q A -1.6004
160 N A -0.8030
161 V A 0.2630
162 Q A -0.9291
163 L A -0.5223
164 S A -0.3672
165 L A 0.2095
166 T A -1.1328
167 E A -2.5639
168 A A 0.0000
169 T A -2.0735
170 E A -3.4086
171 K A -2.9638
172 A A 0.0000
173 K A -3.1038
174 Q A -3.3102
175 E A -2.9751
176 F A 0.0000
177 E A -2.4578
178 K A -2.9520
179 A A -1.9870
180 G A 0.0000
181 K A -1.7748
182 D A -1.5229
183 F A 0.0000
184 L A 0.0000
185 V A -0.9705
186 E A -1.4483
187 T A 0.0000
188 I A 0.0000
189 K A -0.6255
190 L A -0.3344
191 G A 0.0000
192 K A -0.1431
193 L A 1.0053
194 L A 0.4251
195 R A -0.2857
196 P A -0.7714
197 N A -1.3397
198 H A 0.0000
199 L A -0.0926
200 W A 0.0000
201 G A 0.0000
202 Y A 0.0000
203 Y A 0.0577
204 L A 0.1467
205 F A 0.2046
206 P A 0.0000
207 D A 0.0000
208 C A 0.0000
209 Y A 0.0000
210 N A 0.0000
211 H A -0.9885
212 H A -1.4398
213 Y A -1.2682
214 K A -2.2441
215 K A -1.8709
216 P A -1.2355
217 G A -1.1947
218 Y A -1.0493
219 N A -1.1263
220 G A 0.0000
221 S A -0.5537
222 C A -0.0949
223 F A 0.1685
224 N A -0.9125
225 V A -0.2590
226 E A 0.0000
227 I A -0.9911
228 K A -2.3033
229 R A -1.7023
230 N A 0.0000
231 D A -2.0374
232 D A -2.5705
233 L A 0.0000
234 S A -1.0569
235 W A -0.7467
236 L A 0.0000
237 W A 0.0000
238 N A -1.4498
239 E A -1.1205
240 S A 0.0000
241 T A -0.3998
242 A A 0.0000
243 L A 0.0000
244 Y A 0.0000
245 P A 0.0000
246 S A 0.0000
247 I A 0.0000
248 Y A 0.1711
249 L A 0.0000
250 N A -0.9724
251 T A -1.3927
252 Q A -1.7552
253 Q A -0.8465
254 S A -0.2332
255 P A 0.0908
256 V A 1.5123
257 A A 0.0000
258 A A 0.0000
259 T A 0.0000
260 L A 0.0992
261 Y A 0.0000
262 V A 0.0000
263 R A 0.0000
264 N A 0.0000
265 R A 0.0000
266 V A 0.0000
267 R A -1.4943
268 E A 0.0000
269 A A 0.0000
270 I A 0.0000
271 R A -0.9853
272 V A 0.0000
273 S A 0.0000
274 K A -1.1944
275 I A -0.7142
276 P A -1.1965
277 D A -1.9725
278 A A -1.2281
279 K A -1.8030
280 S A -1.4218
281 P A 0.0000
282 L A -0.4816
283 P A 0.0555
284 V A 0.0000
285 F A 0.0000
286 A A 0.0000
287 Y A 0.0000
288 T A 0.0000
289 R A 0.0000
290 I A 0.0000
291 V A 0.0000
292 F A 0.0000
293 T A -0.6296
294 D A -1.5069
295 Q A -1.1111
296 V A 0.2525
297 L A 0.4944
298 K A -1.0162
299 F A -0.0814
300 L A 0.0000
301 S A -1.1750
302 Q A -1.5843
303 D A -2.2735
304 E A -1.3548
305 L A 0.0000
306 V A -0.6993
307 Y A -0.1703
308 T A 0.0000
309 F A 0.0000
310 G A 0.0000
311 E A 0.0000
312 T A 0.0000
313 V A 0.0000
314 A A 0.0000
315 L A 0.0000
316 G A 0.0000
317 A A 0.0000
318 S A 0.0880
319 G A 0.0000
320 I A 0.0000
321 V A 0.0000
322 I A 0.0000
323 W A 0.2142
324 G A 0.0000
325 T A 0.3940
326 L A 0.5660
327 S A 0.4269
328 I A 0.0000
329 M A 0.0000
330 R A -1.5783
331 S A -0.7865
332 M A -0.4101
333 K A -1.2981
334 S A 0.0000
335 C A 0.0000
336 L A 0.1956
337 L A 0.7361
338 L A 0.0000
339 D A -0.7368
340 N A -0.4353
341 Y A 0.0000
342 M A 0.0000
343 E A -1.2559
344 T A -0.6400
345 I A -0.1989
346 L A 0.0000
347 N A 0.0000
348 P A -0.2961
349 Y A 0.0000
350 I A 0.0000
351 I A 0.0000
352 N A -0.2855
353 V A 0.0000
354 T A 0.0000
355 L A 0.0000
356 A A 0.0000
357 A A -0.1380
358 K A -0.5685
359 M A 0.0000
360 C A 0.0000
361 S A 0.0000
362 Q A -1.4955
363 V A 0.0000
364 L A 0.0000
365 C A 0.0000
366 Q A -2.3430
367 E A -2.0433
368 Q A -1.5799
369 G A 0.0000
370 V A -0.2250
371 C A 0.0000
372 I A 0.0000
373 R A 0.0000
374 K A -2.3166
375 N A -2.2611
376 W A -1.5306
377 N A -1.8631
378 S A -1.3364
379 S A -0.7492
380 D A -1.1390
381 Y A -0.1615
382 L A 0.0000
383 H A -0.4280
384 L A 0.0000
385 N A -1.6241
386 P A -1.4084
387 D A -2.3681
388 N A -2.1825
389 F A 0.0000
390 A A -1.3474
391 I A -0.5653
392 Q A -1.6598
393 L A -1.2720
394 E A -2.0675
395 K A -2.6038
396 G A -1.7498
397 G A -2.1254
398 K A -2.5444
399 F A 0.0000
400 T A -1.2106
401 V A -1.3410
402 R A -2.5606
403 G A -2.5097
404 K A -2.4542
405 P A 0.0000
406 T A -1.1947
407 L A -1.8129
408 E A -2.3778
409 D A 0.0000
410 L A 0.0000
411 E A -2.7707
412 Q A -2.5786
413 F A 0.0000
414 S A -2.3566
415 E A -2.8240
416 K A -2.5108
417 F A 0.0000
418 Y A -0.8316
419 C A -0.9305
420 S A 0.0000
421 C A -0.5975
422 Y A 0.0000
423 S A -0.5649
424 T A -0.1942
425 L A 0.0430
426 S A -0.1468
427 C A -1.4153
428 K A -2.5445
429 E A -2.6132
430 K A -2.4934
431 A A -1.9844
432 D A -3.0344
433 V A 0.0000
434 K A -3.3748
435 D A -3.4490
436 T A 0.0000
437 D A -2.1016
438 A A -1.2917
439 V A 0.0000
440 D A -2.2118
441 V A 0.0000
442 C A -0.5832
443 I A 0.1001
444 A A -0.7309
445 D A -1.9035
446 G A -1.1140
447 V A 0.0000
448 C A -1.0553
449 I A 0.0000
450 D A -2.5606
451 A A -1.1382
452 F A 0.4113
453 L A -0.5557
454 K A -0.8955
455 P A -0.4601
456 P A -0.4457
457 M A -0.4077
458 E A -2.2965
459 T A -2.1820
460 E A -3.4261
461 E A -3.1660
462 P A -1.4105
463 Q A -0.3206
464 I A 2.3587
465 F A 2.9543
466 Y A 2.2544
467 G A 0.6472
468 G A -0.3625
469 G A -0.9974
470 G A -1.2012
471 S A -1.0876
472 G A -1.2158
473 G A -1.2337
474 G A -1.2298
475 G A -1.2325
476 S A -1.1018
477 G A -1.2446
478 G A -1.2465
479 G A -1.4684
480 G A -1.5899
481 S A -1.6639
482 D A -2.6120
483 A A -1.9845
484 H A -2.9111
485 K A -3.4601
486 S A 0.0000
487 E A -2.1165
488 V A 0.0000
489 A A -2.0312
490 H A -1.9177
491 R A 0.0000
492 F A 0.0000
493 K A -2.9250
494 D A -2.9018
495 L A -2.1472
496 G A -2.4737
497 E A -3.0924
498 E A -2.7811
499 N A -2.0444
500 F A 0.0000
501 K A -1.5538
502 A A -0.9812
503 L A 0.0000
504 V A 0.0000
505 L A 0.0000
506 I A 0.0000
507 A A 0.0000
508 F A 0.0000
509 A A 0.0000
510 Q A 0.0000
511 Y A 0.0000
512 L A 0.0000
513 Q A 0.0000
514 Q A -0.4276
515 C A 0.0000
516 P A -1.1439
517 F A 0.0000
518 E A -2.7988
519 D A -2.4765
520 H A 0.0000
521 V A -2.1682
522 K A -3.2041
523 L A 0.0000
524 V A 0.0000
525 N A -2.9197
526 E A -3.3122
527 V A 0.0000
528 T A 0.0000
529 E A -2.9118
530 F A -1.7432
531 A A 0.0000
532 K A -2.2278
533 T A -1.6679
534 C A 0.0000
535 V A -1.3342
536 A A -1.1647
537 D A -2.6188
538 E A -3.4055
539 S A -2.4736
540 A A -2.2358
541 E A -2.9089
542 N A -2.3912
543 C A 0.0000
544 D A -3.6295
545 K A -2.3593
546 S A -1.2026
547 L A 0.0000
548 H A -0.8637
549 T A -1.0731
550 L A -0.8826
551 F A 0.0000
552 G A 0.0000
553 D A -1.4230
554 K A -1.2205
555 L A 0.0000
556 C A -0.3963
557 T A -0.3739
558 V A 0.0000
559 A A -0.1523
560 T A -0.1938
561 L A 0.0000
562 R A -0.9648
563 E A -0.7110
564 T A -0.6373
565 Y A 0.0000
566 G A -1.3637
567 E A -2.3180
568 M A 0.0000
569 A A 0.0000
570 D A -1.3547
571 C A 0.0000
572 C A -1.0138
573 A A -1.1913
574 K A -2.0549
575 Q A -2.5148
576 E A -2.1322
577 P A -1.9566
578 E A -2.7727
579 R A 0.0000
580 N A 0.0000
581 E A -1.5222
582 C A -1.5771
583 F A 0.0000
584 L A 0.0000
585 Q A -1.3731
586 H A -1.1359
587 K A 0.0000
588 D A 0.0000
589 D A -1.3600
590 N A -1.8796
591 P A 0.0000
592 N A -1.8893
593 L A -1.0954
594 P A -0.6794
595 R A -1.1815
596 L A 0.9869
597 V A 1.1182
598 R A -0.5012
599 P A -0.8938
600 E A -1.9876
601 V A 0.0000
602 D A -1.6600
603 V A 0.0969
604 M A 0.0000
605 C A 0.0000
606 T A -0.9648
607 A A -1.0382
608 F A 0.0000
609 H A -2.5252
610 D A -3.0554
611 N A -2.8681
612 E A -2.8740
613 E A -2.8802
614 T A -1.6579
615 F A -1.4552
616 L A -1.1161
617 K A -0.9251
618 K A -1.0783
619 Y A -0.1261
620 L A 0.0000
621 Y A 0.0000
622 E A -0.0954
623 I A -0.2360
624 A A 0.0000
625 R A -0.4850
626 R A -0.8392
627 H A -0.7245
628 P A 0.0000
629 Y A -0.2550
630 F A 0.0000
631 Y A 0.0000
632 A A 0.0000
633 P A 0.0000
634 E A 0.0000
635 L A 0.0000
636 L A 0.0000
637 F A 0.0000
638 F A 0.0000
639 A A -0.5104
640 K A -1.0999
641 R A -0.9264
642 Y A -0.7490
643 K A -1.4005
644 A A -1.1102
645 A A 0.0000
646 F A 0.0000
647 T A -1.5463
648 E A -2.3229
649 C A 0.0000
650 C A 0.0000
651 Q A -2.0994
652 A A -1.7398
653 A A -1.2456
654 D A -2.2164
655 K A -2.2225
656 A A -1.3004
657 A A -0.6693
658 C A -1.0170
659 L A 0.0000
660 L A -0.6910
661 P A -1.3991
662 K A -1.8469
663 L A -2.2697
664 D A -3.4834
665 E A -4.1686
666 L A 0.0000
667 R A -4.3556
668 D A -4.4840
669 E A -3.3615
670 G A -2.8723
671 K A -3.2106
672 A A -1.9888
673 S A -1.5366
674 S A -1.0879
675 A A -1.1369
676 K A -1.4069
677 Q A 0.0000
678 R A -0.7286
679 L A 0.0000
680 K A -0.8126
681 C A 0.0000
682 A A 0.0000
683 S A 0.0000
684 L A 0.0000
685 Q A -0.4949
686 K A -0.3899
687 F A -0.9450
688 G A -1.5041
689 E A -2.8315
690 R A -3.0373
691 A A -1.6117
692 F A 0.0000
693 K A -1.9514
694 A A -1.3462
695 W A -0.7263
696 A A 0.0000
697 V A 0.0000
698 A A 0.0000
699 R A -0.7072
700 L A -0.2826
701 S A 0.0000
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504 V B 0.0000
505 L B 0.0000
506 I B 0.0000
507 A B 0.0000
508 F B 0.0000
509 A B 0.0000
510 Q B 0.0000
511 Y B 0.0000
512 L B 0.0000
513 Q B 0.0000
514 Q B -0.4262
515 C B 0.0000
516 P B -0.8870
517 F B -1.2778
518 E B -2.4249
519 D B -1.9856
520 H B 0.0000
521 V B -1.7613
522 K B -2.5809
523 L B 0.0000
524 V B 0.0000
525 N B -2.5815
526 E B -3.0437
527 V B 0.0000
528 T B 0.0000
529 E B -2.8513
530 F B -1.7260
531 A B 0.0000
532 K B -2.2129
533 T B -1.6068
534 C B 0.0000
535 V B -1.3181
536 A B -1.0389
537 D B -2.4585
538 E B -2.9800
539 S B -2.2479
540 A B -2.0632
541 E B -2.7826
542 N B -2.2257
543 C B 0.0000
544 D B -3.4897
545 K B -2.2710
546 S B -1.1770
547 L B 0.0000
548 H B -0.8532
549 T B -1.0184
550 L B -0.8681
551 F B 0.0000
552 G B 0.0000
553 D B -1.4005
554 K B -1.2026
555 L B 0.0000
556 C B -0.3439
557 T B -0.2917
558 V B -0.1519
559 A B -0.0219
560 T B -0.1080
561 L B 0.0000
562 R B -0.8965
563 E B -0.6459
564 T B -0.6220
565 Y B 0.0000
566 G B -1.3397
567 E B -2.1349
568 M B 0.0000
569 A B 0.0000
570 D B -1.4386
571 C B 0.0000
572 C B -1.1232
573 A B -1.4144
574 K B -2.3357
575 Q B -2.5581
576 E B -2.0561
577 P B -1.9482
578 E B -2.8523
579 R B 0.0000
580 N B 0.0000
581 E B -1.6925
582 C B -1.8098
583 F B 0.0000
584 L B 0.0000
585 Q B -1.3915
586 H B -1.2195
587 K B 0.0000
588 D B -1.4753
589 D B -1.5541
590 N B -2.0456
591 P B 0.0000
592 N B -1.9555
593 L B -1.0698
594 P B 0.0000
595 R B -1.2500
596 L B 0.8260
597 V B 0.5495
598 R B -0.8439
599 P B -1.0129
600 E B -2.0516
601 V B 0.0000
602 D B -1.6470
603 V B -0.0265
604 M B 0.0000
605 C B 0.0000
606 T B -0.9681
607 A B -1.0429
608 F B 0.0000
609 H B -2.5333
610 D B -3.0588
611 N B -2.8769
612 E B -2.9260
613 E B -2.9075
614 T B -1.6535
615 F B -1.4736
616 L B -1.1167
617 K B -0.8898
618 K B -0.9530
619 Y B -0.0552
620 L B 0.0000
621 Y B 0.0000
622 E B 0.0000
623 I B -0.1049
624 A B 0.0000
625 R B -0.4315
626 R B -0.8011
627 H B -0.7211
628 P B 0.0000
629 Y B -0.2601
630 F B 0.0000
631 Y B 0.0000
632 A B 0.0000
633 P B 0.0000
634 E B 0.0000
635 L B 0.0000
636 L B 0.0000
637 F B 0.0000
638 F B 0.0000
639 A B -0.5043
640 K B -1.1059
641 R B -0.9699
642 Y B -0.7496
643 K B -1.4195
644 A B -1.1268
645 A B 0.0000
646 F B 0.0000
647 T B -1.5590
648 E B -2.3192
649 C B 0.0000
650 C B 0.0000
651 Q B -2.0887
652 A B -1.7206
653 A B -1.2298
654 D B -2.1886
655 K B -2.1669
656 A B -1.2854
657 A B -0.6671
658 C B -1.0229
659 L B 0.0000
660 L B -0.7595
661 P B -1.4886
662 K B -2.0015
663 L B -2.3465
664 D B -3.5730
665 E B -4.2095
666 L B 0.0000
667 R B -4.2188
668 D B -4.4088
669 E B -3.3107
670 G B -2.8008
671 K B -3.1203
672 A B -1.9501
673 S B -1.5156
674 S B -1.0734
675 A B -1.1200
676 K B -1.4176
677 Q B 0.0000
678 R B -0.7197
679 L B 0.0000
680 K B -0.8443
681 C B 0.0000
682 A B 0.0000
683 S B 0.0000
684 L B 0.0000
685 Q B -0.8966
686 K B -0.6380
687 F B -0.9400
688 G B -1.7532
689 E B -2.9160
690 R B -2.6366
691 A B -1.4517
692 F B 0.0000
693 K B -1.9090
694 A B -1.2729
695 W B -0.6991
696 A B 0.0000
697 V B 0.0000
698 A B 0.0000
699 R B -0.7537
700 L B 0.0000
701 S B 0.0000
702 Q B 0.0000
703 R B -1.6621
704 F B 0.0000
705 P B 0.0000
706 K B -2.0031
707 A B 0.0000
708 E B -2.0937
709 F B -0.7431
710 A B -0.7241
711 E B -1.1202
712 V B 0.0000
713 S B -0.6308
714 K B -0.9251
715 L B 0.0000
716 V B 0.0000
717 T B -1.1664
718 D B -1.2110
719 L B -0.5977
720 T B 0.0000
721 K B -1.6520
722 V B 0.0000
723 H B 0.0000
724 T B -1.1123
725 E B -0.8861
726 C B 0.0000
727 C B 0.0000
728 H B -0.6063
729 G B 0.0000
730 D B -0.5308
731 L B 0.0000
732 L B 0.0000
733 E B -0.9959
734 C B 0.0000
735 A B 0.0000
736 D B -1.3561
737 D B -1.6203
738 R B 0.0000
739 A B -1.4785
740 D B -2.4761
741 L B 0.0000
742 A B 0.0000
743 K B -2.6865
744 Y B -1.7719
745 I B 0.0000
746 C B -2.5669
747 E B -2.6393
748 N B -2.0529
749 Q B -2.3157
750 D B -2.7615
751 S B -2.0050
752 I B 0.0000
753 S B 0.0000
754 S B -2.0247
755 K B -2.6965
756 L B 0.0000
757 K B -3.0478
758 E B -3.2830
759 C B 0.0000
760 C B -2.6974
761 E B -3.0846
762 K B -2.3838
763 P B -0.8926
764 L B -0.3852
765 L B -0.1195
766 E B -1.0943
767 K B -1.3818
768 S B 0.0000
769 H B -0.7864
770 C B -1.2914
771 I B 0.0000
772 A B -1.2074
773 E B -2.3233
774 V B 0.0000
775 E B -2.9470
776 N B -2.3228
777 D B 0.0000
778 E B -2.3361
779 M B -1.1317
780 P B -0.9696
781 A B -1.0430
782 D B -1.6807
783 L B -0.7573
784 P B -0.9436
785 S B -1.0154
786 L B 0.0000
787 A B -1.0611
788 A B -1.8103
789 D B -2.8257
790 F B 0.0000
791 V B 0.0000
792 E B -3.1816
793 S B -3.0235
794 K B -3.6682
795 D B -3.9372
796 V B 0.0000
797 C B -2.4533
798 K B -3.5649
799 N B -3.0639
800 Y B 0.0000
801 A B -2.5338
802 E B -2.7720
803 A B -1.7213
804 K B -2.2216
805 D B -1.7384
806 V B 0.3344
807 F B 0.0000
808 L B 0.0000
809 G B -0.0483
810 M B 0.3646
811 F B 0.0000
812 L B 0.0000
813 Y B 0.0000
814 E B -0.5945
815 Y B 0.0000
816 A B 0.0000
817 R B 0.0000
818 R B -0.4157
819 H B -0.5103
820 P B -1.0776
821 D B -1.4855
822 Y B -0.6328
823 S B 0.0000
824 V B 0.0000
825 V B 0.0000
826 L B 0.0000
827 L B 0.0000
828 L B 0.0000
829 R B 0.0000
830 L B 0.0000
831 A B -0.7164
832 K B -1.4142
833 T B -1.0712
834 Y B 0.0000
835 E B -1.7555
836 T B -1.5669
837 T B 0.0000
838 L B 0.0000
839 E B -2.6881
840 K B -2.5110
841 C B 0.0000
842 C B -1.3155
843 A B -0.9937
844 A B -1.2891
845 A B -1.0050
846 D B -2.3403
847 P B -2.0900
848 H B -2.7493
849 E B -2.8973
850 C B -1.8347
851 Y B 0.0000
852 A B -1.9453
853 K B -2.6684
854 V B 0.0000
855 F B -1.6423
856 D B -3.2600
857 E B -2.9131
858 F B 0.0000
859 K B -3.0160
860 P B -2.2794
861 L B -1.4604
862 V B -1.6579
863 E B -2.6283
864 E B -2.0799
865 P B 0.0000
866 Q B -2.5632
867 N B -2.4392
868 L B -1.6227
869 I B 0.0000
870 K B -3.1131
871 Q B -2.6402
872 N B -1.9374
873 C B 0.0000
874 E B -3.2758
875 L B -2.1867
876 F B -2.3011
877 E B -3.1057
878 Q B -2.5609
879 L B -1.6630
880 G B -1.6027
881 E B -1.8095
882 Y B -1.3033
883 K B -1.8556
884 F B 0.0000
885 Q B 0.0000
886 N B -1.1301
887 A B -0.8055
888 L B -0.5635
889 L B 0.0000
890 V B 0.0000
891 R B -1.1140
892 Y B 0.0000
893 T B 0.0000
894 K B -1.1988
895 K B -1.0871
896 V B 0.0000
897 P B 0.0000
898 Q B -0.5872
899 V B 0.0000
900 S B -0.1463
901 T B 0.0000
902 P B -0.6140
903 T B -0.7430
904 L B 0.0000
905 V B 0.0000
906 E B -1.8518
907 V B 0.0000
908 S B 0.0000
909 R B -1.0935
910 N B -0.9927
911 L B 0.0000
912 G B 0.0000
913 K B -1.2754
914 V B 0.0000
915 G B 0.0000
916 S B -1.6019
917 K B -1.5495
918 C B 0.0000
919 C B 0.0000
920 K B -2.7112
921 H B -2.1903
922 P B -2.1675
923 E B -3.1339
924 A B -2.0233
925 K B -2.6249
926 R B -2.4698
927 M B 0.0000
928 P B -0.7092
929 C B -0.6110
930 A B 0.0000
931 E B 0.0000
932 D B -0.2122
933 Y B -0.2285
934 L B 0.0264
935 S B 0.0000
936 V B 0.0000
937 V B 0.0000
938 L B 0.0000
939 N B 0.0000
940 Q B -0.5514
941 L B 0.0000
942 C B 0.0000
943 V B 0.0000
944 L B -0.7887
945 H B 0.0000
946 E B -1.1888
947 K B -1.7880
948 T B -0.5006
949 P B -0.5842
950 V B -0.1086
951 S B 0.0000
952 D B -2.0852
953 R B -1.3916
954 V B 0.0000
955 T B -1.4807
956 K B -1.9316
957 C B 0.0000
958 C B 0.0000
959 T B -1.4155
960 E B -2.1955
961 S B -1.1516
962 L B 0.0000
963 V B -0.5274
964 N B -0.9582
965 R B 0.0000
966 R B 0.0000
967 P B -0.2388
968 C B -0.4345
969 F B 0.0000
970 S B -0.4140
971 A B -0.2700
972 L B -0.7318
973 E B -1.8333
974 V B -1.0613
975 D B 0.0000
976 E B -1.8218
977 T B -0.3415
978 Y B 0.1539
979 V B 0.8383
980 P B -0.5567
981 K B -1.8578
982 E B -2.2386
983 F B -1.1818
984 N B -1.6228
985 A B -1.3262
986 E B -1.8685
987 T B -0.9617
988 F B -0.6057
989 T B -1.0062
990 F B -1.2099
991 H B -1.7644
992 A B -1.8989
993 D B -2.1782
994 I B 0.0000
995 C B -1.3840
996 T B -0.8127
997 L B -1.4422
998 S B -1.7921
999 E B -3.1355
1000 K B -3.1734
1001 E B -2.5371
1002 R B -2.3419
1003 Q B -1.9598
1004 I B -1.5436
1005 K B -1.6302
1006 K B -1.0295
1007 Q B 0.0000
1008 T B -0.6823
1009 A B 0.0000
1010 L B 0.0000
1011 V B 0.0000
1012 E B -0.7767
1013 L B 0.0000
1014 V B 0.0000
1015 K B 0.0000
1016 H B 0.0000
1017 K B -0.9992
1018 P B 0.0000
1019 K B -2.1912
1020 A B 0.0000
1021 T B -2.2583
1022 K B -3.2197
1023 E B -3.3902
1024 Q B -2.7270
1025 L B 0.0000
1026 K B -3.6236
1027 A B -2.6945
1028 V B 0.0000
1029 M B -2.1971
1030 D B -3.0728
1031 D B -2.9598
1032 F B 0.0000
1033 A B -1.8192
1034 A B -1.9844
1035 F B 0.0000
1036 V B 0.0000
1037 E B -2.9546
1038 K B -2.7908
1039 C B 0.0000
1040 C B -2.7410
1041 K B -3.2167
1042 A B -3.0228
1043 D B -3.1971
1044 D B -3.2067
1045 K B -3.2248
1046 E B -2.9100
1047 T B -2.1579
1048 C B -2.6216
1049 F B 0.0000
1050 A B -2.2266
1051 E B -3.1919
1052 E B -2.8398
1053 G B -2.1673
1054 K B -3.0781
1055 K B -2.9870
1056 L B -1.7550
1057 V B -0.7733
1058 A B -0.7053
1059 A B -0.5718
1060 S B -0.4741
1061 Q B 0.2016
1062 A B 0.3578
1063 A B 0.0898
1064 L B 0.0000
1065 G B 0.2151
1066 L B 1.2810
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Calculations for various pH values

This page contains details and comparisons for all models calculated at different pH points.
Please find suggestions on interpreting the results below. More details can be found in the Tutorial.
The input structure is globular. Max score is recommended for pH analysis.

pH
Average A4D Score
Max A4D Score
4.0 -0.5257 7.3563 View CSV PDB
4.5 -0.6151 7.3563 View CSV PDB
5.0 -0.7245 7.3563 View CSV PDB
5.5 -0.8336 7.3563 View CSV PDB
6.0 -0.9206 7.3563 View CSV PDB
6.5 -0.9694 7.3563 View CSV PDB
7.0 -0.9792 7.3563 View CSV PDB
7.5 -0.9622 7.3563 View CSV PDB
8.0 -0.9303 7.3563 View CSV PDB
8.5 -0.8878 7.3563 View CSV PDB
9.0 -0.8339 7.3563 View CSV PDB