Chain sequence(s) |
A: AQPKSGFSTDRPLWYPGAKAPEYLDGSLVGDYGFDPFGLGKPAEYLQYDYDGLDQNLAKNLAGDIIGTRTESADVKSTSLQPYSEVFGLQRFRECELIHGRWAMLATLGALTVEGLTGITWQDAGKVELIEGSSYLGQPLPFSMTTLIWIEVLVIGYIEFQRNAELDTEKRLYPGGTFDPLGLASDPEKKPILQLAEIKHARLAMVGFLGFAVQAAVTGKGPLNNWVTHLSDPLHTTILDRFL
input PDB |
Selected Chain(s) | A |
Distance of aggregation | 10 Å |
FoldX usage | No |
pH calculations | No |
alphaCutter usage | No |
Dynamic mode | No |
Automated mutations | No |
Downloads | Download all the data |
Simulation log |
[INFO] Logger: Verbosity set to: 2 - [INFO] (00:00:00) [WARNING] runJob: Working directory already exists (possibly overwriting previous results -ow to prevent this behavior) (00:00:00) [INFO] runJob: Starting aggrescan3d job on: input.pdb with A chain(s) selected (00:00:00) [INFO] runJob: Creating pdb object from: input.pdb (00:00:00) [INFO] runJob: FoldX not utilized. Treating input pdb file as it was already optimized. (00:00:01) [INFO] Analysis: Starting Aggrescan4D on folded.pdb (00:00:01) [INFO] Main: Simulation completed successfully. (00:00:03) |
The table below lists A4D score for protein residues. Residues with A4D score > 0.0000 are marked by yellow rows.
residue index | residue name | chain | Aggrescan4D score | mutation |
---|---|---|---|---|
1 | A | A | -0.8191 | |
2 | Q | A | -1.7720 | |
3 | P | A | -1.7647 | |
4 | K | A | -2.1058 | |
5 | S | A | -1.1852 | |
6 | G | A | -0.4445 | |
7 | F | A | 0.4052 | |
8 | S | A | -0.3998 | |
9 | T | A | -0.8962 | |
10 | D | A | -1.7504 | |
11 | R | A | -1.0973 | |
12 | P | A | -0.3214 | |
13 | L | A | 0.7658 | |
14 | W | A | 1.8766 | |
15 | Y | A | 1.2744 | |
16 | P | A | -0.0061 | |
17 | G | A | -0.5816 | |
18 | A | A | -0.2718 | |
19 | K | A | -1.4879 | |
20 | A | A | -0.6891 | |
21 | P | A | -1.4559 | |
22 | E | A | -2.1150 | |
23 | Y | A | -1.3641 | |
24 | L | A | 0.0000 | |
25 | D | A | -1.2053 | |
26 | G | A | -0.3875 | |
27 | S | A | -0.2599 | |
28 | L | A | 0.2039 | |
29 | V | A | 0.8074 | |
30 | G | A | 0.0000 | |
31 | D | A | 0.4078 | |
32 | Y | A | 1.0474 | |
33 | G | A | 0.0000 | |
34 | F | A | 2.2463 | |
35 | D | A | 1.3701 | |
36 | P | A | 1.2411 | |
37 | F | A | 2.1460 | |
38 | G | A | 0.9991 | |
39 | L | A | 1.7703 | |
40 | G | A | 0.7043 | |
41 | K | A | -1.3067 | |
42 | P | A | -1.0676 | |
43 | A | A | -1.0302 | |
44 | E | A | -1.9755 | |
45 | Y | A | -0.0825 | |
46 | L | A | 1.7049 | |
47 | Q | A | 1.1303 | |
48 | Y | A | 1.5044 | |
49 | D | A | -0.1977 | |
50 | Y | A | 0.2283 | |
51 | D | A | -1.1003 | |
52 | G | A | -0.3793 | |
53 | L | A | 0.3710 | |
54 | D | A | -1.1059 | |
55 | Q | A | -1.7319 | |
56 | N | A | -1.4840 | |
57 | L | A | -0.0594 | |
58 | A | A | -0.7970 | |
59 | K | A | -1.4843 | |
60 | N | A | -1.0816 | |
61 | L | A | 0.4159 | |
62 | A | A | -0.4266 | |
63 | G | A | -0.5277 | |
64 | D | A | -0.4232 | |
65 | I | A | 2.3140 | |
66 | I | A | 2.2776 | |
67 | G | A | 1.2181 | |
68 | T | A | 0.2958 | |
69 | R | A | -1.0539 | |
70 | T | A | -1.4134 | |
71 | E | A | -1.7063 | |
72 | S | A | -1.1659 | |
73 | A | A | -1.0514 | |
74 | D | A | -2.2485 | |
75 | V | A | -1.6546 | |
76 | K | A | -2.0591 | |
77 | S | A | -0.9010 | |
78 | T | A | -0.5840 | |
79 | S | A | 0.1555 | |
80 | L | A | 0.8352 | |
81 | Q | A | -0.7509 | |
82 | P | A | -1.1900 | |
83 | Y | A | 0.0000 | |
84 | S | A | -0.9831 | |
85 | E | A | -0.0544 | |
86 | V | A | 1.4288 | |
87 | F | A | 1.7256 | |
88 | G | A | 0.0000 | |
89 | L | A | 0.8190 | |
90 | Q | A | -0.1939 | |
91 | R | A | 0.2462 | |
92 | F | A | 1.0066 | |
93 | R | A | 0.0250 | |
94 | E | A | 0.0000 | |
95 | C | A | 0.0135 | |
96 | E | A | -0.5695 | |
97 | L | A | 0.0000 | |
98 | I | A | 0.0878 | |
99 | H | A | -0.6160 | |
100 | G | A | 0.0000 | |
101 | R | A | 0.1273 | |
102 | W | A | 1.3688 | |
103 | A | A | 0.0000 | |
104 | M | A | 1.4900 | |
105 | L | A | 2.3780 | |
106 | A | A | 1.7207 | |
107 | T | A | 1.9230 | |
108 | L | A | 2.2714 | |
109 | G | A | 1.2191 | |
110 | A | A | 0.0000 | |
111 | L | A | 1.2827 | |
112 | T | A | 1.1156 | |
113 | V | A | 1.6165 | |
114 | E | A | 0.0000 | |
115 | G | A | 0.4558 | |
116 | L | A | 1.7390 | |
117 | T | A | 1.1270 | |
118 | G | A | 0.2009 | |
119 | I | A | 0.3536 | |
120 | T | A | -0.3406 | |
121 | W | A | -0.2697 | |
122 | Q | A | -1.0897 | |
123 | D | A | -1.7713 | |
124 | A | A | -0.8165 | |
125 | G | A | -0.9801 | |
126 | K | A | -1.4826 | |
127 | V | A | -0.4602 | |
128 | E | A | -0.2193 | |
129 | L | A | 1.2042 | |
130 | I | A | 1.2807 | |
131 | E | A | -0.8741 | |
132 | G | A | -0.1456 | |
133 | S | A | 0.4441 | |
134 | S | A | 0.3866 | |
135 | Y | A | 1.5678 | |
136 | L | A | 1.9042 | |
137 | G | A | 0.3105 | |
138 | Q | A | -0.4629 | |
139 | P | A | -0.2721 | |
140 | L | A | 0.7152 | |
141 | P | A | 0.4890 | |
142 | F | A | 1.2487 | |
143 | S | A | 1.0848 | |
144 | M | A | 1.7865 | |
145 | T | A | 1.3240 | |
146 | T | A | 1.5686 | |
147 | L | A | 2.4424 | |
148 | I | A | 3.2715 | |
149 | W | A | 3.6127 | |
150 | I | A | 3.2955 | |
151 | E | A | 2.1355 | |
152 | V | A | 4.0141 | |
153 | L | A | 4.4253 | |
154 | V | A | 4.1022 | |
155 | I | A | 3.1991 | |
156 | G | A | 2.9127 | |
157 | Y | A | 3.3484 | |
158 | I | A | 2.8258 | |
159 | E | A | 1.1190 | |
160 | F | A | 1.8236 | |
161 | Q | A | -0.0620 | |
162 | R | A | -0.6864 | |
163 | N | A | -0.3162 | |
164 | A | A | -0.6036 | |
165 | E | A | -1.4038 | |
166 | L | A | -0.8263 | |
167 | D | A | -1.8121 | |
168 | T | A | -1.8175 | |
169 | E | A | -2.6678 | |
170 | K | A | -2.6094 | |
171 | R | A | 0.0000 | |
172 | L | A | 0.0000 | |
173 | Y | A | -0.7135 | |
174 | P | A | -1.0747 | |
175 | G | A | -0.0726 | |
176 | G | A | -0.1468 | |
177 | T | A | 0.5363 | |
178 | F | A | 1.6478 | |
179 | D | A | 0.9848 | |
180 | P | A | 0.8749 | |
181 | L | A | 1.8542 | |
182 | G | A | 1.0121 | |
183 | L | A | 1.2554 | |
184 | A | A | -0.1311 | |
185 | S | A | -0.8406 | |
186 | D | A | -1.9497 | |
187 | P | A | -1.9005 | |
188 | E | A | -2.7426 | |
189 | K | A | -2.0428 | |
190 | K | A | -1.1870 | |
191 | P | A | -0.0797 | |
192 | I | A | 1.3683 | |
193 | L | A | 1.1203 | |
194 | Q | A | 0.4819 | |
195 | L | A | 0.6610 | |
196 | A | A | 0.1756 | |
197 | E | A | -0.4150 | |
198 | I | A | 0.0000 | |
199 | K | A | -1.3837 | |
200 | H | A | -1.1248 | |
201 | A | A | 0.0000 | |
202 | R | A | -0.3623 | |
203 | L | A | 1.2499 | |
204 | A | A | 1.5702 | |
205 | M | A | 1.6982 | |
206 | V | A | 2.7788 | |
207 | G | A | 1.9191 | |
208 | F | A | 2.4507 | |
209 | L | A | 2.6680 | |
210 | G | A | 1.5662 | |
211 | F | A | 1.3028 | |
212 | A | A | 1.2427 | |
213 | V | A | 1.3948 | |
214 | Q | A | 0.3776 | |
215 | A | A | 0.0429 | |
216 | A | A | 0.1861 | |
217 | V | A | 0.3500 | |
218 | T | A | -0.6145 | |
219 | G | A | -0.8529 | |
220 | K | A | -1.0243 | |
221 | G | A | 0.0000 | |
222 | P | A | 0.0000 | |
223 | L | A | 0.6750 | |
224 | N | A | 0.0593 | |
225 | N | A | 0.5318 | |
226 | W | A | 1.8650 | |
227 | V | A | 2.3041 | |
228 | T | A | 0.7528 | |
229 | H | A | 0.8573 | |
230 | L | A | 1.9253 | |
231 | S | A | 0.7109 | |
232 | D | A | 0.0297 | |
233 | P | A | 0.3350 | |
234 | L | A | 0.8544 | |
235 | H | A | -0.9713 | |
236 | T | A | -0.6619 | |
237 | T | A | 0.0369 | |
238 | I | A | 0.9645 | |
239 | L | A | 1.6446 | |
240 | D | A | -0.4294 | |
241 | R | A | -0.6407 | |
242 | F | A | 1.9934 | |
243 | L | A | 1.9739 |