Chain sequence(s) |
A: MAYQQDPCANPTRQTGKTGGQTDQYGNPVHQTEALGAYGAGTGTGMHGGEHQQQPHQQPGVLHRSGSSSSEDDGQGGRRKKGMKEKIKERIPGMGRKDEQKQTSATSTPGQGQQQKGMMEKIKEKLPGAH
input PDB |
Selected Chain(s) | A |
Distance of aggregation | 10 Å |
FoldX usage | No |
pH calculations | No |
alphaCutter usage | No |
Dynamic mode | No |
Automated mutations | No |
Downloads | Download all the data |
Simulation log |
[INFO] Logger: Verbosity set to: 2 - [INFO] (00:00:00) [WARNING] runJob: Working directory already exists (possibly overwriting previous results -ow to prevent this behavior) (00:00:00) [INFO] runJob: Starting aggrescan3d job on: input.pdb with A chain(s) selected (00:00:00) [INFO] runJob: Creating pdb object from: input.pdb (00:00:00) [INFO] runJob: FoldX not utilized. Treating input pdb file as it was already optimized. (00:00:01) [INFO] Analysis: Starting Aggrescan4D on folded.pdb (00:00:01) [INFO] Main: Simulation completed successfully. (00:00:01) |
The table below lists A4D score for protein residues. Residues with A4D score > 0.0000 are marked by yellow rows.
residue index | residue name | chain | Aggrescan4D score | mutation |
---|---|---|---|---|
1 | M | A | 1.2588 | |
2 | A | A | 0.7393 | |
3 | Y | A | 0.4417 | |
4 | Q | A | -1.4508 | |
5 | Q | A | -2.2676 | |
6 | D | A | -2.4103 | |
7 | P | A | -1.3976 | |
8 | C | A | -0.3689 | |
9 | A | A | -0.6366 | |
10 | N | A | -1.4646 | |
11 | P | A | -1.4839 | |
12 | T | A | -1.7856 | |
13 | R | A | -2.8090 | |
14 | Q | A | -2.6092 | |
15 | T | A | -1.9168 | |
16 | G | A | -2.0762 | |
17 | K | A | -2.3927 | |
18 | T | A | -1.5817 | |
19 | G | A | -1.7476 | |
20 | G | A | -1.9944 | |
21 | Q | A | -2.2297 | |
22 | T | A | -1.7376 | |
23 | D | A | -1.5987 | |
24 | Q | A | -1.4778 | |
25 | Y | A | -0.1513 | |
26 | G | A | -1.2195 | |
27 | N | A | -1.7907 | |
28 | P | A | -1.4984 | |
29 | V | A | -0.8479 | |
30 | H | A | -1.7599 | |
31 | Q | A | -2.1782 | |
32 | T | A | -1.4189 | |
33 | E | A | -1.9706 | |
34 | A | A | -0.3524 | |
35 | L | A | 0.9143 | |
36 | G | A | 0.3845 | |
37 | A | A | 0.7210 | |
38 | Y | A | 1.0232 | |
39 | G | A | 0.0536 | |
40 | A | A | -0.2003 | |
41 | G | A | -0.7316 | |
42 | T | A | -0.6394 | |
43 | G | A | -0.6585 | |
44 | T | A | -0.5001 | |
45 | G | A | -0.3848 | |
46 | M | A | 0.0463 | |
47 | H | A | -1.1722 | |
48 | G | A | -1.6200 | |
49 | G | A | -1.8520 | |
50 | E | A | -3.0268 | |
51 | H | A | -3.1697 | |
52 | Q | A | -2.9899 | |
53 | Q | A | -2.7718 | |
54 | Q | A | -2.7255 | |
55 | P | A | -2.2861 | |
56 | H | A | -2.4080 | |
57 | Q | A | -2.5908 | |
58 | Q | A | -2.0392 | |
59 | P | A | -0.8857 | |
60 | G | A | 0.1638 | |
61 | V | A | 1.5391 | |
62 | L | A | 1.1999 | |
63 | H | A | -0.8077 | |
64 | R | A | -1.8429 | |
65 | S | A | -1.5008 | |
66 | G | A | -1.2911 | |
67 | S | A | -0.8743 | |
68 | S | A | -0.8614 | |
69 | S | A | -1.1961 | |
70 | S | A | -2.1160 | |
71 | E | A | -3.4438 | |
72 | D | A | -4.1067 | |
73 | D | A | -3.8135 | |
74 | G | A | -2.7804 | |
75 | Q | A | -3.1531 | |
76 | G | A | -3.4816 | |
77 | G | A | -2.9687 | |
78 | R | A | -3.7114 | |
79 | R | A | -4.3521 | |
80 | K | A | -3.9542 | |
81 | K | A | -3.5872 | |
82 | G | A | -2.2928 | |
83 | M | A | -1.0013 | |
84 | K | A | -2.3529 | |
85 | E | A | -2.9803 | |
86 | K | A | -2.5498 | |
87 | I | A | -0.6475 | |
88 | K | A | -1.9821 | |
89 | E | A | -2.8512 | |
90 | R | A | -2.3023 | |
91 | I | A | -0.2935 | |
92 | P | A | -0.5420 | |
93 | G | A | -1.1300 | |
94 | M | A | -0.7581 | |
95 | G | A | -2.1859 | |
96 | R | A | -3.7001 | |
97 | K | A | -4.5428 | |
98 | D | A | -4.6785 | |
99 | E | A | -4.6720 | |
100 | Q | A | -4.4131 | |
101 | K | A | -3.9590 | |
102 | Q | A | -2.9609 | |
103 | T | A | -1.6441 | |
104 | S | A | -1.1820 | |
105 | A | A | -0.5344 | |
106 | T | A | -0.3742 | |
107 | S | A | -0.8332 | |
108 | T | A | -0.7555 | |
109 | P | A | -0.9759 | |
110 | G | A | -1.7255 | |
111 | Q | A | -2.5500 | |
112 | G | A | -2.5991 | |
113 | Q | A | -3.0844 | |
114 | Q | A | -3.1159 | |
115 | Q | A | -3.1123 | |
116 | K | A | -3.1289 | |
117 | G | A | -2.1567 | |
118 | M | A | -0.9455 | |
119 | M | A | -1.1816 | |
120 | E | A | -3.2367 | |
121 | K | A | -2.6887 | |
122 | I | A | -0.5324 | |
123 | K | A | -2.5807 | |
124 | E | A | -3.4570 | |
125 | K | A | -2.3553 | |
126 | L | A | -0.4434 | |
127 | P | A | -0.8720 | |
128 | G | A | -1.0811 | |
129 | A | A | -1.1531 | |
130 | H | A | -1.3838 |