Chain sequence(s) |
A: MAGLINKIGDALHIGGGNKEGEHKKEEEHKKHVDEHKSGEHKEGIVDKIKDKIHGGEGKSHDGEGKSHDGEKKKKKDKKEKKHHDDGHHSSSSDSDSD
input PDB |
Selected Chain(s) | A |
Distance of aggregation | 10 Å |
FoldX usage | No |
pH calculations | No |
alphaCutter usage | No |
Dynamic mode | No |
Automated mutations | No |
Downloads | Download all the data |
Simulation log |
[INFO] Logger: Verbosity set to: 2 - [INFO] (00:00:00) [WARNING] runJob: Working directory already exists (possibly overwriting previous results -ow to prevent this behavior) (00:00:00) [INFO] runJob: Starting aggrescan3d job on: input.pdb with A chain(s) selected (00:00:00) [INFO] runJob: Creating pdb object from: input.pdb (00:00:00) [INFO] runJob: FoldX not utilized. Treating input pdb file as it was already optimized. (00:00:01) [INFO] Analysis: Starting Aggrescan4D on folded.pdb (00:00:01) [INFO] Main: Simulation completed successfully. (00:00:01) |
The table below lists A4D score for protein residues. Residues with A4D score > 0.0000 are marked by yellow rows.
residue index | residue name | chain | Aggrescan4D score | mutation |
---|---|---|---|---|
1 | M | A | 1.4769 | |
2 | A | A | 0.8337 | |
3 | G | A | 0.6926 | |
4 | L | A | 1.9970 | |
5 | I | A | 1.9704 | |
6 | N | A | -0.4334 | |
7 | K | A | -0.8485 | |
8 | I | A | 1.6813 | |
9 | G | A | 0.4330 | |
10 | D | A | -1.4109 | |
11 | A | A | -0.0348 | |
12 | L | A | 1.2828 | |
13 | H | A | -0.1939 | |
14 | I | A | 1.4089 | |
15 | G | A | -0.4366 | |
16 | G | A | -1.2355 | |
17 | G | A | -1.8677 | |
18 | N | A | -3.0758 | |
19 | K | A | -3.7712 | |
20 | E | A | -3.8663 | |
21 | G | A | -3.4381 | |
22 | E | A | -4.0476 | |
23 | H | A | -3.8942 | |
24 | K | A | -4.4738 | |
25 | K | A | -4.8028 | |
26 | E | A | -4.7827 | |
27 | E | A | -4.7873 | |
28 | E | A | -4.5373 | |
29 | H | A | -3.8706 | |
30 | K | A | -3.7461 | |
31 | K | A | -3.2303 | |
32 | H | A | -2.2565 | |
33 | V | A | -0.8911 | |
34 | D | A | -2.8118 | |
35 | E | A | -3.3469 | |
36 | H | A | -3.3551 | |
37 | K | A | -3.8403 | |
38 | S | A | -2.8690 | |
39 | G | A | -3.0032 | |
40 | E | A | -3.9082 | |
41 | H | A | -3.1993 | |
42 | K | A | -3.1245 | |
43 | E | A | -3.2066 | |
44 | G | A | -2.0347 | |
45 | I | A | -0.5857 | |
46 | V | A | -0.4632 | |
47 | D | A | -2.6615 | |
48 | K | A | -2.3414 | |
49 | I | A | -0.3697 | |
50 | K | A | -2.4639 | |
51 | D | A | -3.4988 | |
52 | K | A | -2.5370 | |
53 | I | A | -0.6023 | |
54 | H | A | -2.1716 | |
55 | G | A | -2.8493 | |
56 | G | A | -2.1389 | |
57 | E | A | -2.9574 | |
58 | G | A | -2.6770 | |
59 | K | A | -2.9080 | |
60 | S | A | -2.3305 | |
61 | H | A | -2.8731 | |
62 | D | A | -3.3050 | |
63 | G | A | -2.9298 | |
64 | E | A | -3.3452 | |
65 | G | A | -2.8254 | |
66 | K | A | -3.1513 | |
67 | S | A | -2.5841 | |
68 | H | A | -2.9012 | |
69 | D | A | -3.4503 | |
70 | G | A | -3.2960 | |
71 | E | A | -4.1119 | |
72 | K | A | -4.4911 | |
73 | K | A | -4.4908 | |
74 | K | A | -4.8549 | |
75 | K | A | -4.7517 | |
76 | K | A | -4.8492 | |
77 | D | A | -4.9728 | |
78 | K | A | -4.9471 | |
79 | K | A | -4.9021 | |
80 | E | A | -4.8021 | |
81 | K | A | -4.5605 | |
82 | K | A | -4.1983 | |
83 | H | A | -3.7013 | |
84 | H | A | -3.5249 | |
85 | D | A | -3.9927 | |
86 | D | A | -3.7105 | |
87 | G | A | -2.9380 | |
88 | H | A | -2.6148 | |
89 | H | A | -2.0823 | |
90 | S | A | -1.2977 | |
91 | S | A | -1.2136 | |
92 | S | A | -1.2426 | |
93 | S | A | -1.6340 | |
94 | D | A | -2.6854 | |
95 | S | A | -2.3332 | |
96 | D | A | -3.0186 | |
97 | S | A | -2.2541 | |
98 | D | A | -2.3460 |