Chain sequence(s) |
A: MQEQATSSLAASSLPSSSERSSSSAPHLEIKEGIESDEEIRRVPEFGGEAVGKETSGRESGSATGQERTQATVGESQRKRGRTPAEKENKRLKRLLRNRVSAQQARERKKAYLSELENRVKDLENKNSELEERLSTLQNENQMLRHILKNTTGNKRGGGGGSNADASL
input PDB |
Selected Chain(s) | A |
Distance of aggregation | 10 Å |
FoldX usage | No |
pH calculations | No |
alphaCutter usage | No |
Dynamic mode | No |
Automated mutations | No |
Downloads | Download all the data |
Simulation log |
[INFO] Logger: Verbosity set to: 2 - [INFO] (00:00:01) [WARNING] runJob: Working directory already exists (possibly overwriting previous results -ow to prevent this behavior) (00:00:01) [INFO] runJob: Starting aggrescan3d job on: input.pdb with A chain(s) selected (00:00:01) [INFO] runJob: Creating pdb object from: input.pdb (00:00:01) [INFO] runJob: FoldX not utilized. Treating input pdb file as it was already optimized. (00:00:01) [INFO] Analysis: Starting Aggrescan4D on folded.pdb (00:00:01) [INFO] Main: Simulation completed successfully. (00:00:02) |
The table below lists A4D score for protein residues. Residues with A4D score > 0.0000 are marked by yellow rows.
residue index | residue name | chain | Aggrescan4D score | mutation |
---|---|---|---|---|
1 | M | A | 0.0246 | |
2 | Q | A | -1.8437 | |
3 | E | A | -2.7192 | |
4 | Q | A | -2.3832 | |
5 | A | A | -1.2103 | |
6 | T | A | -0.5280 | |
7 | S | A | -0.1162 | |
8 | S | A | 0.5595 | |
9 | L | A | 1.3910 | |
10 | A | A | 0.6831 | |
11 | A | A | 0.4484 | |
12 | S | A | 0.2543 | |
13 | S | A | 0.3731 | |
14 | L | A | 1.2381 | |
15 | P | A | 0.2832 | |
16 | S | A | -0.2138 | |
17 | S | A | -1.0975 | |
18 | S | A | -1.6296 | |
19 | E | A | -2.9683 | |
20 | R | A | -2.9965 | |
21 | S | A | -1.7582 | |
22 | S | A | -1.0537 | |
23 | S | A | -0.6632 | |
24 | S | A | -0.5224 | |
25 | A | A | -0.2649 | |
26 | P | A | -0.5796 | |
27 | H | A | -0.6041 | |
28 | L | A | 0.4787 | |
29 | E | A | -1.1765 | |
30 | I | A | 0.0720 | |
31 | K | A | -1.8557 | |
32 | E | A | -2.3524 | |
33 | G | A | -1.1654 | |
34 | I | A | -0.0868 | |
35 | E | A | -2.1333 | |
36 | S | A | -2.1393 | |
37 | D | A | -3.4569 | |
38 | E | A | -4.2660 | |
39 | E | A | -3.5207 | |
40 | I | A | -1.2953 | |
41 | R | A | -2.8664 | |
42 | R | A | -2.7393 | |
43 | V | A | 0.1383 | |
44 | P | A | -0.2826 | |
45 | E | A | -0.9798 | |
46 | F | A | 0.6937 | |
47 | G | A | -0.6501 | |
48 | G | A | -1.2230 | |
49 | E | A | -1.6005 | |
50 | A | A | -0.2161 | |
51 | V | A | 0.7432 | |
52 | G | A | -1.0352 | |
53 | K | A | -2.4889 | |
54 | E | A | -2.9182 | |
55 | T | A | -1.7290 | |
56 | S | A | -1.3393 | |
57 | G | A | -2.1854 | |
58 | R | A | -3.1228 | |
59 | E | A | -3.0312 | |
60 | S | A | -1.7676 | |
61 | G | A | -1.2500 | |
62 | S | A | -0.4704 | |
63 | A | A | -0.2742 | |
64 | T | A | -0.6112 | |
65 | G | A | -1.5573 | |
66 | Q | A | -2.7597 | |
67 | E | A | -3.5847 | |
68 | R | A | -3.3593 | |
69 | T | A | -1.9764 | |
70 | Q | A | -1.6960 | |
71 | A | A | -0.4254 | |
72 | T | A | 0.2642 | |
73 | V | A | 0.9454 | |
74 | G | A | -0.9163 | |
75 | E | A | -2.7295 | |
76 | S | A | -2.1693 | |
77 | Q | A | -3.3817 | |
78 | R | A | -4.1904 | |
79 | K | A | -4.4415 | |
80 | R | A | -3.9003 | |
81 | G | A | -3.2285 | |
82 | R | A | -3.7181 | |
83 | T | A | -2.3937 | |
84 | P | A | -2.1723 | |
85 | A | A | -2.6247 | |
86 | E | A | -3.7802 | |
87 | K | A | -4.7437 | |
88 | E | A | -4.8779 | |
89 | N | A | -4.2006 | |
90 | K | A | -4.8365 | |
91 | R | A | -4.0707 | |
92 | L | A | -1.9869 | |
93 | K | A | -3.4212 | |
94 | R | A | -3.5118 | |
95 | L | A | -0.9515 | |
96 | L | A | -0.3547 | |
97 | R | A | -2.3113 | |
98 | N | A | -2.4684 | |
99 | R | A | -2.2345 | |
100 | V | A | -0.7171 | |
101 | S | A | -1.6988 | |
102 | A | A | -2.4224 | |
103 | Q | A | -3.4944 | |
104 | Q | A | -3.7066 | |
105 | A | A | -3.5605 | |
106 | R | A | -4.7605 | |
107 | E | A | -5.1208 | |
108 | R | A | -4.5824 | |
109 | K | A | -4.3551 | |
110 | K | A | -3.8052 | |
111 | A | A | -2.3577 | |
112 | Y | A | -1.0293 | |
113 | L | A | -0.9961 | |
114 | S | A | -1.7977 | |
115 | E | A | -2.5614 | |
116 | L | A | -1.4590 | |
117 | E | A | -2.9966 | |
118 | N | A | -3.8043 | |
119 | R | A | -3.7011 | |
120 | V | A | -2.5334 | |
121 | K | A | -4.4587 | |
122 | D | A | -4.3081 | |
123 | L | A | -2.5381 | |
124 | E | A | -3.9929 | |
125 | N | A | -4.3200 | |
126 | K | A | -4.0374 | |
127 | N | A | -4.0086 | |
128 | S | A | -3.3006 | |
129 | E | A | -3.3323 | |
130 | L | A | -2.0069 | |
131 | E | A | -2.9844 | |
132 | E | A | -3.3362 | |
133 | R | A | -2.3863 | |
134 | L | A | -0.5206 | |
135 | S | A | -1.5834 | |
136 | T | A | -1.5046 | |
137 | L | A | -0.7230 | |
138 | Q | A | -1.9798 | |
139 | N | A | -2.4885 | |
140 | E | A | -2.1301 | |
141 | N | A | -2.3809 | |
142 | Q | A | -2.3846 | |
143 | M | A | -0.7821 | |
144 | L | A | -0.2319 | |
145 | R | A | -2.0478 | |
146 | H | A | -1.4739 | |
147 | I | A | 0.5254 | |
148 | L | A | 0.2117 | |
149 | K | A | -1.9362 | |
150 | N | A | -1.9549 | |
151 | T | A | -1.6589 | |
152 | T | A | -2.0676 | |
153 | G | A | -2.7646 | |
154 | N | A | -3.4106 | |
155 | K | A | -3.8357 | |
156 | R | A | -3.6900 | |
157 | G | A | -2.7293 | |
158 | G | A | -2.3456 | |
159 | G | A | -1.8599 | |
160 | G | A | -1.5410 | |
161 | G | A | -1.2707 | |
162 | S | A | -1.4508 | |
163 | N | A | -1.9382 | |
164 | A | A | -1.6079 | |
165 | D | A | -1.9469 | |
166 | A | A | -0.6968 | |
167 | S | A | 0.0589 | |
168 | L | A | 1.2551 |