Project name: IN011-MEDI8852-IgM5

Status: done

Started: 2026-07-13 05:12:27
Chain sequence(s) A: DIQMTQSPSSLSASVGDRVTITCRTSQSLSSYTHWYQQKPGKAPKLLIYAASSRGSGVPSRFSGSGSGTDFTLTISSLQPEDFATYYCQQSRTFGQGTKVEIKRTVAAPSVFIFPPSDEQLKSGTASVVCLLNNFYPREAKVQWKVDNALQSGNSQESVTEQDSKDSTYSLSSTLTLSKADYEKHKVYACEVTHQGLSSPVTKSFNRGEC
C: QVQLQQSGPGLVKPSQTLSLTCAISGDSVSSYNAVWNWIRQSPSRGLEWLGRTYYRSGWYNDYAESVKSRITINPDTSKNQFSLQLNSVTPEDTAVYYCARSGHITVFGVNVDAFDMWGQGTMVTVSSASTKGPSVFPLAPSSKSTSGGTAALGCLVKDYFPEPVTVSWNSGALTSGVHTFPAVLQSSGLYSLSSVVTVPSSSLGTQTYICNVNHKPSNTKVDKKVEPKSCDKTHTCPPCPAPELLGGPSVFLFPPKPKDTLMISRTPEVTCVVVDVSHEDPEVKFNWYVDGVEVHNAKTKPREEQYNSTYRVVSVLTVLHQDWLNGKEYKCKVSNKALPAPIEKTISKAKGQPREPQVYTLPPSRDELTKNQVSLTCLVKGFYPSDIAVEWESNGQPENNYKTTPPVLDSDGSFFLYSKLTVDKSRWQQGNVFSCSVMHEALHNHYTQKSLSLSPGK
B: DIQMTQSPSSLSASVGDRVTITCRTSQSLSSYTHWYQQKPGKAPKLLIYAASSRGSGVPSRFSGSGSGTDFTLTISSLQPEDFATYYCQQSRTFGQGTKVEIKRTVAAPSVFIFPPSDEQLKSGTASVVCLLNNFYPREAKVQWKVDNALQSGNSQESVTEQDSKDSTYSLSSTLTLSKADYEKHKVYACEVTHQGLSSPVTKSFNRGEC
D: QVQLQQSGPGLVKPSQTLSLTCAISGDSVSSYNAVWNWIRQSPSRGLEWLGRTYYRSGWYNDYAESVKSRITINPDTSKNQFSLQLNSVTPEDTAVYYCARSGHITVFGVNVDAFDMWGQGTMVTVSSASTKGPSVFPLAPSSKSTSGGTAALGCLVKDYFPEPVTVSWNSGALTSGVHTFPAVLQSSGLYSLSSVVTVPSSSLGTQTYICNVNHKPSNTKVDKKVEPKSCDKTHTCPPCPAPELLGGPSVFLFPPKPKDTLMISRTPEVTCVVVDVSHEDPEVKFNWYVDGVEVHNAKTKPREEQYNSTYRVVSVLTVLHQDWLNGKEYKCKVSNKALPAPIEKTISKAKGQPREPQVYTLPPSRDELTKNQVSLTCLVKGFYPSDIAVEWESNGQPENNYKTTPPVLDSDGSFFLYSKLTVDKSRWQQGNVFSCSVMHEALHNHYTQKSLSLSPGK
input PDB
Selected Chain(s) A,C,B,D
Distance of aggregation 10 Å
FoldX usage Yes
pH calculations Yes
alphaCutter usage No
Dynamic mode No
Automated mutations No
Downloads Download all the data
Simulation log
[INFO]       Logger:   Verbosity set to: 2 - [INFO]                                                (00:00:00)
[WARNING]    runJob:   Working directory already exists (possibly overwriting previous results -ow 
                       to prevent this behavior)                                                   (00:00:00)
[INFO]       runJob:   Starting aggrescan3d job on: input.pdb with all chain(s) selected           (00:00:00)
[INFO]       runJob:   Creating pdb object from: input.pdb                                         (00:00:00)
[INFO]       PDB-Info: The input structure is globular. Max score is recommended for pH analysis.  (00:00:04)
[INFO]       FoldX:    Starting FoldX energy minimization                                          (00:00:04)
[INFO]       Analysis: Starting Aggrescan4D on folded.pdb                                          (00:15:54)
[INFO]       agg3D:    Running pKa-ANI on                                                          
                       /STORAGE/DATA/lcbio/aggreskan/65294b27571d35c/tmp/folded.pdb                (00:15:54)
[INFO]       Main:     Simulation completed successfully.                                          (00:21:56)
Show buried residues

Minimal score value
-3.4973
Maximal score value
2.2813
Average score
-0.6708
Total score value
-896.1851

The table below lists A4D score for protein residues. Residues with A4D score > 0.0000 are marked by yellow rows.

residue index residue name chain Aggrescan4D score mutation
1 D A -2.3658
2 I A -1.7877
3 Q A -2.2056
4 M A 0.0000
5 T A -1.3597
6 Q A 0.0000
7 S A -0.6993
8 P A 0.0000
9 S A -1.0851
10 S A -0.9321
11 L A -0.5612
12 S A -0.5524
13 A A -0.6473
14 S A -0.5456
15 V A 0.1039
16 G A -0.4265
17 D A -1.3308
18 R A -2.0257
19 V A 0.0000
20 T A -0.7433
21 I A 0.0000
22 T A -0.8408
23 C A 0.0000
24 R A -2.6830
25 T A 0.0000
26 S A -1.8728
27 Q A -2.0447
28 S A -1.1043
29 L A -0.1807
30 S A -0.4697
31 S A -0.1173
32 Y A 0.3015
33 T A 0.0000
34 H A 0.0000
35 W A 0.0000
36 Y A 0.0000
37 Q A 0.0000
38 Q A 0.0000
39 K A -1.8227
40 P A -1.3898
41 G A -1.5616
42 K A -2.5323
43 A A -1.6282
44 P A 0.0000
45 K A -1.5175
46 L A 0.0000
47 L A 0.0000
48 I A 0.0000
49 Y A -0.0578
50 A A -0.0644
51 A A 0.0000
52 S A -0.5724
53 S A -0.5877
54 R A -1.0823
55 G A -0.8256
56 S A -0.8015
57 G A -0.6937
58 V A -0.6692
59 P A -0.5683
60 S A -0.6249
61 R A -0.7521
62 F A 0.0000
63 S A -0.5519
64 G A 0.0000
65 S A -0.6489
66 G A -1.0882
67 S A -0.9657
68 G A -1.0621
69 T A -1.6058
70 D A -2.0071
71 F A 0.0000
72 T A 0.0000
73 L A 0.0000
74 T A -0.5748
75 I A 0.0000
76 S A -1.1966
77 S A -0.8769
78 L A 0.0000
79 Q A -0.7205
80 P A -1.0841
81 E A -1.9667
82 D A 0.0000
83 F A 0.0000
84 A A 0.0000
85 T A -0.8532
86 Y A 0.0000
87 Y A 0.0000
88 C A 0.0000
89 Q A 0.0000
90 Q A 0.0000
91 S A -0.8163
92 R A -1.7169
93 T A -1.3252
94 F A -0.6701
95 G A 0.0000
96 Q A -1.8117
97 G A 0.0000
98 T A 0.0000
99 K A -1.4616
100 V A 0.0000
101 E A -0.8939
102 I A 0.0000
103 K A -0.9850
104 R A -0.6350
105 T A -0.0964
106 V A -0.1377
107 A A -0.1598
108 A A -0.1265
109 P A 0.0000
110 S A -0.0990
111 V A 0.0000
112 F A 0.0000
113 I A 0.0000
114 F A 0.0000
115 P A -0.6008
116 P A 0.0000
117 S A -1.6767
118 D A -2.9140
119 E A -2.5882
120 Q A 0.0000
121 L A -2.1853
122 K A -2.7281
123 S A -1.6787
124 G A -1.2101
125 T A -0.9391
126 A A 0.0000
127 S A 0.0000
128 V A 0.0000
129 V A 0.0000
130 C A 0.0000
131 L A 0.0000
132 L A 0.0000
133 N A 0.0000
134 N A -0.3849
135 F A 0.0000
136 Y A 0.0000
137 P A -1.6324
138 R A -2.8057
139 E A -3.1367
140 A A -2.2284
141 K A -2.4502
142 V A -0.8405
143 Q A -0.5771
144 W A 0.0000
145 K A 0.0000
146 V A 0.0000
147 D A -1.1579
148 N A 0.0000
149 A A -0.2456
150 L A -0.2197
151 Q A -0.6720
152 S A -0.8854
153 G A -1.2251
154 N A -1.4927
155 S A -1.3120
156 Q A -1.2462
157 E A -1.5580
158 S A -0.7486
159 V A -0.6441
160 T A -0.8908
161 E A -1.7991
162 Q A 0.0000
163 D A 0.0000
164 S A -1.1629
165 K A -1.2720
166 D A -0.5001
167 S A 0.0000
168 T A 0.0000
169 Y A 0.0000
170 S A 0.0000
171 L A 0.0000
172 S A 0.0000
173 S A 0.0000
174 T A -0.6235
175 L A 0.0000
176 T A -0.5845
177 L A -0.7241
178 S A -0.9488
179 K A -2.0214
180 A A -1.7550
181 D A -2.2071
182 Y A 0.0000
183 E A -3.4896
184 K A -3.4973
185 H A -2.9069
186 K A -3.1789
187 V A 0.0000
188 Y A 0.0000
189 A A 0.0000
190 C A 0.0000
191 E A 0.0000
192 V A 0.0000
193 T A -0.9955
194 H A 0.0000
195 Q A -1.7788
196 G A 0.0000
197 L A -0.1232
198 S A -0.1404
199 S A 0.1015
200 P A -0.2056
201 V A 0.3161
202 T A 0.1099
203 K A -0.5747
204 S A 0.0000
205 F A 0.0000
206 N A -1.6396
207 R A -2.3584
208 G A -1.8390
209 E A -1.9641
210 C A -0.8878
1 D B -2.3079
2 I B -1.7152
3 Q B -2.2052
4 M B 0.0000
5 T B -1.3614
6 Q B 0.0000
7 S B -0.7093
8 P B -0.6788
9 S B -1.0098
10 S B -0.8885
11 L B -0.6099
12 S B -0.7673
13 A B -0.8261
14 S B -0.7834
15 V B -0.1184
16 G B -0.4971
17 D B -1.4039
18 R B -2.0210
19 V B 0.0000
20 T B -0.5703
21 I B 0.0000
22 T B -0.7801
23 C B 0.0000
24 R B -2.6898
25 T B 0.0000
26 S B -1.8798
27 Q B -2.0435
28 S B -1.0984
29 L B -0.1731
30 S B -0.4678
31 S B -0.1206
32 Y B 0.2923
33 T B 0.0000
34 H B 0.0000
35 W B 0.0000
36 Y B 0.0000
37 Q B 0.0000
38 Q B 0.0000
39 K B -1.6677
40 P B -1.2987
41 G B -1.6715
42 K B -2.5507
43 A B -1.6475
44 P B 0.0000
45 K B -1.6546
46 L B 0.0000
47 L B 0.0000
48 I B 0.0000
49 Y B -0.0395
50 A B 0.0000
51 A B 0.0000
52 S B -0.5453
53 S B -0.5402
54 R B -1.0239
55 G B -0.8438
56 S B -0.8402
57 G B -0.7471
58 V B 0.0000
59 P B -0.5743
60 S B -0.6235
61 R B -0.7646
62 F B 0.0000
63 S B -0.5408
64 G B 0.0000
65 S B -0.6497
66 G B -1.0915
67 S B -0.9622
68 G B -1.0562
69 T B -1.5972
70 D B -1.9854
71 F B 0.0000
72 T B -0.6879
73 L B 0.0000
74 T B -0.5720
75 I B 0.0000
76 S B -1.1761
77 S B -0.9148
78 L B 0.0000
79 Q B -0.5383
80 P B -0.7678
81 E B -1.2596
82 D B 0.0000
83 F B -0.8276
84 A B 0.0000
85 T B -0.7854
86 Y B 0.0000
87 Y B 0.0000
88 C B 0.0000
89 Q B 0.0000
90 Q B 0.0000
91 S B -0.6376
92 R B -1.3499
93 T B -1.1496
94 F B -0.5961
95 G B 0.0000
96 Q B -1.8040
97 G B 0.0000
98 T B 0.0000
99 K B -1.3849
100 V B 0.0000
101 E B -0.8976
102 I B 0.0000
103 K B -1.3458
104 R B -0.6825
105 T B -0.0819
106 V B 0.0212
107 A B -0.0081
108 A B -0.0643
109 P B 0.0000
110 S B -0.0795
111 V B 0.0000
112 F B 0.0000
113 I B 0.0000
114 F B 0.0000
115 P B -0.6128
116 P B 0.0000
117 S B -1.6036
118 D B -2.7735
119 E B -2.5166
120 Q B 0.0000
121 L B -2.1354
122 K B -2.7130
123 S B -1.6891
124 G B -1.2698
125 T B -0.9777
126 A B 0.0000
127 S B 0.0000
128 V B 0.0000
129 V B 0.0000
130 C B 0.0000
131 L B 0.0000
132 L B 0.0000
133 N B 0.0000
134 N B -0.2433
135 F B 0.0000
136 Y B 0.0000
137 P B -1.3960
138 R B -2.2358
139 E B -2.8917
140 A B -2.1037
141 K B -2.4356
142 V B -0.9107
143 Q B -0.6405
144 W B 0.0000
145 K B 0.0000
146 V B 0.0000
147 D B -1.0316
148 N B -0.5135
149 A B -0.2130
150 L B -0.2025
151 Q B -0.4741
152 S B -0.6377
153 G B -0.8580
154 N B -0.7397
155 S B -0.9419
156 Q B -1.0753
157 E B -1.5552
158 S B -0.7031
159 V B -0.4740
160 T B 0.0000
161 E B -1.3597
162 Q B 0.0000
163 D B 0.0000
164 S B -0.8284
165 K B -0.8958
166 D B 0.0000
167 S B 0.0000
168 T B 0.0000
169 Y B 0.0000
170 S B 0.0000
171 L B 0.0000
172 S B 0.0000
173 S B 0.0000
174 T B -0.5071
175 L B 0.0000
176 T B -0.3745
177 L B -0.5576
178 S B -0.9473
179 K B -2.0100
180 A B -1.6989
181 D B -2.1482
182 Y B 0.0000
183 E B -3.0949
184 K B -3.2434
185 H B -2.4655
186 K B -2.3452
187 V B -0.9429
188 Y B 0.0000
189 A B 0.0000
190 C B 0.0000
191 E B 0.0000
192 V B 0.0000
193 T B -1.0259
194 H B 0.0000
195 Q B -1.7139
196 G B 0.0000
197 L B -0.1077
198 S B -0.2261
199 S B 0.0303
200 P B -0.2052
201 V B 0.3411
202 T B 0.1335
203 K B -0.4780
204 S B -0.3309
205 F B 0.0000
206 N B -1.3414
207 R B -1.9405
208 G B -1.7147
209 E B -1.8660
210 C B -0.9605
1 Q C -1.5319
2 V C -1.1435
3 Q C -1.5752
4 L C 0.0000
5 Q C -1.6980
6 Q C 0.0000
7 S C -0.8864
8 G C -0.5846
9 P C -0.3217
10 G C -0.3091
11 L C -0.1967
12 V C 0.0000
13 K C -1.5977
14 P C -1.4219
15 S C -1.2841
16 Q C -1.6911
17 T C -1.3605
18 L C 0.0000
19 S C -0.7876
20 L C 0.0000
21 T C -0.7582
22 C C 0.0000
23 A C -1.1070
24 I C 0.0000
25 S C -1.2229
26 G C -1.2578
27 D C -1.1045
28 S C -0.6235
29 V C 0.0000
30 S C -0.0028
31 S C 0.0655
32 Y C 0.6029
33 N C -0.9126
34 A C 0.0000
35 V C 0.0000
36 W C 0.0000
37 N C 0.0000
38 W C 0.0000
39 I C 0.0000
40 R C 0.0000
41 Q C -0.6162
42 S C -1.0884
43 P C -0.9389
44 S C -1.5113
45 R C -2.5701
46 G C -1.5812
47 L C 0.0000
48 E C -1.1667
49 W C 0.0000
50 L C 0.0000
51 G C 0.0000
52 R C -0.5841
53 T C 0.0000
54 Y C 0.3156
55 Y C 0.6733
56 R C 0.1443
57 S C 0.0257
58 G C 0.2190
59 W C 0.5379
60 Y C 0.4805
61 N C -0.6347
62 D C -1.3345
63 Y C -1.6039
64 A C -1.7816
65 E C -2.5824
66 S C -1.5897
67 V C 0.0000
68 K C -2.5125
69 S C -1.5779
70 R C -1.6326
71 I C 0.0000
72 T C -1.2664
73 I C 0.0000
74 N C -1.4993
75 P C -1.1913
76 D C -1.5308
77 T C -1.2510
78 S C -1.3291
79 K C -2.1766
80 N C -1.6104
81 Q C -1.4600
82 F C 0.0000
83 S C -0.8495
84 L C 0.0000
85 Q C -1.2162
86 L C 0.0000
87 N C -1.5823
88 S C -1.3246
89 V C 0.0000
90 T C -1.3135
91 P C -1.3814
92 E C -2.1921
93 D C 0.0000
94 T C -0.5926
95 A C 0.0000
96 V C 0.2579
97 Y C 0.0000
98 Y C 0.0000
99 C C 0.0000
100 A C 0.0000
101 R C 0.0000
102 S C 0.0000
103 G C 0.0000
104 H C -0.6575
105 I C -0.1698
106 T C 0.6133
107 V C 1.5238
108 F C 2.2813
109 G C 1.2750
110 V C 1.8801
111 N C 0.1225
112 V C 0.0000
113 D C -0.4330
114 A C 0.0000
115 F C 0.0000
116 D C -0.5840
117 M C -0.5452
118 W C 0.0000
119 G C 0.0000
120 Q C -1.9227
121 G C -0.9993
122 T C -0.2107
123 M C 0.3834
124 V C 0.0000
125 T C -0.3442
126 V C 0.0000
127 S C -0.6107
128 S C -0.6984
129 A C -0.4723
130 S C -0.5688
131 T C -0.7540
132 K C -1.1649
133 G C -1.2910
134 P C 0.0000
135 S C -0.2267
136 V C 0.0000
137 F C 0.0000
138 P C -1.0899
139 L C 0.0000
140 A C -1.2436
141 P C 0.0000
142 S C -0.6885
143 S C -0.5318
144 K C -0.5495
145 S C 0.0000
146 T C -0.2365
147 S C -0.0930
148 G C -0.1100
149 G C -0.3790
150 T C -0.1139
151 A C 0.0000
152 A C 0.0000
153 L C 0.0000
154 G C 0.0000
155 C C 0.0000
156 L C 0.0000
157 V C 0.0000
158 K C 0.0000
159 D C -0.3287
160 Y C 0.0000
161 F C 0.0000
162 P C 0.0000
163 E C -0.3967
164 P C -0.5632
165 V C -0.6546
166 T C -0.5662
167 V C -0.3392
168 S C -0.3542
169 W C 0.0000
170 N C -0.6863
171 S C -0.5732
172 G C -0.3235
173 A C -0.1290
174 L C -0.0391
175 T C -0.2298
176 S C -0.3271
177 G C 0.0000
178 V C 0.3735
179 H C 0.0000
180 T C 0.0404
181 F C 0.0000
182 P C -0.2452
183 A C 0.2298
184 V C 0.5108
185 L C 1.1325
186 Q C 0.2803
187 S C -0.0721
188 S C -0.2080
189 G C 0.0348
190 L C 0.1296
191 Y C 0.4338
192 S C 0.0000
193 L C 0.0000
194 S C 0.0000
195 S C 0.0000
196 V C 0.0000
197 V C 0.0000
198 T C 0.0000
199 V C 0.0000
200 P C -0.6340
201 S C -0.3007
202 S C -0.4434
203 S C 0.0000
204 L C -0.6956
205 G C -0.9126
206 T C -0.6290
207 Q C -1.0367
208 T C -1.0513
209 Y C 0.0000
210 I C -1.2969
211 C C 0.0000
212 N C -1.4647
213 V C 0.0000
214 N C -1.8831
215 H C 0.0000
216 K C -2.7021
217 P C -1.5846
218 S C -1.8051
219 N C -2.5697
220 T C -2.0377
221 K C -2.6652
222 V C -1.6072
223 D C -2.5366
224 K C -2.1737
225 K C -2.5414
226 V C 0.0000
227 E C -2.8641
228 P C -1.7574
229 K C -2.4132
230 S C -1.6835
231 C C -1.3336
232 D C -2.6101
233 K C -2.7159
234 T C -1.8171
235 H C -1.6923
236 T C -1.1816
237 C C -0.6233
238 P C -0.3525
239 P C -0.2290
240 C C 0.0152
241 P C -0.6200
242 A C -0.4559
243 P C -0.7754
244 E C -1.5069
245 L C -0.1180
246 L C 0.4630
247 G C -0.3350
248 G C -0.4504
249 P C 0.0000
250 S C 0.2416
251 V C 0.0000
252 F C 0.8470
253 L C 0.7091
254 F C 0.5617
255 P C -0.2257
256 P C 0.0000
257 K C -1.2902
258 P C -1.0580
259 K C -0.8839
260 D C -0.8133
261 T C 0.0000
262 L C 0.0000
263 M C 0.4065
264 I C 1.4572
265 S C 0.4150
266 R C -0.3923
267 T C -0.3157
268 P C 0.0000
269 E C -1.0961
270 V C 0.0000
271 T C -0.1444
272 C C 0.0000
273 V C 0.0000
274 V C 0.0000
275 V C -0.4487
276 D C -0.6850
277 V C 0.0000
278 S C -2.0376
279 H C -2.5545
280 E C -3.0238
281 D C -2.7139
282 P C -2.6867
283 E C -3.1485
284 V C -2.0389
285 K C -2.2440
286 F C -1.2403
287 N C -0.9089
288 W C 0.0000
289 Y C -0.3912
290 V C -0.5905
291 D C -1.7537
292 G C -0.6642
293 V C 0.7447
294 E C -0.5426
295 V C -0.5318
296 H C -1.8702
297 N C -2.1692
298 A C -1.8756
299 K C -2.3704
300 T C -1.8321
301 K C -1.8566
302 P C -1.9216
303 R C -2.7762
304 E C -2.4678
305 E C -2.5940
306 Q C 0.0000
307 Y C -0.1714
308 N C 0.0000
309 S C -0.5115
310 T C 0.0000
311 Y C -1.8574
312 R C -1.5102
313 V C 0.0000
314 V C 0.0000
315 S C 0.0000
316 V C 0.0000
317 L C 0.0000
318 T C -0.7645
319 V C 0.0000
320 L C 0.3219
321 H C -0.2678
322 Q C -1.2959
323 D C -1.5393
324 W C 0.0000
325 L C -1.2429
326 N C -2.0923
327 G C -1.9697
328 K C -1.9762
329 E C -1.6175
330 Y C 0.0000
331 K C -0.6772
332 C C 0.0000
333 K C -0.6570
334 V C 0.0000
335 S C -1.3085
336 N C 0.0000
337 K C -2.6299
338 A C -1.6585
339 L C 0.0000
340 P C -0.8578
341 A C -0.4138
342 P C -0.6769
343 I C 0.0723
344 E C 0.0000
345 K C -0.0238
346 T C -0.3141
347 I C -0.0295
348 S C -1.0211
349 K C -1.2556
350 A C -1.2138
351 K C -2.3152
352 G C -1.9400
353 Q C -2.0834
354 P C -1.6720
355 R C -1.9037
356 E C -2.5495
357 P C 0.0000
358 Q C -1.2309
359 V C 0.0000
360 Y C 0.0000
361 T C -0.7765
362 L C 0.0000
363 P C -0.3921
364 P C -0.9380
365 S C -1.5595
366 R C -2.7724
367 D C -2.7931
368 E C 0.0000
369 L C -1.9376
370 T C -1.6218
371 K C -2.3503
372 N C -2.6427
373 Q C -2.6363
374 V C 0.0000
375 S C 0.0000
376 L C 0.0000
377 T C 0.0000
378 C C 0.0000
379 L C 0.0000
380 V C 0.0000
381 K C -0.4218
382 G C -0.9262
383 F C 0.0000
384 Y C -1.0007
385 P C 0.0000
386 S C -0.2844
387 D C -1.2279
388 I C -0.5661
389 A C -0.5119
390 V C 0.0000
391 E C -0.9920
392 W C 0.0000
393 E C -1.3221
394 S C 0.0000
395 N C -1.6779
396 G C -1.5310
397 Q C -1.7670
398 P C -1.5130
399 E C -1.0699
400 N C -0.7734
401 N C -0.6074
402 Y C -0.4823
403 K C -0.7205
404 T C -0.4787
405 T C 0.0000
406 P C -0.0975
407 P C 0.1515
408 V C 0.5917
409 L C 0.9360
410 D C -0.4178
411 S C -1.1326
412 D C -1.9071
413 G C -0.8396
414 S C 0.0000
415 F C 0.2496
416 F C 0.0000
417 L C 0.0000
418 Y C 0.0000
419 S C 0.0000
420 K C 0.0000
421 L C 0.0000
422 T C -0.8057
423 V C 0.0000
424 D C -2.9137
425 K C -2.8763
426 S C -2.3097
427 R C -2.0759
428 W C 0.0000
429 Q C -2.1843
430 Q C -1.9954
431 G C -1.0327
432 N C -0.7009
433 V C 0.3902
434 F C 0.0000
435 S C 0.0000
436 C C 0.0000
437 S C 0.0000
438 V C 0.0000
439 M C 0.0000
440 H C 0.0000
441 E C -1.1258
442 A C -1.5259
443 L C 0.0000
444 H C -1.8502
445 N C -1.4646
446 H C -0.9876
447 Y C -0.5845
448 T C 0.0000
449 Q C -1.0414
450 K C -1.0020
451 S C -0.4175
452 L C 0.0000
453 S C -0.0362
454 L C -0.2706
455 S C -0.5685
456 P C -1.2267
457 G C -1.4216
458 K C -2.0308
1 Q D -1.5345
2 V D -1.1477
3 Q D -1.5918
4 L D 0.0000
5 Q D -1.7351
6 Q D 0.0000
7 S D -0.9006
8 G D -0.6306
9 P D -0.3648
10 G D -0.4027
11 L D -0.3405
12 V D 0.0000
13 K D -2.0879
14 P D -1.6427
15 S D -1.3718
16 Q D -1.8364
17 T D -1.3081
18 L D 0.0000
19 S D -0.7556
20 L D 0.0000
21 T D -0.7573
22 C D 0.0000
23 A D -1.1168
24 I D 0.0000
25 S D -1.2300
26 G D -1.2622
27 D D -1.0910
28 S D -0.6098
29 V D 0.0000
30 S D 0.0806
31 S D 0.1734
32 Y D 0.7385
33 N D -0.6808
34 A D 0.0000
35 V D 0.1510
36 W D 0.0000
37 N D 0.0000
38 W D 0.0000
39 I D 0.0000
40 R D 0.0000
41 Q D -0.6174
42 S D -1.0952
43 P D -0.9265
44 S D -1.5124
45 R D -2.5705
46 G D -1.5845
47 L D 0.0000
48 E D -1.1101
49 W D 0.0000
50 L D 0.0000
51 G D 0.0000
52 R D -0.5374
53 T D 0.0000
54 Y D 0.4467
55 Y D 0.7718
56 R D 0.2299
57 S D 0.0463
58 G D 0.2364
59 W D 0.5841
60 Y D 0.4998
61 N D -0.6220
62 D D -1.3102
63 Y D -1.4692
64 A D -1.6449
65 E D -2.4870
66 S D -1.5149
67 V D 0.0000
68 K D -2.2521
69 S D -1.3977
70 R D -1.3930
71 I D 0.0000
72 T D -1.1433
73 I D 0.0000
74 N D -1.4647
75 P D -1.1474
76 D D -1.4606
77 T D -1.2172
78 S D -1.3077
79 K D -2.1578
80 N D -1.5942
81 Q D -1.4512
82 F D 0.0000
83 S D -0.8326
84 L D 0.0000
85 Q D -1.0374
86 L D 0.0000
87 N D -1.2271
88 S D -1.2208
89 V D 0.0000
90 T D -1.3550
91 P D -1.4406
92 E D -2.1883
93 D D 0.0000
94 T D -0.6152
95 A D 0.0000
96 V D 0.2196
97 Y D 0.0000
98 Y D 0.0000
99 C D 0.0000
100 A D 0.0000
101 R D 0.0000
102 S D 0.0000
103 G D 0.0000
104 H D -0.5346
105 I D -0.1315
106 T D 0.6438
107 V D 1.5239
108 F D 2.2796
109 G D 1.2789
110 V D 1.8834
111 N D 0.1673
112 V D 0.0000
113 D D -0.3459
114 A D 0.0000
115 F D 0.0000
116 D D -0.6025
117 M D -0.5611
118 W D 0.0000
119 G D 0.0000
120 Q D -1.9606
121 G D -1.0702
122 T D -0.3577
123 M D 0.0844
124 V D 0.0000
125 T D 0.0000
126 V D 0.0000
127 S D -0.7712
128 S D -0.8603
129 A D -0.5426
130 S D -0.6244
131 T D -0.7437
132 K D -1.1642
133 G D -1.2916
134 P D 0.0000
135 S D -0.2371
136 V D 0.0000
137 F D 0.0000
138 P D -1.0778
139 L D 0.0000
140 A D -1.2182
141 P D 0.0000
142 S D -0.7895
143 S D -0.6682
144 K D -0.7977
145 S D 0.0000
146 T D -0.4392
147 S D -0.0594
148 G D 0.0996
149 G D -0.2314
150 T D -0.0761
151 A D 0.0000
152 A D 0.0000
153 L D 0.0000
154 G D 0.0000
155 C D 0.0000
156 L D 0.0000
157 V D 0.0000
158 K D 0.0000
159 D D -0.3499
160 Y D 0.0000
161 F D 0.0000
162 P D 0.0000
163 E D -0.4405
164 P D -0.6656
165 V D -0.6642
166 T D -0.5687
167 V D -0.3473
168 S D -0.3567
169 W D 0.0000
170 N D -0.7040
171 S D -0.5827
172 G D -0.3332
173 A D -0.1428
174 L D 0.0675
175 T D -0.0487
176 S D 0.0000
177 G D 0.0000
178 V D 0.3678
179 H D 0.0000
180 T D 0.0789
181 F D 0.0000
182 P D -0.1950
183 A D 0.2357
184 V D 0.5220
185 L D 1.1442
186 Q D 0.2845
187 S D -0.0706
188 S D -0.2110
189 G D 0.0308
190 L D 0.1372
191 Y D 0.4380
192 S D 0.0000
193 L D 0.0000
194 S D 0.0000
195 S D 0.0000
196 V D 0.0000
197 V D 0.0000
198 T D 0.0000
199 V D 0.0000
200 P D -0.6182
201 S D -0.3067
202 S D -0.6346
203 S D 0.0000
204 L D -0.7082
205 G D -0.9282
206 T D -0.6572
207 Q D -1.0876
208 T D -1.0682
209 Y D 0.0000
210 I D -1.2857
211 C D 0.0000
212 N D -1.4786
213 V D 0.0000
214 N D -1.8675
215 H D 0.0000
216 K D -2.7014
217 P D -1.5852
218 S D -1.8016
219 N D -2.5653
220 T D -2.0338
221 K D -2.6703
222 V D -1.6343
223 D D -2.5625
224 K D -2.2188
225 K D -2.5500
226 V D 0.0000
227 E D -2.8679
228 P D -1.7672
229 K D -2.4120
230 S D -1.7009
231 C D -1.3514
232 D D -2.6321
233 K D -2.7388
234 T D -1.8199
235 H D -1.6804
236 T D -1.1598
237 C D -0.4358
238 P D -0.3302
239 P D -0.1986
240 C D 0.0935
241 P D -0.4428
242 A D -0.1907
243 P D -0.4429
244 E D -0.8455
245 L D 0.1053
246 L D 0.9175
247 G D -0.0145
248 G D -0.2815
249 P D 0.0000
250 S D 0.1067
251 V D 0.0000
252 F D 0.4829
253 L D 0.4990
254 F D 0.3461
255 P D -0.2494
256 P D 0.0000
257 K D -1.1090
258 P D -1.0063
259 K D -0.6630
260 D D -0.5909
261 T D 0.0000
262 L D 0.0000
263 M D 0.5261
264 I D 1.6068
265 S D 0.5098
266 R D -0.1626
267 T D -0.1116
268 P D 0.0000
269 E D -0.8541
270 V D 0.0000
271 T D -0.2076
272 C D 0.0000
273 V D 0.0000
274 V D 0.0000
275 V D 0.0000
276 D D -0.4201
277 V D 0.0000
278 S D -1.5972
279 H D -1.7623
280 E D -2.6856
281 D D -2.3962
282 P D -2.4409
283 E D -3.0480
284 V D -2.0308
285 K D -2.2424
286 F D -1.2672
287 N D -0.8983
288 W D 0.0000
289 Y D -0.3971
290 V D -0.5775
291 D D -1.7099
292 G D -0.6517
293 V D 0.7412
294 E D -0.5515
295 V D -0.5216
296 H D -1.8632
297 N D -2.1659
298 A D -1.8666
299 K D -2.4185
300 T D -1.9298
301 K D -2.0598
302 P D -1.9243
303 R D -2.6453
304 E D -2.0653
305 E D -1.3346
306 Q D 0.0000
307 Y D 0.0739
308 N D 0.0000
309 S D 0.0000
310 T D 0.0000
311 Y D 0.0000
312 R D -1.2966
313 V D 0.0000
314 V D 0.0000
315 S D 0.0000
316 V D 0.0000
317 L D 0.0000
318 T D -0.6337
319 V D 0.0000
320 L D 0.6992
321 H D 0.0748
322 Q D -0.8252
323 D D -1.2401
324 W D 0.0000
325 L D -1.0667
326 N D -1.9234
327 G D 0.0000
328 K D -1.8314
329 E D -1.5969
330 Y D 0.0000
331 K D -0.6407
332 C D 0.0000
333 K D -0.7196
334 V D 0.0000
335 S D -1.3722
336 N D 0.0000
337 K D -2.5911
338 A D -1.5667
339 L D 0.0000
340 P D -1.0067
341 A D 0.0000
342 P D -0.7696
343 I D 0.0000
344 E D 0.0000
345 K D -0.0908
346 T D -0.3658
347 I D -0.0475
348 S D -1.0130
349 K D -1.2944
350 A D -1.2750
351 K D -2.3053
352 G D -1.9395
353 Q D -2.0896
354 P D -1.6969
355 R D -1.9091
356 E D -2.4064
357 P D 0.0000
358 Q D -1.0381
359 V D 0.0000
360 Y D 0.0000
361 T D -0.7740
362 L D 0.0000
363 P D -0.3964
364 P D -0.9286
365 S D -1.5294
366 R D -2.7510
367 D D -2.8077
368 E D 0.0000
369 L D -1.9441
370 T D -1.6881
371 K D -2.5574
372 N D -2.7618
373 Q D -2.7704
374 V D 0.0000
375 S D 0.0000
376 L D 0.0000
377 T D 0.0000
378 C D 0.0000
379 L D 0.0000
380 V D 0.0000
381 K D -0.4903
382 G D -0.9850
383 F D 0.0000
384 Y D -1.1546
385 P D 0.0000
386 S D -0.5993
387 D D -1.5715
388 I D -0.7096
389 A D -0.4814
390 V D 0.0000
391 E D -0.8169
392 W D 0.0000
393 E D -1.2990
394 S D -1.2048
395 N D -1.8270
396 G D -1.6354
397 Q D -1.9670
398 P D -1.3206
399 E D 0.0000
400 N D -0.8192
401 N D -0.7545
402 Y D -0.6086
403 K D -0.8025
404 T D -0.4937
405 T D 0.0000
406 P D -0.1944
407 P D -0.1462
408 V D 0.0000
409 L D 0.3081
410 D D -0.7249
411 S D -1.2414
412 D D -2.0191
413 G D -1.0402
414 S D 0.0000
415 F D -0.1286
416 F D 0.0000
417 L D 0.0000
418 Y D 0.0000
419 S D 0.0000
420 K D 0.0000
421 L D 0.0000
422 T D -0.8710
423 V D 0.0000
424 D D -2.9425
425 K D -3.0304
426 S D -2.5030
427 R D -2.3843
428 W D 0.0000
429 Q D -2.5653
430 Q D -2.3312
431 G D -1.4307
432 N D -1.2740
433 V D 0.0904
434 F D 0.0000
435 S D 0.0000
436 C D 0.0000
437 S D 0.0000
438 V D 0.0000
439 M D 0.0000
440 H D 0.0000
441 E D -1.1673
442 A D -1.5076
443 L D 0.0000
444 H D -1.8094
445 N D -1.4487
446 H D -0.9178
447 Y D -0.4878
448 T D -0.6793
449 Q D -0.9845
450 K D -0.9771
451 S D -0.4228
452 L D 0.0000
453 S D -0.2577
454 L D -0.4615
455 S D -0.6650
456 P D -1.2829
457 G D -1.4225
458 K D -2.0328
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Calculations for various pH values

This page contains details and comparisons for all models calculated at different pH points.
Please find suggestions on interpreting the results below. More details can be found in the Tutorial.
The input structure is globular. Max score is recommended for pH analysis.

pH
Average A4D Score
Max A4D Score
4.0 -0.6824 4.7317 View CSV PDB
4.5 -0.7251 4.7317 View CSV PDB
5.0 -0.7742 4.7317 View CSV PDB
5.5 -0.819 4.7317 View CSV PDB
6.0 -0.8484 4.7317 View CSV PDB
6.5 -0.8547 4.7317 View CSV PDB
7.0 -0.8391 4.7317 View CSV PDB
7.5 -0.8097 4.7317 View CSV PDB
8.0 -0.7729 4.7317 View CSV PDB
8.5 -0.7305 4.7317 View CSV PDB
9.0 -0.6826 4.7317 View CSV PDB